scholarly journals Evolutionary origin and systematic position of Euphorbia normannii (Euphorbiaceae), an intersectional hybrid and local endemic of the Stavropol Heights (Northern Caucasus, Russia)

2021 ◽  
Vol 307 (2) ◽  
Author(s):  
Božo Frajman ◽  
Dmitry Geltman
Keyword(s):  
Phylogenetic Signal ◽  
Nuclear Data ◽  
Systematic Position ◽  
Hybrid Origin ◽  
Northern Caucasus ◽  
Phylogenetic Position ◽  
Annual Species ◽  
The Caucasus ◽  
Homoploid Hybrid ◽  
Local Endemic

AbstractThe Caucasus is one of the richest areas in the world in terms of animal and plant diversity, harbouring 6400 plant species. As a part of the Northern Caucasus, the Stavropol Heights are renowned for their local endemism, highlighted by six species of flowering plants endemic to this area. One of them is the annual species Euphorbia normannii, described in 1891, but with uncertain taxonomic position. We here used nuclear ribosomal internal transcribed spacer and plastid trnT–trnF sequences to infer the phylogenetic position of E. normannii. The nuclear data inferred its position within E. sect. Myrsiniteae, whereas the plastid data placed it within E. sect. Pithyusa, thus indicating a hybrid origin. Relative genome size (RGS) data indicate that E. normannii has the highest RGS compared to three other annual species belonging to both sections (E. aleppica, E. gaillardotii and E. falcata). Our data are inconclusive whether E. normannii is of allopolyploid or homoploid hybrid origin, or whether later hybridisation and plastid capture from E. sect. Pithyusa was responsible for the incongruent phylogenetic signal. Morphologically, E. normannii is distinct, as are all three before-mentioned annuals, which fall in predominately perennial sections. However, the species most similar to E. normannii is E. falcata from E. sect. Pithyusa and therefore we propose inclusion of E. normannii in this section.

scholarly journals Immature stages and phylogenetic importance of Astrapaeus, a rove beetle genus of puzzling systematic position (Coleoptera, Staphylinidae, Staphylinini)

2014 ◽  
Vol 83 (1) ◽  
pp. 41-p4 ◽  
Author(s):  
Ewa Pietrykowska-Tudruj ◽  
Bernard Staniec ◽  
Tadeusz Wojas ◽  
Alexey Solodovnikov
Keyword(s):  
Phylogenetic Signal ◽  
Systematic Position ◽  
Phylogenetic Position ◽  
Immature Stages ◽  
Larval Morphology ◽  
Laboratory Conditions ◽  
Rove Beetle ◽  
Evolutionary Context ◽  
Phylogenetic Hypotheses ◽  
First Time

For the first time eggs, larvae and pupae obtained by rearing are described for Astrapaeus, a monotypic West Palearctic rove beetle genus of a puzzling phylogenetic position within the megadiverse tribe Staphylinini. Morphology of the immature stages of Astrapaeus ulmi is compared to that of other members of the tribe and discussed in a phylogenetic context. Contrary to conventional systematics and in accordance with recently developed phylogenetic hypotheses based on morphology of adults, larval morphology supports the non-Quediina affiliation of Astrapaeus. Eggs and pupae provided fewer characters with putative phylogenetic signal. Under laboratory conditions, a peculiar preference for isopod prey was observed for A. ulmi. However, this could not be evaluated in an evolutionary context because of the lack of data on the diet of this and related taxa in nature.

scholarly journals Needle morphological evidence of the homoploid hybrid origin of P inus densata based on analysis of artificial hybrids and the putative parents, P inus tabuliformis and P inus yunnanensis

2014 ◽  
Vol 4 (10) ◽  
pp. 1890-1902 ◽  
Author(s):  
Fangqian Xing ◽  
Jian‐Feng Mao ◽  
Jingxiang Meng ◽  
Jianfeng Dai ◽  
Wei Zhao ◽  
...  
Keyword(s):  
Hybrid Origin ◽  
Morphological Evidence ◽  
Homoploid Hybrid

scholarly journals Phylogenetic Position of the New World Quail (Odontophoridae): Eight Nuclear Loci and Three Mitochondrial Regions Contradict Morphology and the Sibley-Ahlquist Tapestry

The Auk ◽  
2007 ◽  
Vol 124 (1) ◽  
pp. 71-84 ◽  
Author(s):  
W. Andrew Cox ◽  
Rebecca T. Kimball ◽  
Edward L. Braun
Keyword(s):  
New World ◽  
Sequence Data ◽  
Evolutionary Relationship ◽  
Strong Support ◽  
Nuclear Data ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Data Set ◽  
Mitochondrial Data ◽  
Nuclear Loci

