From genes to ecosystems: using molecular information from diatoms to understand ecological processes

2022 ◽  
pp. 487-529
Author(s):  
John A. Berges ◽  
Erica B. Young ◽  
Kimberlee Thamatrakoln ◽  
Alison R. Taylor
Author(s):  
Andrew Clarke ◽  
Nadine M Johnston ◽  
Eugene J Murphy ◽  
Alex D Rogers

Antarctica offers a unique natural laboratory for undertaking fundamental research on the relationship between climate, evolutionary processes and molecular adaptation. The fragmentation of Gondwana and the development of wide-scale glaciation have resulted in major episodes of extinction and vicariance, as well as driving adaptation to an extreme environment. On shorter time-scales, glacial cycles have resulted in shifts in distribution, range fragmentation and allopatric speciation, and the Antarctic Peninsula is currently experiencing among the most rapid climatic warming on the planet. The recent revolution in molecular techniques has provided a suite of innovative and powerful tools to explore the consequences of these changes, and these are now providing novel insights into evolutionary and ecological processes in Antarctica. In addition, the increasing use of remotely sensed data is providing a large-scale view of the system that allows these processes to be set in a wider spatial context. In these two volumes, we collect a wide range of papers exploring these themes, concentrating on recent advances and emphasizing the importance of spatial and temporal scale in understanding ecological and evolutionary processes in Antarctica.


2000 ◽  
Vol 3 (6) ◽  
pp. 540-550 ◽  
Author(s):  
J.J. Elser ◽  
R.W. Sterner ◽  
E. Gorokhova ◽  
W.F. Fagan ◽  
T.A. Markow ◽  
...  
Keyword(s):  

2019 ◽  
Vol 10 ◽  
pp. 1853-1863
Author(s):  
Kassaye Gurebiyaw Legese ◽  
Taye Melese ◽  
Tadie Mire ◽  
Abebe Birara ◽  
Kefale Eniyew

Soil is a crucial and precious natural resource that govern numerous ecological processes. However, in Ethiopia particularly in north Gondar zone, soil erosion is a severe problem and a major cause of the decline of agricultural productivity. The adoption and diffusion of soil and water conservation practices (SWC), as a way to tackle this challenge, has become an important issue in the development policy agenda in the zone. Therefore, this study was to identify factors affecting Soil conservation investments in the North Gondar zone. Data was collected through interviewed schedule, filed observation and focus group discussion. The multistage sampling technique was employed to select 206 sample households.  Both descriptive and econometrics model was used to analyze the collected data. A multivariate profit (MPV) model was used to analyze the effect of demographic, socioeconomic, market, institutional and biophysical related factors on the interdependent investment decisions of SWC practices using household survey. The MPV model analysis indicates that farmers invest a combination of practices at parcel level by considering substitution and complementarity effects of the practices. The results also revealed that age of household heads, literacy status of household heads, off-farm activity, distance of farmlands from homesteads, tropical livestock unit, and access to training were influence farmers’ investments in SWC practices. The overall results indicate that the identified physical, socioeconomic, and institutional factors influence promote or hinder investments in SWC practice so, policymakers should take into consideration these various factors in designing and implementing SWC policies and Programmers.


2024 ◽  
Vol 74 (10) ◽  
pp. 6139-2024
Author(s):  
MICHAŁ SCHULZ ◽  
ALEKSANDRA ŁOŚ ◽  
PATRYCJA SKOWRONEK ◽  
ANETA STRACHECKA

Coral reefs are the most productive ecosystems on Earth. They ensure the conservation of biodiversity and are a live habitat for 25% of all marine organisms. The main relationship on the coral reef is the symbiosis between corals and algae from the genus Symbiodinium (commonly called zooxanthellae). The authors of this publication have characterized and described the factors limiting the occurrence of coral reefs, including: water temperature, salinity, access to sunlight, contamination, physicochemical and hydromechanical parameters of water. Moreover anthropogenic threats to coral reefs have been specified, including diving tourism, ecological disasters (e.g. oil spills) and the development of marine aquaristics. Rapid changes in the basic living conditions are dangerous for corals and their symbionts and may cause the unsuitability of the new environment resulting in diseases such as coral bleaching. Corals bleaching is a disease associated with the break of the coral and algae relationship which results in a coral reef death on a global scale. Awareness of these negative factors, often related to human activity, may allow us to better understand the ecological processes that are the basis of reef functioning and might enable us to prevent and oppose to the changes and ecological recessions of coral reefs.


