Differences in physical habitat simulation system modelling results using benthic or pelagic fish species as indicators in Peruvian Andes–Amazon rivers

2020 ◽  
Vol 36 (5) ◽  
pp. 828-842
Author(s):  
Eduardo Oyague ◽  
Adrián Vera ◽  
Lucía Cabrejos ◽  
Pablo Franco
Keyword(s):  
Fish Species ◽  
Pelagic Fish ◽  
Simulation System ◽  
System Modelling ◽  
Physical Habitat ◽  
Peruvian Andes ◽  
Habitat Simulation

scholarly journals Application of the physical habitat simulation for fish species to assess environmental flows in an Atlantic Forest Stream in South-eastern Brazil

2015 ◽  
Vol 13 (4) ◽  
pp. 685-698 ◽  
Author(s):  
Marcus Rodrigues da Costa ◽  
Tailan Moretti Mattos ◽  
Victor Hugo Fernandes ◽  
Francisco Martínez-Capel ◽  
Rafael Muñoz-Mas ◽  
...  
Keyword(s):  
Atlantic Forest ◽  
Fish Species ◽  
Habitat Suitability ◽  
Environmental Flows ◽  
Southeastern Brazil ◽  
Microhabitat Use ◽  
Physical Habitat ◽  
Forest Stream ◽  
Habitat Simulation ◽  
Target Fish

ABSTRACT The physical habitat simulation sub-routine of the Instream Flow Incremental Methodology (IFIM) uses hydraulic modeling and suitability indices of target fish species to predict how differences in-stream flows affect the microhabitat occupation by fish species. This habitat modelling approach was adopted to assess the ecological effects of running flows on three neotropical fish species of different orders (Bryconamericus ornaticeps , Ancistrus multispinis and Geophagus brasiliensis ).The study encompassed two reaches of an Atlantic Forest stream in Southeastern Brazil where topographic and hydraulic (depth, velocity and type of substrate) characteristics were measured to implement one-dimensional hydraulic simulation. Sub aquatic observation of fish was performed to collect data on microhabitat use and these data were used to develop habitat suitability curves that were used in the habitat simulation to obtain the habitat suitability index (HSI) and weighted usable area (WUA) versus flow curves. Upon these curves minimum and optimum environmental flows for the target fish species were proposed. Bryconamericus ornaticeps and A. multispinis selected microhabitats around 0.6 m depth, whereas G. brasiliensis showed a wider suitable range (0.35-0.9 m). All the three species were mainly observed in microhabitat with low flow velocity (0.1 m/s). Bryconamericus ornaticeps selected more frequently coarse substrate (e.g. boulders) but it appeared also over sandy substrate, whereas A. multispinis and G. brasiliensis selected preferably boulders. The range of 0.65-0.85 m3/s was found as the optimum to meet the needs of the three fish species. Our results agree with the necessary objective information to perform grounded management actions in the frame of a management program aiming at ecosystem conservation. Thereby it can be considered a successful pilot study in environmental flow assessment in an Atlantic Forest stream of Brazil.

Relationship between chinook salmon (Oncorhynchus tshawytscha) redd densities and PHABSIM-predicted habitat in the Merced and Lower American rivers, California

1999 ◽  
Vol 56 (4) ◽  
pp. 570-577 ◽  
Author(s):  
Sean P Gallagher ◽  
Mark F Gard
Keyword(s):  
Fisheries Management ◽  
Chinook Salmon ◽  
Significant Relationship ◽  
Oncorhynchus Tshawytscha ◽  
Simulation System ◽  
Physical Habitat ◽  
Instream Flow ◽  
Spawning Habitat ◽  
Habitat Simulation

An index of chinook salmon (Oncorhynchus tshawytscha) spawning habitat predicted using the physical habitat simulation system (PHABSIM) component of the instream flow incremental methodology was compared with redd densities and locations for sites in the Merced River, California, during 1996 and with redd numbers in sites in the Merced and Lower American rivers, California, from 1989 through 1996. Predicted weighted useable area (WUA) was significantly correlated with chinook salmon spawning density and location at five of seven sites in the Merced River. At the microhabitat level, in the Merced River during 1996, there was a significant relationship between chinook salmon redd location and predicted WUA. Cells with more WUA in the Merced River tended to have more redds. At the mesohabitat level, there was a significant relationship between redd density and predicted WUA in both rivers. Transect areas in the Merced River with higher predicted WUA had more redds. Sites with higher numbers of redds had more predicted WUA. Significant correlations between predicted WUA and spawning locations increase confidence in the use of PHABSIM modeling results for fisheries management in the Merced and Lower American rivers as well as in other rivers.

