Draft genome sequence of a KPC-2-producing Klebsiella pneumoniae ST340 carrying bla CTX-M-15 and bla CTX-M-59 genes: a rich genome of mobile genetic elements and genes encoding antibiotic resistance

2018 ◽  
Vol 13 ◽  
pp. 35-36 ◽  
Author(s):  
Tiago Casella ◽  
Andressa Batista Zequini de Morais ◽  
Diego Diniz de Paula Barcelos ◽  
Fernanda Modesto Tolentino ◽  
Louise Teixeira Cerdeira ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Mobile Genetic Elements ◽  
Draft Genome Sequence ◽  
Genetic Elements ◽  
Genes Encoding

scholarly journals Draft Genome Sequence of a Klebsiella pneumoniae Strain (New Sequence Type 2357) Carrying Tn 3926

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Xing-bei Weng ◽  
Zu-huang Mi ◽  
Chun-xin Wang ◽  
Jian-ming Zhu
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Human Blood ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Drug Resistant ◽  
Beta Lactams ◽  
Resistant Genes ◽  
Genes Encoding

We present the draft genome sequence of a Klebsiella pneumoniae carbapenemase–producing sequence type 2357 (ST2357) strain, NB60, which contains drug-resistant genes encoding resistance to beta-lactams, fluoroquinolones, aminoglycosides, trimethoprim-sulfamethoxazole, colistin, macrolides, and tetracycline. Strain NB60 was isolated from human blood, making it an important tool for studying K. pneumoniae pathogenesis.

scholarly journals High-Quality Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Enterococcus faecium VRE16

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Suelen Scarpa de Mello ◽  
Daria Van Tyne ◽  
Andrei Nicoli Gebieluca Dabul ◽  
Michael S. Gilmore ◽  
Ilana L. B. C. Camargo
Keyword(s):  
Antibiotic Resistance ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Enterococcus Faecium ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Commensal Bacterium ◽  
High Quality

Specific lineages of the commensal bacterium Enterococcus faecium belonging to CC17, especially ST412, have been isolated from patients in several hospitals worldwide and harbor antibiotic resistance genes and virulence factors. Here, we report a high-quality draft genome sequence and highlight features of E. faecium VRE16, a representative of this ST.

scholarly journals Draft Genome Sequence of Klebsiella pneumoniae 704SK6, an OXA-48- and CTX-M-15-Encoding Wastewater Isolate

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Roger Marti ◽  
Roger Stephan ◽  
Jochen Klumpp ◽  
Magdalena Nüesch-Inderbinen ◽  
Jörg Hummerjohann ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT The Swiss wastewater isolate Klebsiella pneumoniae 704SK6, encoding OXA-48 and CTX-M-15 β-lactamases, was fully sequenced. The assembly resulted in an open chromosome of 5,208,104 bp in size (G+C content, 57.6%) and four closed plasmid sequences of 209,651, 197,670, 65,998, and 63,605 bp in size.

scholarly journals Draft Genome Sequence of Shewanella sp. Strain ISO12, a Candidate Probiotic Isolated from the Intestine of Fundulus heteroclitus

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Harold J. Schreier
Keyword(s):  
Genome Sequence ◽  
Fundulus Heteroclitus ◽  
Draft Genome ◽  
Bioinformatic Analysis ◽  
Draft Genome Sequence ◽  
Genes Encoding ◽  
Probiotic Activity

ABSTRACT The genome of Shewanella sp. strain ISO12, which was isolated from the intestine of wild-caught Fundulus heteroclitus, was sequenced and is reported here. Bioinformatic analysis revealed genes encoding the bacteriocin marinocine and those potentially associated with probiotic activity. The genome sequence will assist in further identifying probiotic and other antibacterial processes.

scholarly journals Draft Genome Sequence of Corynebacterium aurimucosum UMB7769, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Samantha Eskandar ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Draft Genome ◽  
Gc Content ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Corynebacterium aurimucosum UMB7769, isolated from the female urinary tract. The size of the genome is 2,731,818 bp, assembled in 50 contigs, with an observed GC content of 60.9% and an N50 score of 129,518 bp. Annotation revealed 31 antibiotic resistance genes.

scholarly journals Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Mamitina Alain Noah Rabenandrasana ◽  
Lala Fanomezantsoa Rafetrarivony ◽  
Lalainasoa Odile Rivoarilala ◽  
Vincent Enouf ◽  
Annick Lalaina Robinson ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Blood Culture ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Chryseobacterium Indologenes

We report here the draft genome sequence of a Chryseobacterium indologenes strain, isolated from a blood culture of a 2.2-year-old child admitted to the hospital for vomiting and coughing. The genome was composed of 5,063,674 bp and had 37.04% GC content. We detected 4,796 genes with predicted protein-coding functions, including those associated with antibiotic resistance.

scholarly journals Draft Genome Sequence of Klebsiella pneumoniae UMB8492, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Suma Gondi ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Overactive Bladder ◽  
Klebsiella Pneumoniae ◽  
Female Patient ◽  
Urine Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

Here, we present the draft genome sequence for Klebsiella pneumoniae strain UMB8492, isolated from a urine sample from a female patient with overactive bladder (OAB) symptoms. The assembled genome has a length of 5,660,575 bp, a G+C content of 57.19%, and an N 50 value of 136,315 bp.

scholarly journals Draft Genome Sequence of Lactobacillus kefiri SGL 13, a Potential Probiotic Strain Isolated from Kefir Grains

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
Federica Federici ◽  
Laura Manna ◽  
Eleonora Rizzi ◽  
Elena Galantini ◽  
Umberto Marini
Keyword(s):  
Antibiotic Resistance ◽  
Horizontal Gene Transfer ◽  
Genome Sequence ◽  
Draft Genome ◽  
Probiotic Strain ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Kefir Grains ◽  
Lactobacillus Kefiri ◽  
Antibiotic Resistance Analysis

In this report, we present the draft genome sequence of a newly discovered potential probiotic strain of Lactobacillus kefiri, SGL 13, isolated from kefir grains. Antibiotic resistance analysis did not reveal evidence of interspecific horizontal gene transfer since the identified bacitracin resistance gene does not have mobile genetic elements.

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