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2021 ◽  
pp. 94-101
Author(s):  
S.V. Cherednichenko

The history of establishing the museum of the Ilmeny State Reserve in the South Urals is described during 1924–1941. Information about the location of the museum, the number of samples and exhibi¬tions in various years is given. During 1926–1930, when the reserve was headed by the director D.I. Rudenko, the frst collections of the museum were stored in a building on Remeslennaya street in Miass. In 1931–1936, the museum was located in apartments of the central base of the reserve. The location of the museum in the South Urals Mountain Station of the Academy of Sciences from 1937 to 1941 was fruitful.


Author(s):  
Samera Ibrahim Kadum Al-Addal

Innovation has two key levers: the capacity to consider and predict consumer desires, on the one hand, and the building of collaboration between the economic environment, metropolitan players, and knowledge and development actors, somewhere else. Innovation is not just technical, and it disrupts traditions and station partners' aspirations and perceptions: planners, administrators, consumers or clients, and causes a change in locations and uses. The expansion of the rail network in Iraq is renewing station sites, especially in Iraq, which, at the cost of medium-sized cities between these cities, prefer the logic of productivity-focused on express services between major cities. On the field, this alternative translates into two styles of stations that are central base stations for significant towns, and medium- and small-town terminals—establishing stations benefits from an interconnected phase of all spatial organization types. Suppose we research the decision phase that led to the establishment of train stations in Iraq. In that case, we find that this option and construction strategies are a mixture of component elements according to the area details served and actors' strategies. Most chosen sites result from deep relationships between global, regional, and local reasoning.


2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Yanjiao Wang ◽  
Ge Han ◽  
Xiuying Jiang ◽  
Tairan Yuwen ◽  
Yi Xue

AbstractNH groups in proteins or nucleic acids are the most challenging target for chemical shift prediction. Here we show that the RNA base pair triplet motif dictates imino chemical shifts in its central base pair. A lookup table is established that links each type of base pair triplet to experimental chemical shifts of the central base pair, and can be used to predict imino chemical shifts of RNAs to remarkable accuracy. Strikingly, the semiempirical method can well interpret the variations of chemical shifts for different base pair triplets, and is even applicable to non-canonical motifs. This finding opens an avenue for predicting chemical shifts of more complicated RNA motifs. Furthermore, we combine the imino chemical shift prediction with NMR relaxation dispersion experiments targeting both 15N and 1HN of the imino group, and verify a previously characterized excited state of P5abc subdomain including an earlier speculated non-native G•G mismatch.


2020 ◽  
Vol 10 (8) ◽  
pp. 2641-2652
Author(s):  
Helmut Simon ◽  
Gavin Huttley

We report work to quantify the impact on the probability of human genome polymorphism both of recombination and of sequence context at different scales. We use population-based analyses of data on human genetic variants obtained from the public Ensembl database. For recombination, we calculate the variance due to recombination and the probability that a recombination event causes a mutation. We employ novel statistical procedures to take account of the spatial auto-correlation of recombination and mutation rates along the genome. Our results support the view that genomic diversity in recombination hotspots arises largely from a direct effect of recombination on mutation rather than predominantly from the effect of selective sweeps. We also use the statistic of variance due to context to compare the effect on the probability of polymorphism of contexts of various sizes. We find that when the 12 point mutations are considered separately, variance due to context increases significantly as we move from 3-mer to 5-mer and from 5-mer to 7-mer contexts. However, when all mutations are considered in aggregate, these differences are outweighed by the effect of interaction between the central base and its immediate neighbors. This interaction is itself dominated by the transition mutations, including, but not limited to, the CpG effect. We also demonstrate strand-asymmetry of contextual influence in intronic regions, which is hypothesized to be a result of transcription coupled DNA repair. We consider the extent to which the measures we have used can be used to meaningfully compare the relative magnitudes of the impact of recombination and context on mutation.