Abstract The evolutionary relationship between the New World quail (Odontophoridae) and other groups of Galliformes has been an area of debate. In particular, the relationship between the New World quail and guineafowl (Numidinae) has been difficult to resolve. We analyzed >8 kb of DNA sequence data from 16 taxa that represent all major lineages of Galliformes to resolve the phylogenetic position of New World quail. A combined data set of eight nuclear loci and three mitochondrial regions analyzed with maximum parsimony, maximum likelihood, and Bayesian methods provide congruent and strong support for New World quail being basal members of a phasianid clade that excludes guineafowl. By contrast, the three mitochondrial regions exhibit modest incongruence with each other. This is reflected in the combined mitochondrial analyses that weakly support the Sibley-Ahlquist topology that placed the New World quail basal in relation to guineafowl and led to the placement of New World quail in its own family, sister to the Phasianidae. However, simulation-based topology tests using the mitochondrial data were unable to reject the topology suggested by our combined (mitochondrial and nuclear) data set. By contrast, similar tests using our most likely topology and our combined nuclear and mitochondrial data allow us to strongly reject the Sibley-Ahlquist topology and a topology based on morphological data that unites Old and New World quail. Posición Filogenética de las Codornices del Nuevo Mundo (Odontophoridae): Ocho Loci Nucleares y Tres Regiones Mitocondriales Contradicen la Morfología y la Filogenia de Sibley y Ahlquist

scholarly journals Importance of the postcranial skeleton in eusuchian phylogeny: Reassessing the systematics of allodaposuchid crocodylians

PLoS ONE ◽  
2021 ◽  
Vol 16 (6) ◽  
pp. e0251900
Author(s):  
Alejandro Blanco
Keyword(s):  
Current Knowledge ◽  
Phylogenetic Signal ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Postcranial Skeleton ◽  
Skull Morphology ◽  
Taxonomic Descriptions ◽  
The Family ◽  
Phylogenetic Hypotheses ◽  
Internal Relationships

Our current knowledge on the crocodyliform evolution is strongly biased towards the skull morphology, and the postcranial skeleton is usually neglected in many taxonomic descriptions. However, it is logical to expect that it can contribute with its own phylogenetic signal. In this paper, the changes in the tree topology caused by the addition of the postcranial information are analysed for the family Allodaposuchidae, the most representative eusuchians in the latest Cretaceous of Europe. At present, different phylogenetic hypotheses have been proposed for this group without reaching a consensus. The results of this paper evidence a shift in the phylogenetic position when the postcranium is included in the dataset, pointing to a relevant phylogenetic signal in the postcranial elements. Finally, the phylogenetic relationships of allodaposuchids within Eusuchia are reassessed; and the internal relationships within Allodaposuchidae are also reconsidered after an exhaustive revision of the morphological data. New and improved diagnoses for each species are here provided.

scholarly journals New data on Callovian (Middle Jurassic) belemnites and palynomorphs from the Northern Caucasus, southwest Russia

Geologos ◽  
2016 ◽  
Vol 22 (1) ◽  
pp. 49-59 ◽  
Author(s):  
Oksana S. Dzyuba ◽  
Anna A. Goryacheva ◽  
Dmitry A. Ruban ◽  
Victoria V. Gnezdilova ◽  
Pavel P. Zayats
Keyword(s):  
Middle Jurassic ◽  
Large Scale ◽  
Field Studies ◽  
Northern Caucasus ◽  
The Caucasus ◽  
Stratotype Section ◽  
Pollen And Spores ◽  
Degree Of Condensation ◽  
Northern Tethyan Margin ◽  
The Town

Abstract Palaeontological data on the Caucasus are highly important for large-scale stratigraphical and palaeobiogeographical assessment of the northern Tethyan margin, but this information is often scarce and not available in English. Field studies in the Northern Caucasus have now permitted to amass some new data. Two belemnite species are described from the stratotype section of the Kamennomostskaja Formation (Callovian, Middle Jurassic) near the town of Kamennomostskij in Adygeja (Northern Caucasus). These are Belemnopsis subhastata (von Zieten, 1831) and Rhopaloteuthis ominosa Gustomesov, 1968. The latter is a rare species, and the present find allows new insights into its taxonomy. A palyno-logical analysis of the belemnite-bearing sample was carried out, and a diverse assemblage of dinocysts, acritarchs and prasinophytes, plus pollen and spores recognised. The most abundant palynomorphs are Micrhystridium and Classopollis. Data on belemnites coupled with those on palynomorphs indicate the early Callovian age of the sample level. This interpretation differs slightly from previous conclusions based on ammonites and dinocysts. If this age is correct, the degree of condensation of Callovian deposits in the section studied was lesser than previously assumed.

