A study of the response of chlorophyll-a biomass to a winter upwelling event off Western Iberia using SeaWiFS and in situ data

2005 ◽  
Vol 53 (1-4) ◽  
pp. 87-107 ◽  
Author(s):  
Ana C. Ribeiro ◽  
Álvaro Peliz ◽  
A. Miguel P. Santos
Author(s):  
A. Manuel ◽  
A. C. Blanco ◽  
A. M. Tamondong ◽  
R. Jalbuena ◽  
O. Cabrera ◽  
...  

Abstract. Laguna Lake, the Philippines’ largest freshwater lake, has always been historically, economically, and ecologically significant to the people living near it. However, as it lies at the center of urban development in Metro Manila, it suffers from water quality degradation. Water quality sampling by current field methods is not enough to assess the spatial and temporal variations of water quality in the lake. Regular water quality monitoring is advised, and remote sensing addresses the need for a synchronized and frequent observation and provides an efficient way to obtain bio-optical water quality parameters. Optimization of bio-optical models is done as local parameters change regionally and seasonally, thus requiring calibration. Field spectral measurements and in-situ water quality data taken during simultaneous satellite overpass were used to calibrate the bio-optical modelling tool WASI-2D to get estimates of chlorophyll-a concentration from the corresponding Landsat-8 images. The initial output values for chlorophyll-a concentration, which ranges from 10–40 μg/L, has an RMSE of up to 10 μg/L when compared with in situ data. Further refinements in the initial and constant parameters of the model resulted in an improved chlorophyll-a concentration retrieval from the Landsat-8 images. The outputs provided a chlorophyll-a concentration range from 5–12 μg/L, well within the usual range of measured values in the lake, with an RMSE of 2.28 μg/L compared to in situ data.


Author(s):  
Gathot Winarso ◽  
Yennie Marini

The MODIS-estimated chlorophyll-a information was widely used in some operational application in Indonesia. However, there is no information about the performance of MODIS chlorophyll-a in Indonesian seas and there is no data used in development of algorithm was taken in Indonesian seas. Even the algorithm was validated in other area, it is important to know the performance of the algorithm work in Indonesian seas. Performance of MODIS Standard (OC3) algorithm at Indonesian seas was analyzed in this paper. The in-situ chlorophyll-a concentration data was collected during MOMSEI (Monsoon Offset Monitoring and Its Social and Ecosystem Impact) 2012 Cruise 25th April – 12th   May 2012 and also from archived data of the Research and Development Center for Marine Coastal Resources, Agency of Marine and Fisheries Research and Development, Indonesian Ministry of  Marine Affairs and Fisheries. The in-situ data used in this research is located in Indian Ocean the west of Sumatera part and Pacific Ocean the north of Papua Province part. Satellite data which is used is Ocean Color MODIS Level-2 Product that downloaded from NASA and MODIS L-0 from LAPAN Ground Station. MODIS Level 0 from LAPAN then processed to Level-2  using latest SeaDAS Software. The match-up resulted the MNB(%) is -4.8% that means satellite-estimated was underestimate in 4.8 % and RMSE is 0.058. When the data was separated following to the data source, the correlation and trend line equation became better. From MOMSEI Cruise data, the MNB(%) was -18.8% and RMSE 0.05. From Pacific Ocean Data, MNB (%) was -27 % and RMSE 0.049. From SONNE Cruise 2005, MNB (%) was -27 % and RMSE 0.049. MODIS standard algorithm is work well in Indonesia case-1 seawaters, which contain chlorophyll-a only, and derived that influence to the electromagnetic wave.