2020 ◽  
Author(s):  
Helmut Simon ◽  
Gavin Huttley

ABSTRACTWe report work to quantify the impact on the probability of human genome polymorphism both of recombination and of sequence context at different scales. We use population-based analyses of data on human genetic variants obtained from the public Ensembl database. For recombination, we calculate the variance due to recombination and the probability that a recombination event causes a mutation. We employ novel statistical procedures to take account of the spatial auto-correlation of recombination and mutation rates along the genome. Our results support the view that genomic diversity in recombination hotspots arises from a direct effect of recombination on mutation rather than from the effect of selective sweeps. We also use the statistic of variance due to context to compare the effect on the probability of polymorphism of contexts of various sizes. We find that when the 12 point mutations are considered separately, variance due to context increases significantly as we move from 3-mer to 5-mer and from 5-mer to 7-mer contexts. However, when all mutations are considered in aggregate, these differences are outweighed by the effect of interaction between the central base and its immediate neighbors. This interaction is itself dominated by the transition mutations, including, but not limited to, the CpG effect. We also demonstrate strand-asymmetry of contextual influence in intronic regions, which is hypothesized to be a result of transcription coupled DNA repair. We consider the extent to which the measures we have used can be used to meaningfully compare the relative magnitudes of the impact of recombination and context on mutation.


2019 ◽  
Vol 47 (22) ◽  
pp. 11943-11955 ◽  
Author(s):  
Anton Slyvka ◽  
Evelina Zagorskaitė ◽  
Honorata Czapinska ◽  
Giedrius Sasnauskas ◽  
Matthias Bochtler

Abstract EcoKMcrA from Escherichia coli restricts CpG methylated or hydroxymethylated DNA, and may act as a barrier against host DNA. The enzyme consists of a novel N-terminal specificity domain that we term NEco, and a C-terminal catalytic HNH domain. Here, we report that NEco and full-length EcoKMcrA specificities are consistent. NEco affinity to DNA increases more from hemi- to full-methylation than from non- to hemi-methylation, indicating cooperative binding of the methyl groups. We determined the crystal structures of NEco in complex with fully modified DNA containing three variants of the Y5mCGR EcoKMcrA target sequence: C5mCGG, T5mCGA and T5hmCGA. The structures explain the specificity for the two central base pairs and one of the flanking pairs. As predicted based on earlier biochemical experiments, NEco does not flip any DNA bases. The proximal and distal methyl groups are accommodated in separate pockets. Changes to either pocket reduce DNA binding by NEco and restriction by EcoKMcrA, confirming the relevance of the crystallographically observed binding mode in solution.


2019 ◽  
Vol 12 (11) ◽  
pp. e232022
Author(s):  
Samuel Robert Leedman ◽  
Aaron Esmaili ◽  
Tejinder Singh ◽  
Desmond Wee

We present a case of a 61-year-old woman who suffered a haemorrhagic complication of an aneurysmal left lingual artery, secondary to fibromuscular dysplasia, following transoral robotic surgery (TORS). She was admitted through the emergency department 3 days after resection of a central base of tongue tumour. She suffered a massive haemorrhage requiring intensive care admission, blood transfusion, intubation, operative and endovascular intervention. The diagnosis of fibromuscular dysplasia was made at angiography. During attempts to embolise the culprit left lingual artery, the vessel dissected at its origin leading to arrest of bleeding. Repeat angiograms during her admission demonstrated unchanged appearances and ruled out recanalisation of the vessel. She was extubated and remained stable on the ward, discharged home some days later in good health. To our knowledge, this is the first ever reported case of fibromuscular dysplasia affecting the lingual artery leading to aneurysmal dilation and severe haemorrhage following TORS.


Author(s):  
Burak Sakaci ◽  
Tulay Yildirim

In this study, a system was established to provide interactive communication among the 9 military personnel through the equipment installed in their bodies. This communication is also provided so that it can be viewed by a specific central base and intervened if necessary. Interpretation of the realized cyber-physical system data is aimed at preventing the existing problems.


2018 ◽  
Author(s):  
Francis Deng ◽  
Frank Gaillard
Keyword(s):  

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