scholarly journals Physical habitat simulation for small-sized characid fish species from tropical rivers in Brazil

2018 ◽  
Vol 16 (4) ◽  
Author(s):  
Hersília de Andrade e Santos ◽  
Cecília Gontijo Leal ◽  
Paulo Santos Pompeu ◽  
Ceceo Chaves ◽  
Stephanie Fernandes Cunha
Keyword(s):  
Fish Species ◽  
Generalized Additive Models ◽  
Environmental Flow ◽  
Additive Models ◽  
Physical Habitat ◽  
Traditional Methods ◽  
Neotropical Species ◽  
Habitat Simulation ◽  
Traditional Approaches

ABSTRACT Physical habitat simulation (PHABSIM) is an important step of the instream flow incremental methodology (IFIM), which is applied to establish environmental flow regimes. This study applied the PHABSIM in two reaches of the Velhas river basin, whose long-term discharges are similar but are under different degrees of impact. Suitability curves were obtained for fish species using traditional methods (Astyanax sp., Piabarchus stramineus, Piabina argentea and Serrapinnus heterodon) and generalized additive models for fish density (Astyanax sp., P. argentea and S. heterodon). The results of habitat use depended on the method for curves generation. Applying the suitability curves by traditional methods, different discharge scenarios were simulated. The flow increasing from a dry scenario to a discharge of 1 year of return promotes a possible habitat increase for all species. However, the same hydrological flow percentiles produce different habitat proportions in different rivers. This work demonstrates that regardless of how suitability curves for the Neotropical species are generated, caution should be taken when applying them. However, the PHABSIM method allows more complex analyses than the traditional approaches based on minimal flow estimations, which is usually applied in South America.

Habitat Elements in River Basin Management and Planning

1987 ◽  
Vol 19 (9) ◽  
pp. 19-29 ◽  
Author(s):  
Edwin E. Herricks ◽  
Maria I. Braga
Keyword(s):  
Water Quality ◽  
River Basin ◽  
River Basin Management ◽  
The United States ◽  
Physical Habitat ◽  
Basin Management ◽  
Habitat Analysis ◽  
Management Procedures ◽  
Habitat Simulation ◽  
Flow Quantity

Comprehensive river basin management mast move beyond narrowly focused programs dealing with water quantity or water quality. A more comprehensive approach to river basin management recognizes that both flow quantity and water quality can be summarized as habitat measures. A number of well developed physical habitat analysis and prediction procedures are presently available. Several computerized systems available from the U.S.Fish and Wildlife Service (Habitat Suitability Index - HSI and PHysical HABitat SIMulation - PHABSIM) provide macrohabitat definition. We have developed a water quality based habitat component which operates effectively for general analysis. With an emphasis on site specific management in the United States, the macrohabitat definition procedures may not meet all river basin management and planning requirements. This paper reviews the results of research which characterizes microhabitat in streams and rivers and provides a valuable extension to basin management procedures.

A new look on the morphometric characteristics of Congridae leptocephali from the southern Adriatic Sea

2021 ◽  
pp. 1-5
Author(s):  
M. Mandić ◽  
I. Leonori ◽  
A. De Felice ◽  
S. Gvozdenović ◽  
A. Pešić
Keyword(s):  
Fish Species ◽  
Adriatic Sea ◽  
Pelagic Fish ◽  
Morphometric Parameters ◽  
Morphological Features ◽  
Morphometric Characteristics ◽  
Small Pelagic Fish ◽  
Acoustic Surveys ◽  
Western Side ◽  
Conger Conger

