scholarly journals Computational modeling of gene structure in Arabidopsis thaliana

2002 ◽  
pp. 49-58
Author(s):  
Volker Brendel ◽  
Wei Zhu
2004 ◽  
Vol 2 (5) ◽  
pp. 401-415 ◽  
Author(s):  
Annaïck Mingam ◽  
Claire Toffano-Nioche ◽  
Véronique Brunaud ◽  
Nathalie Boudet ◽  
Martin Kreis ◽  
...  

2021 ◽  
Author(s):  
Yingqi Hong ◽  
Lv Yanxi ◽  
Zhang Jianyi ◽  
Nguyen Quoc Viet Hoang ◽  
Li Youbao ◽  
...  

Abstract BackgroundCysteine protease (CP) plays an important role in plant senescence. In this study, the whole genome evolution information of CPs was analyzed by using safflower, and the function of CtCP1 under l abiotic stress was analyzed.Results25 CPs members were identified in the safflower genome and divided into 9 subfamilies. Gene structure analysis showed that the possible evolutionary conservatism and functional similarity of the same family members. qRT-PCR at different florescence showed that the expression of CPs gene was the highest in the decline period, and CtCP1 gene changed significantly under abiotic stress. We cloned the qRT-PCR of CtCP1, at different florescence and stress, which showed that the expression of CtCP1 was the highest in the decline stage and low temperature. In order to study the function of CtCP1 gene, we obtained the overexpression CtCP1 line (OE) and the inhibition CtCP1 expression line (Anti) in Arabidopsis thaliana. The results of transgenic lines under low temperature stress showed that inhibition of CtCP1 expression enhanced the resistance of Carthamus tinctorius to low temperature, and overexpression of CtCP1 weakened the resistance of Carthamus tinctorius to low temperature.ConclusionWe have identified the cysteine protease genome of safflower and CtCP1 gene expression under abiotic stress


DNA Research ◽  
2011 ◽  
Vol 18 (5) ◽  
pp. 333-342 ◽  
Author(s):  
Y. Y. Yamamoto ◽  
Y. Yoshioka ◽  
M. Hyakumachi ◽  
J. Obokata

1993 ◽  
Vol 342 (1301) ◽  
pp. 185-185

In recent years, methods for studying genomic nucleic acids have developed greatly both in sophistication and in ease of use. This has led to rapid advances in knowledge about gene structure and function. Already the complete nucleotide sequences in the genomes of numerous viruses, and the functions of their genes, are known. Within a few years the structure of the complete genome of the higher plant, Arabidopsis thaliana, should be established. How best can this rapidly expanding body of information be used for the benefit of science and society?


Gene ◽  
2004 ◽  
Vol 336 (2) ◽  
pp. 219-229 ◽  
Author(s):  
Anuj M Bhatt ◽  
Qing Zhang ◽  
Stephen A Harris ◽  
Helen White-Cooper ◽  
Hugh Dickinson

1994 ◽  
Vol 5 (4) ◽  
pp. 551-558 ◽  
Author(s):  
Seok So Chang ◽  
Soon Ki Park ◽  
Byung Chul Kim ◽  
Bong Joong Kang ◽  
Dal Ung Kim ◽  
...  

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