scholarly journals How wide is the window opened by high-resolution relaxometry on the internal dynamics of proteins in solution?

2021 ◽  
Vol 75 (2-3) ◽  
pp. 119-131
Author(s):  
Albert A. Smith ◽  
Nicolas Bolik-Coulon ◽  
Matthias Ernst ◽  
Beat H. Meier ◽  
Fabien Ferrage

AbstractThe dynamics of molecules in solution is usually quantified by the determination of timescale-specific amplitudes of motions. High-resolution nuclear magnetic resonance (NMR) relaxometry experiments—where the sample is transferred to low fields for longitudinal (T1) relaxation, and back to high field for detection with residue-specific resolution—seeks to increase the ability to distinguish the contributions from motion on timescales slower than a few nanoseconds. However, tumbling of a molecule in solution masks some of these motions. Therefore, we investigate to what extent relaxometry improves timescale resolution, using the “detector” analysis of dynamics. Here, we demonstrate improvements in the characterization of internal dynamics of methyl-bearing side chains by carbon-13 relaxometry in the small protein ubiquitin. We show that relaxometry data leads to better information about nanosecond motions as compared to high-field relaxation data only. Our calculations show that gains from relaxometry are greater with increasing correlation time of rotational diffusion.

1967 ◽  
Vol 40 (2) ◽  
pp. 385-399 ◽  
Author(s):  
Raymond C. Ferguson

Abstract High resolution NMR spectroscopy is proving to be a useful experimental technique for determining the microstructures of high polymers. Its major utility, aside from identifying structural features often not detectable by other methods, lies in quantitative applications. Some examples are the determination of monomer ratios in copolymers, polymer tacticity, sequence isomerism of monomer units, and other types of structural isomerism. The applicability of the method is being enhanced by continuing development of high-field spectrometers, special accessories, and new experimental techniques, and by application of computers to the analysis of spectral data.


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