Abstract Anguillid leptocephali of three Congridae species (Conger conger, Ariosoma balearicum and Gnathophis mistax) were caught as bycatch of pelagic trawls during acoustic surveys targeting small pelagic fish species in the southern Adriatic Sea, carried out under the framework of the Italian MEDIAS project (western side) and its extension in the ambit of the FAO AdriaMed project (eastern side). Results refer to the findings of Congridae leptocephali during surveys conducted in 2011, 2014, 2015 and 2016. A total of 25 specimens were caught and analysed (morphological features and pigmentation patterns). Leptocephali of Conger conger were found in the range of 8.4–13.1 cm total length (TL) (between 50 and 132 m depth), Ariosoma balearicum from 9.7–12.2 cm TL (between 50 and 128 m depth) and for Gnathophis mystax in the range from 6.4–11.7 cm TL (between 40 and 79 m depth). The results indicate that the southern Adriatic Pit could be the spawning area of these species in the Adriatic Sea. Present data represent a contribution to existing knowledge about the ecology of leptocephali from the Congridae family in the southern Adriatic Sea, and also indicate the existence of differences in morphometric parameters between different areas, that is, the possibility of the existence of new geographic lines within the genus Ariosoma in the Adriatic Sea.

scholarly journals Dominant Fish and Macroinvertebrate Response to Flow Changes of the Geum River in Korea

Water ◽  
2018 ◽  
Vol 10 (7) ◽  
pp. 942 ◽  
Author(s):  
Hyeongsik Kang ◽  
Byungwoong Choi
Keyword(s):  
Flow Patterns ◽  
Base Flow ◽  
Physical Habitat ◽  
Aquatic Species ◽  
Morphology Change ◽  
Suitability Index ◽  
Natural Flow ◽  
Habitat Simulation ◽  
Target Fish ◽  
The Impact

This study presents the impact of natural flow patterns on downstream aquatic species habitats in a reach of the Geum River, Korea. The study reach is a 13.4 km long, located downstream of the Yongdam Dam. To assess such an impact, this study performed physical habitat simulations. The River2D model was used for the computation of the flow field and morphology, and the Habitat Suitability Index (HSI) model for the habitat simulation. Three habitat variables—flow depth, velocity, and substrate were used. The Zacco platypus and Baetis fuscatus were selected as the target fish and benthic macro-invertebrate, respectively. Using the building block approach (BBA), the scenarios for modifying dam operations were constructed in the study reach. Scenario 1, scenario 2, and scenario 3 were proposed by using the magnitude–duration concept, base flow allocation concept, and seasonally adjusted minimum flow allocation concept, respectively. Simulation results indicated that the scenarios’ effects significantly increased by about 14.3% for the weighted usable area (WUA). In addition, the morphology change with the restoration of flood events was investigated. It was revealed that the morphology change in the physical habitat simulations further increased by about 13% for the WUA. The change of dam operations through natural flow patterns is more advantageous to aquatic species.

scholarly journals Use of Instream Structure Technique for Aquatic Habitat Formation in Ecological Stream Restoration

2018 ◽  
Vol 10 (11) ◽  
pp. 4032 ◽  
Author(s):  
Kidoo Park ◽  
Kil Lee ◽  
Young-Oh Kim
Keyword(s):  
Carassius Auratus ◽  
Physical Habitat ◽  
Stepping Stones ◽  
Environment Friendly ◽  
Storm Water Management Model ◽  
Instream Flows ◽  
Structural Measures ◽  
Habitat Simulation ◽  
Ecological Habitat ◽  
The Stability

Drought flow as the minimum flow rate required for restoration of the Mokgamcheon stream was calculated by the Storm Water Management Model (SWMM) V.5.0. The adequacy of drought flow to guarantee the minimum ecological environment was assessed using suitable low-flows not exceeding the maximum pollution concentration of the ecosystem calculated by Design FLOWs (DFLOW) V.4.1. Fish flows, which provide proper ecological habitat for fish, were calculated using Physical HABitat SIMulation (PHABSIM) V.1.5.2 to provide proper ecological habitat for target fishes such as Carassius auratus and Zacco platypus. The monthly expected instream flows were determined as the largest value between drought flow and fish flow. In most cases, instream flows were determined by drought flows exceeding fish flows that satisfy the condition of species habitat, but in the case of Carassius auratus, drought flows were less than fish flows in April, September, and October. Thus, structural measures for the supply of additional discharge were required. Instead, when natural environment-friendly instream structures, such as stepping stones were used, affordable ecological restoration that met the preferred conditions for discharge and depth of Carassius auratus was possible. The stepping stones were assessed using River2D V.0.95a to measure their effectiveness compared to other structural measures that would be costly and time-consuming to secure shortage of fish flow. Finally, the stability of the habitat was assessed through flood analysis; in case of a flood discharge of 5.2 m3/s obtained from time-series analysis, it was evaluated that the stability of habitats could be reasonable.

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