Wild genetic diversity preservation in a small-sized first generation breeding population of Allanblackia floribunda (Clusiaceae)

2009 ◽  
Vol 6 (1) ◽  
pp. 127-136 ◽  
Author(s):  
Alain R. Atangana ◽  
Jean Beaulieu ◽  
Damase P. Khasa
Keyword(s):  
Genetic Diversity ◽  
First Generation ◽  
Breeding Population ◽  
Diversity Preservation

scholarly journals Microsatellite-Based Genetic Structure and Hybrid Detection in Alpacas Bred in Poland

Animals ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 2193
Author(s):  
Angelika Podbielska ◽  
Katarzyna Piórkowska ◽  
Tomasz Szmatoła
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Markers ◽  
First Generation ◽  
Expected Heterozygosity ◽  
Hybrid Detection ◽  
Average Coefficient ◽  
Mixed Origin ◽  
Generation Hybrid

This study aimed to characterize the population structure and genetic diversity of alpacas maintained in Poland using 17 microsatellite markers recommended by the International Society for Animal Genetics. The classification of llamas, alpacas, and hybrids of both based on phenotype is often difficult due to long-term admixture. Our results showed that microsatellite markers can distinguish alpacas from llamas and provide information about the level of admixture of one species in another. Alpacas admixed with llamas constituted 8.8% of the tested individuals, with the first-generation hybrid displaying only 7.4% of llama admixture. The results showed that Poland hosts a high alpaca genetic diversity as a consequence of their mixed origin. More than 200 different alleles were identified and the average observed heterozygosity and expected heterozygosity values were 0.745 and 0.768, respectively, the average coefficient of inbreeding was 0.034, and the average polymorphism information content value was 0.741. The probability of exclusion for one parent was estimated at 0.99995 and for two parents at 0.99999.

scholarly journals AUTOCHTHONOUS BREEDS OF DOMESTIC ANIMALS AND CONSERVATION MEASURES

AGROFOR ◽  
2021 ◽  
Vol 6 (1) ◽  
Author(s):  
Zoran MALETIC
Keyword(s):  
Genetic Diversity ◽  
Biological Diversity ◽  
Domestic Animals ◽  
Conservation Strategy ◽  
Ex Situ ◽  
Animal Genetic Resources ◽  
Diversity Preservation ◽  
The Republic ◽  
International Conventions

Recently, highly productive breeds of various species of domestic animals have been used in livestock production, which has resulted in the destruction of indigenous breeds of domestic animals around the world, even in our area. This is the first reason why indigenous races and strains have been endangered. Another reason is that domestic, indigenous breeds were crossed with specialized breeds, which were imported, and in that way their genetic diversity was negatively affected. Resistance is lost, adaptation to the conditions in which they were created, the ability to survive in nature. Indigenous breeds of different species of domestic animals, which are recognized in the Republic of Srpska (BiH) are gatačko cattle and buša (cattle), Vlašić pramenka, Podveleška pramenka, Kupres pramenka (sheep), domestic Balkan horned goat (goats), Bosnian mountain horse (horses), mangulica (pigs) and pogrmuša hen or živičarka hen (poultry). By acceding to international conventions, BiH /Republic of Srpska has committed itself to establishing a system of measures that will enable the conservation of biological diversity and the protection of indigenous and endangered breeds of domestic animals. The choice of a strategy for the conservation of diversity, the establishment of an adequate conservation scheme, and the implementation of a conservation strategy are some of the key elements of any process for the conservation of genetic diversity. Preservation of autochthonous and protected breeds of domestic animals is possible through preservation in the original environment (in situ) and preservation outside the original environment (ex situ). There is a possibility of combining these models of conservation of animal genetic resources.

scholarly journals Loss of Genetic Diversity with Captive Breeding and Re-Introduction: A Case Study on Pateke/Brown Teal (Anas chlorotis)

2021 ◽  
Author(s):  
◽  
Gemma Bowker-Wright
Keyword(s):  
Genetic Diversity ◽  
Mitochondrial Dna ◽  
Captive Breeding ◽  
Barrier Island ◽  
Breeding Population ◽  
Island Population ◽  
Wildlife Sanctuary ◽  
Management Options ◽  
Introduced Populations ◽  
Loss Of Genetic Diversity

