A new insight on the effects of iron oxides and dissimilated metal-reducing bacteria on CH4 emissions in constructed wetland matrix systems

2021 ◽  
Vol 320 ◽  
pp. 124296
Author(s):  
Shiyi Cheng ◽  
Congli Qin ◽  
Huijun Xie ◽  
Wenxing Wang ◽  
Zhen Hu ◽  
...  
2011 ◽  
Vol 45 (3) ◽  
pp. 951-957 ◽  
Author(s):  
Andrew E. Plymale ◽  
James K. Fredrickson ◽  
John M. Zachara ◽  
Alice C. Dohnalkova ◽  
Steve M. Heald ◽  
...  

1997 ◽  
Vol 61 (21) ◽  
pp. 4621-4632 ◽  
Author(s):  
Chuanlun Zhang ◽  
Shi Liu ◽  
Tommy J. Phelps ◽  
Dave R. Cole ◽  
Juske Horita ◽  
...  

2018 ◽  
Vol 84 (20) ◽  
Author(s):  
Lulu Liu ◽  
Shisheng Li ◽  
Sijing Wang ◽  
Ziyang Dong ◽  
Haichun Gao

ABSTRACT Shewanella oneidensis is an extensively studied bacterium capable of respiring minerals, including a variety of iron ores, as terminal electron acceptors (EAs). Although iron plays an essential and special role in iron respiration of S. oneidensis, little has been done to date to investigate the characteristics of iron transport in this bacterium. In this study, we found that all proteins encoded by the pub-putA-putB cluster for putrebactin (S. oneidensis native siderophore) synthesis (PubABC), recognition-transport of Fe3+-putrebactin across the outer membrane (PutA), and reduction of ferric putrebactin (PutB) are essential to putrebactin-mediated iron uptake. Although homologs of PutA are many, none can function as its replacement, but some are able to work with other bacterial siderophores. We then showed that Fe2+-specific Feo is the other primary iron uptake system, based on the synthetical lethal phenotype resulting from the loss of both iron uptake routes. The role of the Feo system in iron uptake appears to be more critical, as growth is significantly impaired by the absence of the system but not of putrebactin. Furthermore, we demonstrate that hydroxyl acids, especially α-types such as lactate, promote iron uptake in a Feo-dependent manner. Overall, our findings underscore the importance of the ferrous iron uptake system in metal-reducing bacteria, providing an insight into iron homeostasis by linking these two biological processes. IMPORTANCE S. oneidensis is among the first- and the best-studied metal-reducing bacteria, with great potential in bioremediation and biotechnology. However, many questions regarding mechanisms closely associated with those applications, such as iron homeostasis, including iron uptake, export, and regulation, remain to be addressed. Here we show that Feo is a primary player in iron uptake in addition to the siderophore-dependent route. The investigation also resolved a few puzzles regarding the unexpected phenotypes of the putA mutant and lactate-dependent iron uptake. By elucidating the physiological roles of these two important iron uptake systems, this work revealed the breadth of the impacts of iron uptake systems on the biological processes.


SoilREns ◽  
2021 ◽  
Vol 18 (2) ◽  
Author(s):  
Pujawati Suryatmana ◽  
Apong Sandrawati ◽  
Ikrar Nusantara Putra ◽  
Nadia N. Kamaluddin

Acid mine drainage (AMD) is a waste product from coal mining process. Acidic waste will impose a serious environmental issue such as organism annihilation and destruction of environmental ecosystem. Proper AMD management is required in order to restore polluted water to the proper standard condition. The Constructed Wetland system with Akar Wangi (Vetiveria zizanioides L.) and various organic growth medium compositions and sulphate-reducing bacteria and the composition of the media for several types of organic matter with sulfate-reducing bacteria (SRB) inoculation as stimulant was deemed a promising solution. This study was designed in randomized block design (RBD) consisted of nine treatments with three replicates. The treatments were: (A) = without organic matter and without SRB inoculation (control), (B) = 100% compost, (C) = 100% sawdust, (D) = 50% compost + 50% sawdust, (E ) = no organic matter + SRB inoculation (105 MPN ml-1), (F) = 100% compost + SRB inoculation, (G) = 100% sawdust + SRB inoculation, H = 50% compost + 50% sawdust + SRB inoculation, I = 75% compost + 25% sawdust + SRB inoculation. Results showed that 100% compost and SRB application increased polluted water pH. Application of 100% sawdust with or without SRB inoculation gave the highest reduction in sulfate content. SRB also has the potential to increase the height of Akar Wangi plant.


2006 ◽  
Vol 72 (9) ◽  
pp. 6288-6298 ◽  
Author(s):  
Eoin L. Brodie ◽  
Todd Z. DeSantis ◽  
Dominique C. Joyner ◽  
Seung M. Baek ◽  
Joern T. Larsen ◽  
...  

ABSTRACT Reduction of soluble uranium U(VI) to less-soluble uranium U(IV) is a promising approach to minimize migration from contaminated aquifers. It is generally assumed that, under constant reducing conditions, U(IV) is stable and immobile; however, in a previous study, we documented reoxidation of U(IV) under continuous reducing conditions (Wan et al., Environ. Sci. Technol. 2005, 39:6162-6169). To determine if changes in microbial community composition were a factor in U(IV) reoxidation, we employed a high-density phylogenetic DNA microarray (16S microarray) containing 500,000 probes to monitor changes in bacterial populations during this remediation process. Comparison of the 16S microarray with clone libraries demonstrated successful detection and classification of most clone groups. Analysis of the most dynamic groups of 16S rRNA gene amplicons detected by the 16S microarray identified five clusters of bacterial subfamilies responding in a similar manner. This approach demonstrated that amplicons of known metal-reducing bacteria such as Geothrix fermentans (confirmed by quantitative PCR) and those within the Geobacteraceae were abundant during U(VI) reduction and did not decline during the U(IV) reoxidation phase. Significantly, it appears that the observed reoxidation of uranium under reducing conditions occurred despite elevated microbial activity and the consistent presence of metal-reducing bacteria. High-density phylogenetic microarrays constitute a powerful tool, enabling the detection and monitoring of a substantial portion of the microbial population in a routine, accurate, and reproducible manner.


2007 ◽  
Vol 41 (8) ◽  
pp. 2764-2769 ◽  
Author(s):  
Gary A. Icopini ◽  
Hakim Boukhalfa ◽  
Mary P. Neu

Sign in / Sign up

Export Citation Format

Share Document