Analysis of the Common Genetic Variants of the Human Gc System in Plasma and Bloodstains by Isoelectric Focusing in Immobilized pH Gradients

1984 ◽  
Vol 24 (5) ◽  
pp. 519-528 ◽  
Author(s):  
Sara A. Westwood ◽  
J.G. Sutton ◽  
D.J. Werrett
1992 ◽  
Vol 38 (4) ◽  
pp. 577-580 ◽  
Author(s):  
J O Jeppsson ◽  
R Einarsson

Abstract In this method for automatically running and staining isoelectric focusing (IEF) gels, pre-made dehydrated polyacrylamide gels were rehydrated before assays run with the PhastSystem (Pharmacia LKB Biotechnology). The typing of genetic variants of hemoglobin and alpha 1-antitrypsin in narrow pH gradients (pH 6.7-7.7 and 4.2-4.9, respectively) was simple, convenient, and reproducible. The clinically important variants of alpha 1-antitrypsin (ZZ and SZ) were identified from serum or dried blood on filter paper. The fast screening of abnormal hemoglobin samples (HbS) for cases in clinical medicine was easily performed. The total analysis time for the phenotyping with conventional protein staining was approximately 60 min.


2009 ◽  
Vol 127 (3) ◽  
pp. 303-314 ◽  
Author(s):  
Manit Nuinoon ◽  
Wattanan Makarasara ◽  
Taisei Mushiroda ◽  
Iswari Setianingsih ◽  
Pustika Amalia Wahidiyat ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Lettine van den Brink ◽  
Karina O. Brandão ◽  
Loukia Yiangou ◽  
Albert Blanch-Asensio ◽  
Mervyn P. H. Mol ◽  
...  

While rare mutations in ion channel genes are primarily responsible for inherited cardiac arrhythmias, common genetic variants are also an important contributor to the clinical heterogeneity observed among mutation carriers. The common single nucleotide polymorphism (SNP) KCNH2-K897T is associated with QT interval duration, but its influence on the disease phenotype in patients with long QT syndrome type 2 (LQT2) remains unclear. Human induced pluripotent stem cells (hiPSCs), coupled with advances in gene editing technologies, are proving an invaluable tool for modeling cardiac genetic diseases and identifying variants responsible for variability in disease expressivity. In this study, we have used isogenic hiPSC-derived cardiomyocytes (hiPSC-CMs) to establish the functional consequences of having the KCNH2-K897T SNP in cis- or trans-orientation with LQT2-causing missense variants either within the pore-loop domain (KCNH2A561T/WT) or tail region (KCNH2N996I/WT) of the potassium ion channel, human ether-a-go-go-related gene (hERG). When KCNH2-K897T was on the same allele (cis) as the primary mutation, the hERG channel in hiPSC-CMs exhibited faster activation and deactivation kinetics compared to their trans-oriented counterparts. Consistent with this, hiPSC-CMs with KCNH2-K897T in cis orientation had longer action and field potential durations. Furthermore, there was an increased occurrence of arrhythmic events upon pharmacological blocking of hERG. Collectively, these results indicate that the common polymorphism KCNH2-K897T differs in its influence on LQT2-causing KCNH2 mutations depending on whether it is present in cis or trans. This study corroborates hiPSC-CMs as a powerful platform to investigate the modifying effects of common genetic variants on inherited cardiac arrhythmias and aids in unraveling their contribution to the variable expressivity of these diseases.


2013 ◽  
Vol 49 (7) ◽  
pp. 1578-1587 ◽  
Author(s):  
Aung Ko Win ◽  
John L. Hopper ◽  
Daniel D. Buchanan ◽  
Joanne P. Young ◽  
Albert Tenesa ◽  
...  

1997 ◽  
Vol 64 (4) ◽  
pp. 525-534 ◽  
Author(s):  
ISIDRA RECIO ◽  
MERCEDES RAMOS ◽  
LOURDES AMIGO

Polymorphism of ovine αs1-caseins was studied by capillary electrophoresis at pH 3·0±0·1. Individual caseins (CN) were selected according to their genetic variants, as determined by PAGE and isoelectric focusing. The ovine caseins, containing different genetic variants of αs1-CN and αs2-CN, were fractionated by cation-exchange FPLC®. The αs1-CN variants A, B and C, and the fast moving αs2-CN variant were identified by a capillary electrophoresis method. The fast moving αs2-CN variant, so-called for its behaviour in PAGE, also had a faster electrophoretic mobility than the common αs2-CN when analysed by the present technique. The capillary electrophoresis method gave excellent, rapid, automated separation of αs1-CN and αs2-CN variants and was suitable for screening studies.


1982 ◽  
Vol 3 (6) ◽  
pp. 342-345 ◽  
Author(s):  
Hartwig Cleve ◽  
Walburgis Patutschnick ◽  
Wilhelm Postel ◽  
Johann Weser ◽  
Angelika Görg

Thorax ◽  
2022 ◽  
pp. thoraxjnl-2021-217693
Author(s):  
Haruhiko Furusawa ◽  
Anna L Peljto ◽  
Avram D Walts ◽  
Jonathan Cardwell ◽  
Philip L Molyneaux ◽  
...  

A subset of patients with hypersensitivity pneumonitis (HP) develop lung fibrosis that is clinically similar to idiopathic pulmonary fibrosis (IPF). To address the aetiological determinants of fibrotic HP, we investigated whether the common IPF genetic risk variants were also relevant in study subjects with fibrotic HP. Our findings indicate that common genetic variants in TERC, DSP, MUC5B and IVD were significantly associated with fibrotic HP. These findings provide support for a shared etiology and pathogenesis between fibrotic HP and IPF.


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