<p>Pateke/brown teal (Anas chlorotis) have experienced a severe population crash leaving only two remnant wild populations (at Great Barrier Island and Mimiwhangata, Northland). Recovery attempts over the last 35 years have focused on an intensive captive breeding programme which breeds pateke, sourced almost exclusively from Great Barrier Island, for release to establish re-introduced populations in areas occupied in the past. While this important conservation measure may have increased pateke numbers, it was unclear how much of their genetic diversity was being retained. The goal of this study was to determine current levels of genetic variation in the remnant, captive and re-introduced pateke populations using two types of molecular marker, mitochondrial DNA (mtDNA) and microsatellite DNA. Feathers were collected from pateke at Great Barrier Island, Mimiwhangata, the captive breeding population and four re-introduced populations (at Moehau, Karori Wildlife Sanctuary, Tiritiri Matangi Island and Mana Island). DNA was extracted from the base of the feathers, the mitochondrial DNA control region was sequenced, and DNA microsatellite markers were used to genotype individuals. The Great Barrier Island population was found to have only two haplotypes, one in very high abundance which may indicate that historically this population was very small. The captive breeding population and all four re-introduced populations were found to contain only the abundant Great Barrier Island haplotype as the vast majority of captive founders were sourced from this location. In contrast, the Mimiwhangata population contained genetic diversity and 11 haplotypes were found, including the Great Barrier Island haplotype which may have been introduced by captive-bred releases which occurred until the early 1990s. From the microsatellite results, a loss of genetic diversity (measured as average alleles per locus, heterozygosity and allelic richness) was found from Great Barrier Island to captivity and from captivity to re-introduction. Overall genetic diversity within the re-introduced populations (particularly the smaller re-introduced populations at Karori Wildlife Sanctuary, Tiritiri Matangi Island and Mana Island) was much reduced compared with the remnant populations, most probably as a result of small release numbers and small population size. Such loss of genetic diversity could render the re-introduced populations more susceptible to inbreeding depression in the future. Suggested future genetic management options are included which aim for a broader representation of genetic diversity in the pateke captive breeding and release programme.</p>

Sperm motility and offspring pre- and post-hatching survival in hybridization crosses among a landlocked and two anadromous Atlantic salmon populations: implications for conservation

2020 ◽  
Author(s):  
Aslak Tiuna Eronen ◽  
Jukka Kekäläinen ◽  
Jorma Piironen ◽  
Pekka Hyvärinen ◽  
Hannu Huuskonen ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Sperm Motility ◽  
First Generation ◽  
Hybrid Vigor ◽  
Outbreeding Depression ◽  
Genetic Rescue ◽  
Low Genetic Diversity ◽  
Salmon Eggs ◽  
Salmon Population ◽  
Lake Saimaa

The landlocked salmon (Salmo salar m. sebago) endemic to Lake Saimaa, Finland, is critically endangered and severely threatened by low genetic diversity and inbreeding. To explore the possibility of increasing the genetic diversity of threatened salmon populations by controlled hybridization (genetic rescue), we studied sperm motility and offspring pre- and post-hatching survival in hybridization crosses of landlocked salmon with two geographically close anadromous salmon populations (Rivers Neva and Tornio) relative to the pure-bred populations. While some degree of gametic incompatibility between landlocked and Tornio salmon cannot be ruled out, there were no indications of outbreeding depression in survival traits in these first-generation hybridizations. Instead, pre-hatching survival of landlocked salmon eggs fertilized with Neva salmon sperm and post-hatching survival of anadromous salmon eggs fertilized with landlocked salmon sperm were higher than in pure-bred landlocked salmon. These differences might imply genetic rescue effects (hybrid vigor), although there were also strong maternal effects involved. Our results on early viability point to the possibility of applying genetic rescue to the landlocked salmon population by hybridization with an anadromous population.

scholarly journals Loss of Genetic Diversity with Captive Breeding and Re-Introduction: A Case Study on Pateke/Brown Teal (Anas chlorotis)

2021 ◽  
Author(s):  
◽  
Gemma Bowker-Wright
Keyword(s):  
Genetic Diversity ◽  
Mitochondrial Dna ◽  
Captive Breeding ◽  
Barrier Island ◽  
Breeding Population ◽  
Island Population ◽  
Wildlife Sanctuary ◽  
Management Options ◽  
Introduced Populations ◽  
Loss Of Genetic Diversity

