Use of RNA amplification in the optimal characterization of global gene expression using cDNA microarrays

2004 ◽  
Vol 201 (3) ◽  
pp. 359-365 ◽  
Author(s):  
Radka Stoyanova ◽  
John J. Upson ◽  
Christos Patriotis ◽  
Eric A. Ross ◽  
Elizabeth P. Henske ◽  
...  
2020 ◽  
Vol 9 (7) ◽  
pp. 2066
Author(s):  
Luis León-Mateos ◽  
Alicia Abalo ◽  
Helena Casas ◽  
Urbano Anido ◽  
Óscar Rapado-González ◽  
...  

Background: Current therapeutic options in the course of metastatic castration-resistant prostate cancers (mCRPC) reinforce the need for reliable tools to characterize the tumor in a dynamic way. Circulating tumor cells (CTCs) have emerged as a viable solution to the problem, whereby patients with a variety of solid tumors, including PC, often do not have recent tumor tissue available for analysis. The biomarker characterization in CTCs could provide insights into the current state of the disease and an overall picture of the intra-tumor heterogeneity. Methods: in the present study, we applied a global gene expression characterization of the CTC population from mCRPC (n = 9), with the goal to better understand the biology of these cells and identify the relevant molecules favoring this tumor progression. Results: This analysis allowed the identification of 50 genes specifically expressed in CTCs from patients. Six of these markers (HOXB13, QKI, MAOA, MOSPD1, SDK1, and FGD4), were validated in a cohort of 28 mCRPC, showing clinical interest for the management of these patients. Of note, the activity of this CTC signature was related to the regulation of MYC, a gene strongly implicated in the biology of mCRPC. Conclusions: Overall, our results represent new evidence on the great value of CTCs as a non-invasive biopsy to characterize PC.


2007 ◽  
Vol 8 (9) ◽  
pp. R191 ◽  
Author(s):  
Martin Buess ◽  
Dimitry SA Nuyten ◽  
Trevor Hastie ◽  
Torsten Nielsen ◽  
Robert Pesich ◽  
...  

BMC Genomics ◽  
2009 ◽  
Vol 10 (1) ◽  
pp. 35 ◽  
Author(s):  
Soken Tsuchiya ◽  
Yuki Tachida ◽  
Eri Segi-Nishida ◽  
Yasushi Okuno ◽  
Shigero Tamba ◽  
...  

2003 ◽  
Vol 162 (4) ◽  
pp. 1151-1162 ◽  
Author(s):  
Christine A. Iacobuzio-Donahue ◽  
Anirban Maitra ◽  
Mari Olsen ◽  
Anson W. Lowe ◽  
N. Tjarda Van Heek ◽  
...  

PLoS ONE ◽  
2013 ◽  
Vol 8 (1) ◽  
pp. e53391 ◽  
Author(s):  
Paul Martijn den Reijer ◽  
Nicole Lemmens-den Toom ◽  
Samantha Kant ◽  
Susan V. Snijders ◽  
Hélène Boelens ◽  
...  

2011 ◽  
Vol 62 (11) ◽  
pp. 3837-3848 ◽  
Author(s):  
Barek Tamasloukht ◽  
Mary Sarah-Jane Wong Quai Lam ◽  
Yves Martinez ◽  
Koffi Tozo ◽  
Odile Barbier ◽  
...  

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