2020 ◽  
Vol 32 ◽  
pp. 53-63
Author(s):  
Stefan Kazakov ◽  
Valko Biserkov ◽  
Luchezar Pehlivanov ◽  
Stoyan Nedkov

The aim of the study was to compare in situ and remote sensing data, in order to assess the applicability of satellite images in water quality monitoring of floodplain lakes. Two indicators of trophic status were compared: chlorophyll a and total suspended matter. Two lakes on Lower Danube floodplain were selected: Srebarna and Malak Preslavets. Data were obtained in July and August 2018. Sentinel 2 MSI L1c images were analyzed in SeNtinel Application Platform (SNAP), (v. 6.0). According to in situ data, Srebarna Lake indicated status of eutrophication, while Malak Preslavets experienced hypertrophic conditions. Satellite data indicated eutrophic conditions for both lakes. Comparing the results from in situ and satellite data, chlorophyll a showed higher correlation (r = 0.66) and comparable results. On the other hand, significantly overestimation of suspended matter according to satellite data were found, as well weaker correlation (r = 0.57) between both methods. Remote sensing i.e. Sentinel products are emerging as a powerful tool in environmental observation. Although weather conditions could have significant impact on environmental dynamic especially in floodplain lakes, combining and comparing of different methods could improve the preciseness of the methodology as well as assessment reliability.


Water ◽  
2020 ◽  
Vol 12 (7) ◽  
pp. 1954
Author(s):  
Maruf Mortula ◽  
Tarig Ali ◽  
Abdallah Bachir ◽  
Ahmed Elaksher ◽  
Mohamed Abouleish

The last few decades have witnessed a tremendous increase in nutrient levels (phosphorus and nitrogen) in coastal water leading to excessive algal growth (Eutrophication). The presence of large amounts of algae turns the water’s color into green or red, in the case of algal blooms. Chlorophyll-a is often used as an indicator of algal biomass. Due to increased human activities surrounding Dubai creek, there have been eutrophication concerns given the levels of nutrients in that creek. This study aims to map chlorophyll-a in Dubai Creek from WorldView-2 imagery and explore the relationship between chlorophyll-a and other eutrophication indicators. A geometrically- and atmospherically-corrected WorldView-2 image and in-situ data have been utilized to map chlorophyll-a in the creek. A spectral model, developed from the WorldView-2 multispectral image to monitor Chlorophyll-a concentration, yielded 0.82 R2 with interpolated in-situ chlorophyll-a data. To address the time lag between the in-situ data and the image, Landsat 7 Enhanced Thematic Mapper Plus (ETM+) images were used to demonstrate the accuracy of the WorldView-2 model. The images, acquired on 20 May and 23 July 2012, were processed to extract chlorophyll-a band ratios (Band 4/Band 3) following the standard approach. Based on the availability, the 20 May image acquisition date is the closest to the middle of Quarter 2 (Q2) of the in-situ data (15 May). The 23 July 2012 image acquisition date is the closest to the WorldView-2 image date (24 July). Another model developed to highlight the relationship between spectral chlorophyll-a levels, and total nitrogen and orthophosphate levels, yielded 0.97 R2, which indicates high agreement. Furthermore, the generated models were found to be useful in mapping chlorophyll-a, total nitrogen, and orthophosphate, without the need for costly in-situ data acquisition efforts.


Author(s):  
Alessandro Rhadamek Alves Pereira ◽  
João Batista Lopes ◽  
Giovana Mira de Espindola ◽  
Carlos Ernando da Silva

Recently, the Poti river mouth region has experienced environmental impacts that resulted in a change of landscape in its dry season, highlighting the eutrophication and proliferation of phytoplankton, algae, cyanobacteria and aquatic plants. Considering the aspects related to water-quality monitoring in the semiarid region of Brazil from remote sensing, this study aimed to evaluate the performance of Sentinel-2A satellite data in the retrieval of chlorophyll-a concentration in Poti River in Teresina, Piaui, Brazil. The chlorophyll-a concentration retrieval and mapping methodology involved the study of the water surface reflectance in Sentinel-2A images and their correlation with the chlorophyll-a data collected in situ during the years 2016 and 2017. The results generated by the Chl-1, Ha et al. (2017), Chl-2, Page et al. (2018), and Chl-3, Kuhn et al. (2019) equations show the need for calibrating the algorithms used for the Poti River water components. However, the empirical algorithm Chl-2 shows a correlation has been established to identify the spatiotemporal variation of chlorophyll-a concentration along the Poti River broadly and not punctually. The spatial distribution of this pigment in maps derived from Sentinel-2A is consistent with the pattern of occurrence determined by the in situ data. Therefore, the MSI sensor proved to be a tool suitable for the retrieval and monitoring of chlorophyll-a concentration along the Poti River.