<p>Pateke/brown teal (Anas chlorotis) have experienced a severe population crash leaving only two remnant wild populations (at Great Barrier Island and Mimiwhangata, Northland). Recovery attempts over the last 35 years have focused on an intensive captive breeding programme which breeds pateke, sourced almost exclusively from Great Barrier Island, for release to establish re-introduced populations in areas occupied in the past. While this important conservation measure may have increased pateke numbers, it was unclear how much of their genetic diversity was being retained. The goal of this study was to determine current levels of genetic variation in the remnant, captive and re-introduced pateke populations using two types of molecular marker, mitochondrial DNA (mtDNA) and microsatellite DNA. Feathers were collected from pateke at Great Barrier Island, Mimiwhangata, the captive breeding population and four re-introduced populations (at Moehau, Karori Wildlife Sanctuary, Tiritiri Matangi Island and Mana Island). DNA was extracted from the base of the feathers, the mitochondrial DNA control region was sequenced, and DNA microsatellite markers were used to genotype individuals. The Great Barrier Island population was found to have only two haplotypes, one in very high abundance which may indicate that historically this population was very small. The captive breeding population and all four re-introduced populations were found to contain only the abundant Great Barrier Island haplotype as the vast majority of captive founders were sourced from this location. In contrast, the Mimiwhangata population contained genetic diversity and 11 haplotypes were found, including the Great Barrier Island haplotype which may have been introduced by captive-bred releases which occurred until the early 1990s. From the microsatellite results, a loss of genetic diversity (measured as average alleles per locus, heterozygosity and allelic richness) was found from Great Barrier Island to captivity and from captivity to re-introduction. Overall genetic diversity within the re-introduced populations (particularly the smaller re-introduced populations at Karori Wildlife Sanctuary, Tiritiri Matangi Island and Mana Island) was much reduced compared with the remnant populations, most probably as a result of small release numbers and small population size. Such loss of genetic diversity could render the re-introduced populations more susceptible to inbreeding depression in the future. Suggested future genetic management options are included which aim for a broader representation of genetic diversity in the pateke captive breeding and release programme.</p>

scholarly journals Genetic variation among Iranian alfalfa (Medicago sativa L.) populations based on RAPD markers

2011 ◽  
Vol 18 (2) ◽  
pp. 93-104 ◽  
Author(s):  
Fatemeh Mohammadzadeh ◽  
Hassan Monirifar ◽  
Jalal Saba ◽  
Mostafa Valizadeh ◽  
Ahmad Razban Haghighi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Cluster Analysis ◽  
Genetic Variation ◽  
Breeding Population ◽  
Genetic Distances ◽  
Analysis Of Molecular Variance ◽  
Molecular Variance ◽  
Geographical Patterns ◽  
Plant Taxon ◽  
High Level

Genetic diversity among and within 10 populations of Iranian alfalfa, from different areas of Azarbaijan, Iran was analyzed by screening DNA from seeds of individual plants and bulk samples. In individual study, 10 randomly amplified polymorphic DNA (RAPD) primers produced 156 polymorphic bands and a high level of genetic diversity was observed within populations. The averages of total and within population genetic diversity were 0.2349 and 0.1892, respectively. Results of analysis of molecular variance (AMOVA) showed the great genetic variation existed within populations (81.37%). These Results were in agreement with allogamous and polyploid nature of alfalfa. Cluster analysis was performed based on Nei’s genetic distances resulting in grouping into 3 clusters which could separate breeding population from other populations. Results of cluster analysis were in consistent with morphological and geographical patterns of populations. The results of bulk method were different from individual analysis. Our results showed that RAPD analysis is a suitable method to study genetic diversity and relationships among alfalfa populations.Keywords: Alfalfa; RAPD; Genetic diversity; Analysis of Molecular Variance; Cluster analysis.DOI: http://dx.doi.org/10.3329/bjpt.v18i2.9296Bangladesh J. Plant Taxon. 18: (2): 93-104, 2011 (December)

scholarly journals Use of genetic markers to build a new generation of Eucalyptus pilularis breeding population

2015 ◽  
Vol 64 (1-6) ◽  
pp. 170-181 ◽  
Author(s):  
Paulo H. M. Da Silva ◽  
M. Shepherd ◽  
D. Grattapaglia ◽  
A. M. Sebbenn
Keyword(s):  
Genetic Diversity ◽  
Recurrent Selection ◽  
Breeding Population ◽  
Generation Times ◽  
Plantation Species ◽  
Lower Fertility ◽  
Eucalyptus Pilularis ◽  
Early Performance ◽  
New Generation ◽  
Modern Breeding

Abstract Tree improvement generally proceeds by incremental gains obtained from recurrent selection in large diverse populations but is slow due to long generation times and delay till trees reach assessment age. This places a premium upon extracting data from historic introductions used to found landraces when reinstating modern breeding programs. The value of such resources, however, may be degraded due to a lack of records on germplasm origins, pedigrees and early performance, but DNA technology may help recoup some of this value. Eucalyptus pilularis (subgenus Eucalyptus) is regarded as a premier hardwood plantation species for saw log and poles in Australia, but has not been used extensively despite early introductions and testing in many countries overseas. Here we use DNA fingerprinting to assess genetic diversity and inbreeding in historic introductions of E. pilularis to evaluate this resource in advance of a reinvigorated breeding effort for this species in Brazil. As expected, based on the available documentation for the introductions, genetic diversity relative to Australian reference populations does not appear to be compromised, and there was unlikely to be excessive inbreeding. Also, favorable, was the likelihood that further selections should not unduly increase the relationship in the next generation. Interestingly, we note the importance of testing widely adapted sources of germplasm when making introductions, as provenances which performed poorly in tests on productive sites in Australia, may have value when matched with lower fertility sites overseas.

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