Journal of Biomedical Graphics and Computing
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Published By Sciedu Press

1925-4016, 1925-4008

2018 ◽  
Vol 8 (1) ◽  
pp. 29 ◽  
Author(s):  
Ryo Hasegawa ◽  
Takashi Kimura ◽  
Tadao Tanabe ◽  
Katsuhiro Nishihara ◽  
Akira Taniyama ◽  
...  

Steel sheet with an insulator to prevent corrosion is used for various purposes including in building and car manufacture. Terahertz waves, for which insulators are highly permeable and metal surfaces are highly reflective, have been studied in order to establish a new inspection technology for these steel plates. In our previous research, spectroscopic measurements in the 1.0-4.0 THz range, generated by a GaP crystal, were carried out in order to collect information on the infrared activity of the metal corrosion products formed on Zn-Al hot-dip galvanized steel sheet. In the previous work, the infrared activity of Fe-based corrosion products was not examined. To examine these products, we conducted THz spectroscopy on goethite (α-FeOOH) in the range from 8.4 to 11.0 THz, generated by a GaSe crystal. The results of Attenuated Total Reflectance (ATR) FTIR spectral measurements and molecular vibration calculations were analyzed, on the basis of which the natural vibration modes of α-FeOOH in the THz frequency range were assigned.


2018 ◽  
Vol 8 (1) ◽  
pp. 14
Author(s):  
Jon D. Klingensmith ◽  
Saygin Sop ◽  
Mete Naz ◽  
Maria Fernandez-del-Valle ◽  
H. Felix Lee

Objective: The layer of fat that accumulates around the heart, called cardiac adipose tissue (CAT), can influence the development of coronary disease and is indicative of cardiovascular risk. While volumetric assessment of magnetic resonance imaging (MRI) can quantify CAT, volume alone gives no information about its distribution across the myocardial surface, which may be an important factor in risk assessment. In this study, a three-dimensional (3D) modeling technique is developed and used to quantify the distribution of the CAT across the surface of the heart.Methods: Dixon MRI scans, which produce a registered 3D set of fat-only and water-only images, were acquired in 10 subjects for a study on exercise intervention. A previously developed segmentation algorithm was used to identify the heart and CAT. Extracted contours were used to build 3D models. Procrustes analysis was used to register the heart models and an iterative closest point algorithm was used to register and align the CAT models for calculation of CAT thickness. Rays were cast in directions specified by a spherical parameterization of elevation and azimuthal angles, and intersections of the ray with the CAT surface were used to calculate the thickness at each location. To evaluate the effects of the spherical parameterization on the thickness estimates, a set of synthetic models were created with increasing major-to-minor axis ratios.Results: Based on the validation in the synthetic models, the average error in CAT thickness ranged from 1.25% to 17.3% for increasing major-to-minor axis ratio.Conclusions: A process was developed, based on Dixon MRI data, to provide 3D models of the myocardial surface and the cardiac fat. The models can be used in future segmentation algorithm development and for studies on changes in cardiac fat as a result of various interventions.


2017 ◽  
Vol 8 (1) ◽  
pp. 1 ◽  
Author(s):  
Jon D. Klingensmith ◽  
Addison L. Elliott ◽  
Maria Fernandez-del-Valle ◽  
Sunanda Mitra

Objective: Increasing evidence suggests a strong link between excess cardiac adipose tissue (CAT) and the risk of a cardiovascular event. Multi-echo Dixon magnetic resonance imaging (MRI), providing fat-only and water-only images, is a useful tool for quantification but requires the segmentation of CAT from a large number of images. The intent of this study was to evaluate an automated technique for CAT segmentation from Dixon MRI by comparing the contours identified by the automated algorithm to those manually traced by an observer. Methods: An automated segmentation algorithm, based on optimal thresholds and custom morphological processing, was applied to the registered fat-only and water-only images to identify CAT in the volume scans. CAT contours in 446 images, from 10 MRI scans, were selected for validation analysis. Cross-sectional area (CSA) and volume were computed and compared using Bland-Altman analysis. In addition, Hausdorff distance and Dice Similarity Coefficient (DSC) were used for assessment.Results: Linear regression analysis yielded correlation of R2 = 0.381 for CSA and R2 = 0.879 for volume. When compared to the observer, the computer algorithm under-estimated CSA by 27.5 ± 40.0% and volume by 26.4 ± 10.4%. The average bidirectional Hausdorff distance was 26.2 ± 16.0 mm while the average unidirectional Hausdorff distances were 24.5 ± 15.7 mm and 12.4 ± 11.7 mm. The average DSC was 0.561 ± 0.100. The time required for manual tracing was 15.84 ± 3.73 min and the time required for the computer algorithm was 2.81 ± 0.12 min.Conclusions: This study provided a technique, faster and less tedious than manual tracing (p < 0.00001), for quantification of CAT in Dixon MRI data, demonstrating feasibility of this approach for cardiac risk stratification.