2012 ◽  
Vol 9 (6) ◽  
pp. 2111-2125 ◽  
Author(s):  
H. Lavigne ◽  
F. D'Ortenzio ◽  
H. Claustre ◽  
A. Poteau

Abstract. Understanding the ocean carbon cycle requires a precise assessment of phytoplankton biomass in the oceans. In terms of numbers of observations, satellite data represent the largest available data set. However, as they are limited to surface waters, they have to be merged with in situ observations. Amongst the in situ data, fluorescence profiles constitute the greatest data set available, because fluorometers have operated routinely on oceanographic cruises since the 1970s. Nevertheless, fluorescence is only a proxy of the total chlorophyll a concentration and a data calibration is required. Calibration issues are, however, sources of uncertainty, and they have prevented a systematic and wide range exploitation of the fluorescence data set. In particular, very few attempts to standardize the fluorescence databases have been made. Consequently, merged estimations with other data sources (e.g. satellite) are lacking. We propose a merging method to fill this gap. It consists firstly in adjusting the fluorescence profile to impose a zero chlorophyll a concentration at depth. Secondly, each point of the fluorescence profile is then multiplied by a correction coefficient, which forces the chlorophyll a integrated content measured on the fluorescence profile to be consistent with the concomitant ocean colour observation. The method is close to the approach proposed by Boss et al. (2008) to correct fluorescence data of a profiling float, although important differences do exist. To develop and test our approach, in situ data from three open ocean stations (BATS, HOT and DYFAMED) were used. Comparison of the so-called "satellite-corrected" fluorescence profiles with concomitant bottle-derived estimations of chlorophyll a concentration was performed to evaluate the final error (estimated at 31%). Comparison with the Boss et al. (2008) method, using a subset of the DYFAMED data set, demonstrated that the methods have similar accuracy. The method was applied to two different data sets to demonstrate its utility. Using fluorescence profiles at BATS, we show that the integration of "satellite-corrected" fluorescence profiles in chlorophyll a climatologies could improve both the statistical relevance of chlorophyll a averages and the vertical structure of the chlorophyll a field. We also show that our method could be efficiently used to process, within near-real time, profiles obtained by a fluorometer deployed on autonomous platforms, in our case a bio-optical profiling float. The application of the proposed method should provide a first step towards the generation of a merged satellite/fluorescence chlorophyll a product, as the "satellite-corrected" profiles should then be consistent with satellite observations. Improved climatologies with more consistent satellite and in situ data are likely to enhance the performance of present biogeochemical models.


2021 ◽  
Vol 13 (1) ◽  
pp. 85-97
Author(s):  
Ioannis Moutzouris-Sidiris ◽  
Konstantinos Topouzelis

Abstract The objective of this study is to evaluate the efficiency of two well-known algorithms (Ocean Colour 4 for MERIS [OC4Me] and neural net [NN]) used in the calculation of chlorophyll-a (Chl-a) from the Sentinel-3 Ocean and Land Colour Instrument (OLCI) compared to in situ measurements covering the Mediterranean Sea. In situ data set, obtained from the Copernicus Marine Environmental Monitoring Service (CMEMS) and more specifically from the data set with the title INSITU_MED_NRT_OBSERVATIONS_013_035, and Chl-a values at different depths were extracted. The concentration of Chl-a at a penetration depth was calculated. Then, water was classified into two categories, Case-1 and Case-2. For Case-2 waters, the OC4Me presents a moderate correlation with the in situ data for a time window of 0–2 h. In contrast with the NN algorithm, where very weak correlations were calculated, lower values of the statistical index of Bias for Case-1 waters were calculated for the OC4Me algorithm. Higher values of Pearson correlation were calculated (r > 0.5) for OC4Me algorithm than NN. OC4Me performed better than NN.


