Genome-Wide Identification Reveals the Potential Functions of the bZIP Gene Family in Common Bean (Phaseolus vulgaris) in Response to Salt Stress During the Sprouting Stage

2021 ◽  
Author(s):  
Qi Zhang ◽  
Wen-jing Zhang ◽  
Zhen-gong Yin ◽  
Wei-jia Li ◽  
Chun-Yang Xia ◽  
...  
Keyword(s):  
Salt Stress ◽  
Phaseolus Vulgaris ◽  
Gene Family ◽  
Common Bean ◽  
Potential Functions ◽  
Genome Wide

Genome-wide identification of CAMTA gene family members in Phaseolus vulgaris L. and their expression profiling during salt stress

2019 ◽  
Vol 46 (3) ◽  
pp. 2721-2732 ◽  
Author(s):  
İlker Büyük ◽  
Emre İlhan ◽  
Dilara Şener ◽  
Ata Umut Özsoy ◽  
Sümer Aras
Keyword(s):  
Salt Stress ◽  
Phaseolus Vulgaris ◽  
Gene Family ◽  
Expression Profiling ◽  
Family Members ◽  
Phaseolus Vulgaris L ◽  
Genome Wide

scholarly journals Genome-wide characterization of the NRAMP gene family in Phaseolus vulgaris provides insights into functional implications during common bean development

2018 ◽  
Vol 41 (4) ◽  
pp. 820-833 ◽  
Author(s):  
Juliane Karine Ishida ◽  
Danielle G.G. Caldas ◽  
Lucas Roberto Oliveira ◽  
Gabriela Campos Frederici ◽  
Lucas Margato Pereira Leite ◽  
...  
Keyword(s):  
Phaseolus Vulgaris ◽  
Gene Family ◽  
Common Bean ◽  
Genome Wide ◽  
Functional Implications

scholarly journals Genome-wide identification of the CCCH gene family in rose (Rosa chinensis Jacq.) reveals its potential functions

2021 ◽  
Vol 35 (1) ◽  
pp. 517-526
Author(s):  
Cai-hua Li ◽  
Qing-xi Fang ◽  
Wen-Jing Zhang ◽  
Yu-huan Li ◽  
Jin-zhu Zhang ◽  
...  
Keyword(s):  
Gene Family ◽  
Potential Functions ◽  
Rosa Chinensis ◽  
Genome Wide

scholarly journals Genome-Wide Analysis of the TCP Gene Family in Switchgrass (Panicum virgatum L.)

2019 ◽  
Vol 2019 ◽  
pp. 1-13 ◽  
Author(s):  
Yuzhu Huo ◽  
Wangdan Xiong ◽  
Kunlong Su ◽  
Yu Li ◽  
Yawen Yang ◽  
...  
Keyword(s):  
Salt Stress ◽  
Plant Growth ◽  
Gene Family ◽  
Stress Responses ◽  
Panicum Virgatum ◽  
Expression Profiles ◽  
Specific Expression ◽  
Genome Wide Analysis ◽  
Genome Wide ◽  
A Genome

The plant-specific transcription factor TCPs play multiple roles in plant growth, development, and stress responses. However, a genome-wide analysis of TCP proteins and their roles in salt stress has not been declared in switchgrass (Panicum virgatum L.). In this study, 42 PvTCP genes (PvTCPs) were identified from the switchgrass genome and 38 members can be anchored to its chromosomes unevenly. Nine PvTCPs were predicted to be microRNA319 (miR319) targets. Furthermore, PvTCPs can be divided into three clades according to the phylogeny and conserved domains. Members in the same clade have the similar gene structure and motif localization. Although all PvTCPs were expressed in tested tissues, their expression profiles were different under normal condition. The specific expression may indicate their different roles in plant growth and development. In addition, approximately 20 cis-acting elements were detected in the promoters of PvTCPs, and 40% were related to stress response. Moreover, the expression profiles of PvTCPs under salt stress were also analyzed and 29 PvTCPs were regulated after NaCl treatment. Taken together, the PvTCP gene family was analyzed at a genome-wide level and their possible functions in salt stress, which lay the basis for further functional analysis of PvTCPs in switchgrass.

Genome-wide association studies of Ca and Mn in the seeds of the common bean (Phaseolus vulgaris L.)

Genomics ◽  
2020 ◽  
Vol 112 (6) ◽  
pp. 4536-4546
Author(s):  
Semih Erdogmus ◽  
Duygu Ates ◽  
Seda Nemli ◽  
Bulent Yagmur ◽  
Tansel Kaygisiz Asciogul ◽  
...  
Keyword(s):  
Phaseolus Vulgaris ◽  
Common Bean ◽  
Association Studies ◽  
Genome Wide Association ◽  
Genome Wide Association Studies ◽  
Phaseolus Vulgaris L ◽  
Genome Wide ◽  
The Common

scholarly journals Genome-wide identification and co-expression network analysis of nuclear factor-Y in barley revealed potential functions in salt stress

2019 ◽  
Vol 25 (2) ◽  
pp. 485-495 ◽  
Author(s):  
Bahman Panahi ◽  
Seyyed Abolghasem Mohammadi ◽  
Kamil Ruzicka ◽  
Hossein Abbasi Holaso ◽  
Mohammad Zare Mehrjerdi
Keyword(s):  
Salt Stress ◽  
Network Analysis ◽  
Potential Functions ◽  
Nuclear Factor ◽  
Nuclear Factor Y ◽  
Genome Wide
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