2017 ◽  
Vol 7 (1) ◽  
pp. 13
Author(s):  
Nguessan Judicael Ahoury ◽  
Salami Fatima Adéniké ◽  
Ndja Ange Patrick ◽  
Cavez Nicolas ◽  
Kouassi Paul Nzi

Nutcracker syndrome includes all the symptoms associated with the narrowing of the left renal vein (LRV). That narrowing occurs between the aorta and the Superior Mesenteric Artery (anterior) or vertebra (posterior). The symptoms are various and not specific but the patient sometimes presents hematuria with or without left flank pain. We report a case on a 42 years old woman, who was suffering from left flank pain for a long time aggravated during and after each pregnancy. The diagnosis of nutcracker syndrome was initially omitted. Abdominal pelvic Angio CT and venography were performed. We placed a percutaneous stent in the narrowed portion of the renal vein. The result was successful.


2017 ◽  
Vol 7 (1) ◽  
pp. 8
Author(s):  
China Blue ◽  
Seth S. Horowitz ◽  
Peter J. Snyder

Abnormally high levels of neocortical beta-amyloid protein (A+) reflect Alzheimer’s disease (AD) pathology in persons with clinical evidence of dementia or mild cognitive impairment (MCI). The abnormal aggregation of beta-amyloid protein in the brain neuropil may lead to either diffuse plaques and/or concentrated neuritic plaques, with the latter form of deposits often present in the vicinity of the cerebral microvasculature. The A protein, with its crystalline molecular structure, infiltrates the vessel walls and compromises the blood-brain barrier (BBB). The physical basis for this was elegantly shown by Meyer and colleagues, in a 2008 publication showing two-dimensional (2D) confocal laser scanning microscopic imaging of vascular A protein deposits in APP23 transgenic mice. These investigators showed accumulations of “tuft-life structures”, also referred to as “pompons” with protruding spikes on – and embedded within – microvessels. These pompons of beta-amyloid protein “consist of fibrillar structures, [and] can encircle and constrict capillaries, and are often associated with distortion of capillaries”.We were struck by both the heuristic value of the imaging of Meyer and colleagues, in explaining the root cause of both the amyloid-related alterations in the vascular bed, and depicting minute protein deposits that are both geometrically complex, seemingly delicate and fragile, and yet tenacious in their embedding within small vessel walls. We re-created these images with standard 3D printing technology (extruded plastic) for both educational/teaching and artistic purposes.


2017 ◽  
Vol 7 (1) ◽  
pp. 1 ◽  
Author(s):  
Joseph V. Rispoli ◽  
Steven M. Wright ◽  
Craig R. Malloy ◽  
Mary P. McDougall

Background: Human voxel models incorporating detailed anatomical features are vital tools for the computational evaluation of electromagnetic (EM) fields within the body. Besides whole-body human voxel models, phantoms representing smaller heterogeneous anatomical features are often employed; for example, localized breast voxel models incorporating fatty and fibroglandular tissues have been developed for a variety of EM applications including mammography simulation and dosimetry, magnetic resonance imaging (MRI), and ultra-wideband microwave imaging. However, considering wavelength effects, electromagnetic modeling of the breast at sub-microwave frequencies necessitates detailed breast phantoms in conjunction with whole-body voxel models.Methods: Heterogeneous breast phantoms are sized to fit within radiofrequency coil hardware, modified by voxel-wise extrusion, and fused to whole-body models using voxel-wise, tissue-dependent logical operators. To illustrate the utility of this method, finite-difference time-domain simulations are performed using a whole-body model integrated with a variety of available breast phantoms spanning the standard four tissue density classifications representing the majority of the population.Results: The software library uses a combination of voxel operations to seamlessly size, modify, and fuse eleven breast phantoms to whole-body voxel models. The software is publicly available on GitHub and is linked to the file exchange at MATLAB R Central. Simulations confirm the proportions of fatty and fibroglandular tissues in breast phantoms have significant yet predictable implications on projected power deposition in tissue.Conclusions: Breast phantoms may be modified and fused to whole-body voxel models using the software presented in this work; user considerations for the open-source software and resultant phantoms are discussed. Furthermore, results indicate simulating breast models as predominantly fatty tissue can considerably underestimate the potential for tissue heating in women with substantial fibroglandular tissue.


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