1995 ◽  
Vol 31 (8) ◽  
pp. 367-370
Author(s):  
J. Heringa ◽  
H. Hylkema ◽  
M. Kroes ◽  
E. Ludden ◽  
P. G. van Schaick Zillesen

The computer program LAKE simulates a shallow lake ecosystem. The program is based on a mathematical model. In the model the most important aspects of several models for water resources management are integrated (Collins and Wlosinski, 1988; Jørgensen, 1976; Jørgensen et al., 1978; Scheffer, 1988). Furthermore, the model describes several ecological processes that have not yet been described by lake-ecosystem models so far. In the computer program, the mathematical model and an advanced, object oriented, user interface are combined. Following this approach the use of the original research models was extended to a use for the purpose of teaching lake ecology. We suggest that the same approach may be followed to open research models to other groups concerned with water resources management, such as management authorities, industry, agricultural extension, nature conservation and recreation.


2018 ◽  
Vol 6 (14) ◽  
pp. 51 ◽  
Author(s):  
Kristin L. Mercer

Agroecology derives much of its strength from interactions between disciplines that produce a holistic perspective on agricultural systems and issues.  Although ongoing integration of social dynamics into agroecology has strengthened the field, evolution and genetics have not been embraced to the same degree, despite the fact that they have been are discussed in some common agroecology texts.  I argue that the field of agroecology could extend its reach and depth by embracing the evolutionary study of agroecosystems.  Areas of evolutionary inquiry with relevance to agriculture focus on long or short term processes, encompass a range of scales, incorporate molecular or quantitative genetic analyses, and explore ecological processes to differing degrees.


Author(s):  
Gus Mills ◽  
Margaret Mills

This book demonstrates how cheetahs are adapted to arid savannahs like the southern Kalahari, and makes comparisons with other areas, especially the Serengeti. Topics dealt with are: demography and genetic status; feeding ecology, i.e. methods used for studying diet, diets of different demographic groups, individual diet specializations of females, prey selection, the impact of cheetah predation on prey populations, activity regimes and distances travelled per day, hunting behaviour, foraging success and energetics; interspecific competition; spatial ecology; reproductive success and the mating system; and conservation. The major findings show that cheetahs are well adapted to arid ecosystems and are water independent. Cheetah density in the study area was stable at 0.7/100 km2 and the population was genetically diverse. Important prey were steenbok and springbok for females with cubs, gemsbok, and adult ostrich for coalition males, and steenbok, springhares, and hares for single animals. Cheetahs had a density-dependent regulatory effect on steenbok and springbok populations. Females with large cubs had the highest overall food intake. Cheetahs, especially males, were often active at night, and competition with other large carnivores, both by exploitation and interference, was slight. Although predation on small cubs was severe, cub survival to adolescence was six times higher than in the Serengeti. There was no difference in reproductive success between single and coalition males. The conservation priority for cheetahs should be to maintain protected areas over a spectrum of landscapes to allow ecological processes, of which the cheetah is an integral part, to proceed unhindered.


Author(s):  
Pierre Taberlet ◽  
Aurélie Bonin ◽  
Lucie Zinger ◽  
Eric Coissac

Environmental DNA (eDNA), i.e. DNA released in the environment by any living form, represents a formidable opportunity to gather high-throughput and standard information on the distribution or feeding habits of species. It has therefore great potential for applications in ecology and biodiversity management. However, this research field is fast-moving, involves different areas of expertise and currently lacks standard approaches, which calls for an up-to-date and comprehensive synthesis. Environmental DNA for biodiversity research and monitoring covers current methods based on eDNA, with a particular focus on “eDNA metabarcoding”. Intended for scientists and managers, it provides the background information to allow the design of sound experiments. It revisits all steps necessary to produce high-quality metabarcoding data such as sampling, metabarcode design, optimization of PCR and sequencing protocols, as well as analysis of large sequencing datasets. All these different steps are presented by discussing the potential and current challenges of eDNA-based approaches to infer parameters on biodiversity or ecological processes. The last chapters of this book review how DNA metabarcoding has been used so far to unravel novel patterns of diversity in space and time, to detect particular species, and to answer new ecological questions in various ecosystems and for various organisms. Environmental DNA for biodiversity research and monitoring constitutes an essential reading for all graduate students, researchers and practitioners who do not have a strong background in molecular genetics and who are willing to use eDNA approaches in ecology and biomonitoring.


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