Genetic engineering/ metabolic engineering approaches for improved cellulase production

Author(s):  
Arvind Verma ◽  
Anju M. Nair ◽  
Syed Shams Yazdani
2020 ◽  
Vol 21 (23) ◽  
pp. 9185
Author(s):  
Amritpal Singh ◽  
Kenneth T. Walker ◽  
Rodrigo Ledesma-Amaro ◽  
Tom Ellis

Synthetic biology is an advanced form of genetic manipulation that applies the principles of modularity and engineering design to reprogram cells by changing their DNA. Over the last decade, synthetic biology has begun to be applied to bacteria that naturally produce biomaterials, in order to boost material production, change material properties and to add new functionalities to the resulting material. Recent work has used synthetic biology to engineer several Komagataeibacter strains; bacteria that naturally secrete large amounts of the versatile and promising material bacterial cellulose (BC). In this review, we summarize how genetic engineering, metabolic engineering and now synthetic biology have been used in Komagataeibacter strains to alter BC, improve its production and begin to add new functionalities into this easy-to-grow material. As well as describing the milestone advances, we also look forward to what will come next from engineering bacterial cellulose by synthetic biology.


Author(s):  
Jerolen Naidoo ◽  
Ezio Fok ◽  
Lichelle Grobler ◽  
Reitumetse Molaoa ◽  
Zandile Nxumalo ◽  
...  

2016 ◽  
Vol 14 (4) ◽  
pp. 283-302 ◽  
Author(s):  
R. N. Kulkarni ◽  
K. Baskaran ◽  
Tripta Jhang

AbstractPeriwinkle [Catharanthus roseus(L) G. Don] has become one of the very extensively investigated medicinal plants after the discovery of two powerful anti-cancer alkaloids, vinblastine and vincristine, in its leaves more than 50 years ago. These alkaloidal drugs are still in clinical use. Also, periwinkle is still the only source of these alkaloids and their precursors, catharanthine and vindoline. Low concentrations of these alkaloids in the plant and, therefore, high costs of their extraction have led to tremendous efforts towards understanding their biosynthesis and exploration of alternate ways of their production such as, chemical synthesis, cell, tissue and hairy root cultures, and metabolic engineering of heterologous organisms. Literature on this plant is quite voluminous, with an average of about 80 publications per year during last three decades (1985–2015). Nearly 60% of these publications are on physiology, biochemistry, cell and tissue culture, phytochemistry, metabolic and genetic engineering aspects. In spite of these efforts, an economically viable alternative to field-grown periwinkle plants as a source of these alkaloids has not yet been found. Biosynthesis ofC. roseusalkaloids is a complex process involving many genes, enzymes, regulators, inter- and intra-cellular transporters, cell types, organelles and tissues and its current understanding is still considered to be incomplete to produceC. roseusalkaloids through metabolic engineering/synthetic biology. Till such time, breeding periwinkle varieties with higher concentrations of anti-cancer alkaloids for cultivation can be an alternate approach to meet the demand for these alkaloids and reduce their costs. While literature on cell and tissue culture, phytochemistry, metabolic and genetic engineering aspects of periwinkle has been reviewed periodically, crop production and plant breeding aspects have received little attention. In this paper, an attempt has been made to bring together published information on genetics and breeding of periwinkle as a medicinal plant. Some probable constraints which may have hindered taking up periwinkle breeding are identified. Initially, quite a few attempts have been made at genetic improvement of periwinkle through induced polyploidy, and subsequently through induced mutagenesis. Mutations, both natural and induced, provide a valuable resource for use in breeding and in functional and reverse genomics research. It is only during last 6–7 years, genetic diversity has been assessed using molecular markers and very recently molecular markers have been identified for marker-assisted selection for alkaloid yield.


2019 ◽  
Author(s):  
Luísa Czamanski Nora ◽  
Maren Wehrs ◽  
Joonhoon Kim ◽  
Jan-Fang Cheng ◽  
Angela Tarver ◽  
...  

ABSTRACTBackgroundRhodosporidium toruloidesis a promising host for the production of bioproducts from lignocellulosic biomass. A key prerequisite for efficient pathway engineering is the availability of robust genetic tools and resources. However, there is a lack of characterized promoters to drive expression of heterologous genes for strain engineering inR. toruloides.ResultsOur data describes a set of nativeR. toruloidespromoters, characterized over time in four different media commonly used for cultivation of this yeast. The promoter sequences were selected using transcriptional analysis and several of them were found to drive expression bidirectionally. We measured promoter expression strength by flow cytometry using a dual fluorescent reporter system. From these analyses, we found a total of 20 constitutive promoters (12 monodirectional and 8 bidirectional) of potential value for genetic engineering ofR. toruloides.ConclusionsWe present a list of robust and constitutive, native promoters to facilitate genetic engineering ofR. toruloides.This set of thoroughly characterized promoters significantly expands the range of engineering tools available for this yeast and can be applied in future metabolic engineering studies.


2020 ◽  
Vol 7 (1) ◽  
pp. 1-5
Author(s):  
Supriya Ratnaparkhe ◽  
Milind B. Ratnaparkhe

Bio-fuels are ecologically sustainable alternates of fossil fuel and have attracted interest of research community in the last few decades. Microorganisms such as bacteria, fungi and microalgae have important roles to play at various steps of bio-fuel production. And therefore several efforts such as genetic engineering have been made to improve the performance of these microbes to achieve the desired results. Metabolic engineering of organisms has benefitted immensely from the novel tools and technologies that have recently been developed. Microorganisms have the advantage of smaller and less complex genome and hence are best suitable for genetic manipulations. In this perspective, we briefly review a few interesting studies which represent some recent advances in the field of metabolic engineering of microbes.


2002 ◽  
Vol 79 (5) ◽  
pp. 568-579 ◽  
Author(s):  
James E. Bailey ◽  
Adriana Sburlati ◽  
Vassily Hatzimanikatis ◽  
Kelvin Lee ◽  
Wolfgang A. Renner ◽  
...  

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