scholarly journals Phylogenetic investigation of skin sloughing rates in frogs: relationships with skin characteristics and disease-driven declines

2019 ◽  
Vol 286 (1896) ◽  
pp. 20182378 ◽  
Author(s):  
Michel E. B. Ohmer ◽  
Rebecca L. Cramp ◽  
Craig R. White ◽  
Peter S. Harlow ◽  
Michael S. McFadden ◽  
...  
Keyword(s):  
Batrachochytrium Dendrobatidis ◽  
Phylogenetic Signal ◽  
Interspecific Variation ◽  
Phylogenetic Position ◽  
Turnover Rates ◽  
Amphibian Skin ◽  
Amphibian Species ◽  
Wide Range ◽  
Skin Morphology ◽  
And Function

Amphibian skin is highly variable in structure and function across anurans, and plays an important role in physiological homeostasis and immune defence. For example, skin sloughing has been shown to reduce pathogen loads on the skin, such as the lethal fungus Batrachochytrium dendrobatidis ( Bd ), but interspecific variation in sloughing frequency is largely unknown. Using phylogenetic linear mixed models, we assessed the relationship between skin turnover rate, skin morphology, ecological traits and overall evidence of Bd -driven declines. We examined skin sloughing rates in 21 frog species from three continents, as well as structural skin characteristics measured from preserved specimens. We found that sloughing rate varies significantly with phylogenetic group, but was not associated with evidence of Bd -driven declines, or other skin characteristics examined. This is the first comparison of sloughing rate across a wide range of amphibian species, and creates the first database of amphibian sloughing behaviour. Given the strong phylogenetic signal observed in sloughing rate, approximate sloughing rates of related species may be predicted based on phylogenetic position. While not related to available evidence of declines, understanding variation in sloughing rate may help explain differences in the severity of infection in genera with relatively slow skin turnover rates (e.g. Atelopus ).

scholarly journals New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life

2019 ◽  
Vol 36 (4) ◽  
pp. 757-765 ◽  
Author(s):  
Jürgen F H Strassert ◽  
Mahwash Jamy ◽  
Alexander P Mylnikov ◽  
Denis V Tikhonenkov ◽  
Fabien Burki
Keyword(s):  
Phylogenetic Signal ◽  
Evolutionary Origin ◽  
Phylogenetic Position ◽  
Aquatic Environments ◽  
Phylogenomic Analysis ◽  
Data Sets ◽  
Transcriptome Data ◽  
Phylogenetic Reconstructions ◽  
Phylogenomic Analyses ◽  
Alignment Length

AbstractThe resolution of the broad-scale tree of eukaryotes is constantly improving, but the evolutionary origin of several major groups remains unknown. Resolving the phylogenetic position of these “orphan” groups is important, especially those that originated early in evolution, because they represent missing evolutionary links between established groups. Telonemia is one such orphan taxon for which little is known. The group is composed of molecularly diverse biflagellated protists, often prevalent although not abundant in aquatic environments. Telonemia has been hypothesized to represent a deeply diverging eukaryotic phylum but no consensus exists as to where it is placed in the tree. Here, we established cultures and report the phylogenomic analyses of three new transcriptome data sets for divergent telonemid lineages. All our phylogenetic reconstructions, based on 248 genes and using site-heterogeneous mixture models, robustly resolve the evolutionary origin of Telonemia as sister to the Sar supergroup. This grouping remains well supported when as few as 60% of the genes are randomly subsampled, thus is not sensitive to the sets of genes used but requires a minimal alignment length to recover enough phylogenetic signal. Telonemia occupies a crucial position in the tree to examine the origin of Sar, one of the most lineage-rich eukaryote supergroups. We propose the moniker “TSAR” to accommodate this new mega-assemblage in the phylogeny of eukaryotes.