2020 ◽  
Vol 12 (24) ◽  
pp. 4123
Author(s):  
Michela Sammartino ◽  
Bruno Buongiorno Nardelli ◽  
Salvatore Marullo ◽  
Rosalia Santoleri

Remote sensing data provide a huge number of sea surface observations, but cannot give direct information on deeper ocean layers, which can only be provided by sparse in situ data. The combination of measurements collected by satellite and in situ sensors represents one of the most effective strategies to improve our knowledge of the interior structure of the ocean ecosystems. In this work, we describe a Multi-Layer-Perceptron (MLP) network designed to reconstruct the 3D fields of ocean temperature and chlorophyll-a concentration, two variables of primary importance for many upper-ocean bio-physical processes. Artificial neural networks can efficiently model eventual non-linear relationships among input variables, and the choice of the predictors is thus crucial to build an accurate model. Here, concurrent temperature and chlorophyll-a in situ profiles and several different combinations of satellite-derived surface predictors are used to identify the optimal model configuration, focusing on the Mediterranean Sea. The lowest errors are obtained when taking in input surface chlorophyll-a, temperature, and altimeter-derived absolute dynamic topography and surface geostrophic velocity components. Network training and test validations give comparable results, significantly improving with respect to Mediterranean climatological data (MEDATLAS). 3D fields are then also reconstructed from full basin 2D satellite monthly climatologies (1998–2015) and resulting 3D seasonal patterns are analyzed. The method accurately infers the vertical shape of temperature and chlorophyll-a profiles and their spatial and temporal variability. It thus represents an effective tool to overcome the in-situ data sparseness and the limits of satellite observations, also potentially suitable for the initialization and validation of bio-geophysical models.


2011 ◽  
Vol 8 (6) ◽  
pp. 11899-11939
Author(s):  
H. Lavigne ◽  
F. D'Ortenzio ◽  
H. Claustre ◽  
A. Poteau

Abstract. Understanding the ocean carbon cycle requires a precise assessment of phytoplankton biomass in the oceans. In terms of numbers of observations, satellite data represents the largest available data set. However, as they are limited to surface waters, they have to be merged with in situ observations. Amongst the in situ data, fluorescence profiles constitute the greatest data set available, because fluorometers operate routinely on oceanographic cruise since the seventies. Nevertheless, fluorescence is only a proxy of the Total Chlorophyll-a concentration and a data calibration is required. Calibration issues are, however, source of uncertainty and they have prevented a systematic and wide range exploitation of the fluorescence data set. In particular, very few attempts to standardize the fluorescence data bases exist. Consequently, merged estimations with other data sources (i.e. satellite) are lacking. We propose a merging method to fill this gap. It consists firstly, in adjusting the fluorescence profile to impose a zero Chlorophyll-a concentration at depth. Secondly, each point of the fluorescence profile is then multiplied by a correction coefficient which forces the Chlorophyll-a integrated content measured on the fluorescence profile to be consistent with the concomitant ocean color observation. The method is close to the approach proposed by Boss et al. (2008) to calibrate fluorescence data of a profiling float, although important differences do exist. To develop and test our approach, in situ data from three open ocean stations (BATS, HOT and DYFAMED) were used. Comparison of the so-called "satellite-corrected" fluorescence profiles with concomitant bottle derived estimations of Chlorophyll-a concentration was performed to evaluate the final error, which resulted to be of about 31 %. Comparison with the Boss et al. (2008) method, carried out on a subset of the DYFAMED data set simulating a profiling float time series, demonstrated that the methods have similar accuracy. Applications of the method were then explored on two different data sets. Using fluorescence profiles at BATS, we show that the integration of "satellite-corrected" fluorescence profiles in Chlorophyll-a climatologies could improve both the statistical relevance of Chlorophyll-a averages and the vertical structure of the Chlorophyll-a field. We also show that our method could be efficiently used to process, within near-real time, profiles obtained by a fluorometer deployed on autonomous platforms, in our case a bio-optical profiling float. The wide application of the proposed method should provide a first step toward the generation of a merged satellite/fluorescence Chlorophyll-a product, as the "satellite-corrected" profiles should then be consistent with satellite observations. Improved climatologies and more consistent satellite and in situ data (comprising those from autonomous platforms) should strongly enhance the performance of present biogeochemical models.


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