On-chip parallel detection of foodborne pathogens using loop-mediated isothermal amplification

2013 ◽  
Vol 15 (5) ◽  
pp. 821-830 ◽  
Author(s):  
Carlos Duarte ◽  
Eric Salm ◽  
Brian Dorvel ◽  
Bobby Reddy ◽  
Rashid Bashir
Lab on a Chip ◽  
2020 ◽  
Vol 20 (13) ◽  
pp. 2296-2305 ◽  
Author(s):  
Siyuan Wang ◽  
Ning Liu ◽  
Lingyan Zheng ◽  
Gaozhe Cai ◽  
Jianhan Lin

Rapid screening of foodborne pathogens is key to prevent food poisoning.


2020 ◽  
Vol 12 (46) ◽  
pp. 5551-5561
Author(s):  
Tianzeng Huang ◽  
Linzhi Li ◽  
Xing Liu ◽  
Qi Chen ◽  
Xueen Fang ◽  
...  

LAMP is a relatively novel gene amplification method under isothermal conditions with rapidity, and high specificity. It is widely applied in the field of food safety, such as in the detection of foodborne pathogens, GM, OP pesticides and so on


Micromachines ◽  
2019 ◽  
Vol 10 (11) ◽  
pp. 777 ◽  
Author(s):  
Xue Lin ◽  
Xiangyu Jin ◽  
Bin Xu ◽  
Ruliang Wang ◽  
Rongxin Fu ◽  
...  

Considering the lack of official vaccines and medicines for Ebola virus infection, reliable diagnostic methods are necessary for the control of the outbreak and the spread of the disease. We developed a microfluidic-chip-based portable system for fast and parallel detection of four Ebola virus species. The system is based on reverse transcription loop-mediated isothermal amplification (RT-LAMP) and consists of four specific LAMP primers, a disc microfluidic chip, and a portable real-time fluorescence detector. It could specifically and parallelly distinguish four species of the Ebola virus after only one sampling, including the Zaire Ebola virus, the Sudan Ebola virus, the Bundibugyo Ebola virus, and the Tai Forest Ebola virus, without cross-contamination. The limit of detection was as small as 10 copies per reaction, while the total consumption of sample and reagent was 0.94 μL per reaction. The final results could be obtained in 50 min after one addition of sample and reagent mixture. This approach provides simplicity, high sensitivity, and multi-target parallel detection at a low cost, which could enable convenient and effective on-site detections of the Ebola virus in the outdoors, remote areas, and modern hospitals.


Author(s):  
Kelly J. Domesle ◽  
Shenia R. Young ◽  
Beilei Ge

Raw pet food, comprised of raw meat and vegetables, has increased in popularity in recent years. Multiple surveys and frequent recalls indicate that this commodity has a high risk of contamination with Salmonella and other foodborne pathogens. Improved screening methods are needed to meet the growing demand for testing. This matrix verification study aimed to apply a Salmonella loop-mediated isothermal amplification (LAMP) method, recently completed multi-laboratory validation in dry dog food, in several raw pet food matrices, following the U.S. Food and Drug Administration’s method validation guidelines. Five types of raw pet food, consisting of freeze-dried beef and chicken treats, and frozen beef, pork, and turkey complete foods, were evaluated. For each matrix, two sets of ten 25-g test portions (seven inoculated with ≤ 30 cells of Salmonella Typhimurium and three uninoculated controls) were examined. One set was preenriched in buffered peptone water and the other one in lactose broth, which was followed by LAMP screening using two isothermal master mixes (ISO-001 and ISO-004). All results were confirmed by culture as specified in the Bacteriological Analytical Manual (BAM). The LAMP method accurately detected Salmonella in all inoculated test portions of the five raw pet food samples, regardless of the preenrichment broth used. Positive results could be obtained within 4 min of the LAMP run using the LAMP ISO-004 master mix. All uninoculated controls tested negative by LAMP or BAM. Additionally, one turkey-based complete pet food sample was found to be already contaminated with three Salmonella serovars harboring multiple antimicrobial resistance genes. The Salmonella LAMP method offers a rapid, reliable, and robust tool for routine screening of Salmonella in raw pet food, which will help better ensure product safety and protect public health.


RSC Advances ◽  
2016 ◽  
Vol 6 (106) ◽  
pp. 103872-103887 ◽  
Author(s):  
Carlos Duarte-Guevara ◽  
Vikhram V. Swaminathan ◽  
Bobby Reddy ◽  
Jui-Cheng Huang ◽  
Yi-Shao Liu ◽  
...  

Over one million DG-BioFETs are used for the parallel electrical detection of LAMP reactions identifying the presence of bacterial pathogens, demonstrating a miniaturized DNA-based screening platform.


2018 ◽  
Vol 90 (22) ◽  
pp. 13173-13177 ◽  
Author(s):  
Hao Yuan ◽  
Youchuang Chao ◽  
ShanShan Li ◽  
Matthew Y. H. Tang ◽  
Yue Huang ◽  
...  

10.5219/1165 ◽  
2019 ◽  
Vol 13 (1) ◽  
pp. 800-805
Author(s):  
Yuliya Yushina ◽  
Anzhelika Makhova ◽  
Elena Zayko ◽  
Dagmara Bataeva

There is a continued need to develop improved rapid methods for detection of foodborne pathogens. Rapid and sensitive methods for enumeration of Listeria monocytogenes are important for microbiological food safety testing purpose. The aim of this project was to evaluate a commercial loop-mediated isothermal amplification (LAMP) based system with bioluminescence, named as 3M™ Molecular Detection Assay (MDA), was validated for the detection of L. monocytogenes in food products with a standard GOST 32031-2012 method as reference. The results of this study revealed that a commercial LAMP-based method performed equally effective compared with method, showing from 94% to 100% specificity and sensitivity, respectively. The LAMP-based method was shown to be rapid and reliable detection technique for L. monocytogenes present at low numbers (10 CFU.g-1) on raw meat and meat products and can be applicable in meat industry. Thus, compared with the microbiological method based GOST 32031-2012, the LAMP assay is a relatively rapid and highly sensitive method for detecting L. monocytogenes and will facilitate the surveillance for contamination of L. monocytogenes in food. The 3M MDS result and culture-based detection (GOST 32031-2012) did not differ significantly (p >0.05) regarding the number of positive samples.


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