Cabamofa orientalis sp. nov. from Thailand, congeneric with C. mira Jaschhof from Costa Rica (Diptera: Bibionomorpha: Sciaroidea incertae sedis)

Zootaxa ◽  
2019 ◽  
Vol 4576 (2) ◽  
pp. 392
Author(s):  
MATHIAS JASCHHOF ◽  
JAN ŠEVČÍK
Keyword(s):  
Costa Rica ◽  
Systematic Position ◽  
Phylogenetic Position ◽  
Morphological Evidence ◽  
Molecular Evidence ◽  
Present Contribution ◽  
Single Male ◽  
Lowland Rain Forest ◽  
Incertae Sedis ◽  
Entomological Research

The genus Cabamofa, previously containing only C. mira from Costa Rica (Jaschhof 2005), is shown here to have a second species in Thailand, which is described and named C. orientalis sp. nov. The new species is known from a single male collected by the TIGER Project (Thailand Inventory Group for Entomological Research), a mass-sampling program to inventory insect diversity in Southeast Asia (Plant et al. 2011; http://sharkeylab.org/tiger, accessed 14 December 2018). As the circumstances of finding indicate, C. orientalis is a decidedly rare species, an attribute applying to perhaps one third of all tropical arthropods (Lim et al. 2012) and most Sciaroidea incertae sedis (Jaschhof 2017), including the Costa Rican C. mira. The latter species was originally described from two females, which were Malaise trapped in 2003 in lowland rain forest (Jaschhof 2005), while a conspecific male, a museum specimen collected in 1922 in an unknown habitat, was detected and described subsequently (Amorim & Rindal 2007). Cabamofa is one of nearly 20 sciaroid genera whose family affiliation has not yet been resolved (Jaschhof 2017), but there is morphological evidence suggesting its close affinity to other Sciaroidea incertae sedis, such as Rogambara Jaschhof, 2005, Ohakunea Tonnoir & Edwards, 1927, and Colonomyia Colless, 1963. These four genera together form the Ohakunea group of Jaschhof (2005), or the Ohakuneinae (as a subfamily of the broadly conceived family Rangomaramidae) of Amorim & Rindal (2007). Recent molecular work (Ševčík et al. 2016, Kaspřák et al. 2019) suggests a more distant phylogenetic position of Ohakunea to other Sciaroidea incertae sedis. The obvious conflict here between morphological and molecular evidence is stimulating fresh interest in the “incertae sedis issue”, as proven by the present contribution. The morphology of C. orientalis provides no new clues as to the systematic position of Cabamofa, or the Ohakunea group, but reveals characters that were previously not known to occur in Cabamofa. The delimitation of this genus is briefly reviewed below. Our finding of C. orientalis extends the geographic distribution of Cabamofa from the New World to the Old World (Oriental) tropics, which consorts with the disjunct (Neotropical-Australasian) areas found in both Colonomyia and Ohakunea. Morphological terminology used here is in accordance with that by Cumming & Wood (2017). 

Evolutionary history of Purple cone spruce (Picea purpurea) in the Qinghai-Tibet Plateau: homoploid hybrid origin and Pleistocene expansion

2013 ◽  
Vol 23 (2) ◽  
pp. 343-359 ◽  
Author(s):  
Yongshuai Sun ◽  
Richard J. Abbott ◽  
Lili Li ◽  
Long Li ◽  
Jiabin Zou ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Hybrid Origin ◽  
Tibet Plateau ◽  
History Of ◽  
Homoploid Hybrid ◽  
Qinghai Tibet Plateau

scholarly journals Morphology, Morphogenesis, and Molecular Phylogeny of a New Freshwater Ciliate, Quadristicha subtropica n. sp. (Ciliophora, Hypotrichia)

2021 ◽  
Vol 12 ◽  
Author(s):  
Chen Shao ◽  
Qi Gao ◽  
Alan Warren ◽  
Jingyi Wang
Keyword(s):  
Sequence Data ◽  
Southern China ◽  
Phylogenetic Analyses ◽  
Small Subunit ◽  
Systematic Position ◽  
Phylogenetic Position ◽  
Dna Sequence Data ◽  
Freshwater Pond ◽  
Small Subunit Ribosomal Dna

The morphology and the regulation of cortical pattern associated with the cell size, division, and phylogenetic position of a new hypotrichous ciliate, Quadristicha subtropica n. sp. collected from a freshwater pond in southern China, were investigated. Quadristicha subtropica n. sp. is characterized as follows: size in vivo 60–115 μm × 25–45 μm; 19–21 adoral membranelles; buccal cirrus near anterior end of endoral and paroral; cirrus IV/3 at about level of buccal vertex; right marginal row begins ahead of buccal vertex; 11–16 right and 12–19 left marginal cirri; and dorsal cilia about 5 μm long. The basic morphogenetic process in Q. subtropica n. sp. is consistent with that of the type species, Quadristicha setigera. Phylogenetic analyses based on small subunit ribosomal DNA sequence data reveal that the systematic position of Q. subtropica n. sp. is rather unstable with low support values across the tree and the genus Quadristicha is not monophyletic.

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