Large scale population structure and gene flow in the planktonic developing periwinkle, Littorina striata, in Macaronesia (Mollusca: Gastropoda)

2000 ◽  
Vol 246 (1) ◽  
pp. 69-83 ◽  
Author(s):  
Hans De Wolf ◽  
Ron Verhagen ◽  
Thierry Backeljau
2006 ◽  
Vol 15 (6) ◽  
pp. 1507-1517 ◽  
Author(s):  
MARIE-FRANCE OSTROWSKI ◽  
JACQUES DAVID ◽  
SYLVAIN SANTONI ◽  
HEATHER MCKHANN ◽  
XAVIER REBOUD ◽  
...  

2021 ◽  
Author(s):  
Simon Dures ◽  
Chris Carbone ◽  
Andrew J Loveridge ◽  
Glyn Maude ◽  
Neil Midland ◽  
...  

Abstract Context: There has been limited research identifying large-scale functional connectivity of wildlife populations across sub-Saharan Africa, despite the increased focus on transboundary conservation networks. Objectives: This study set out to assess the functional connectivity of a highly mobile predator of conservation concern across the Kavango-Zambezi transboundary conservation area (KAZA) and the northern Central Kalahari Game Reserve (CKGR), covering almost 300,000km2 of Botswana, Namibia, Zambia and Zimbabwe.Methods: We analysed the nuclear diversity of 204 individual lions from across the metapopulation using Bayesian and multivariate statistics to assess population structure and recent migration. A maximum-likelihood method was used to determine average male dispersal distances to determine the potential for functional connectivity across the region.Results: The results are consistent with work identifying the existence of ecotypic differences between wetland and dryland lions, but also indicate hierarchical population structure further dividing the population into four geographic clusters; the Okavango Delta, the Central Kalahari, Kafue National Park, and the Hwange-Chobe complex. Analysis of dispersal distances of males suggests that reconnecting the clusters through conservation intervention should be successful in improving gene flow and connectivity across the region. Conclusions: While trans-boundary conservation areas may currently have limited gene flow and connectivity, there is potential for the restoration of functional connectivity via the natural dispersal of highly mobile species. However, the matrix of habitat through which such dispersing animals must traverse must be conducive to their movement and survival, highlighting the importance of land outside protected areas for the preservation of highly mobile animals such as lions.


2014 ◽  
Author(s):  
Desislava Petkova ◽  
John Novembre ◽  
Matthew Stephens

Genetic data often exhibit patterns that are broadly consistent with "isolation by distance" - a phenomenon where genetic similarity tends to decay with geographic distance. In a heterogeneous habitat, decay may occur more quickly in some regions than others: for example, barriers to gene flow can accelerate the genetic differentiation between groups located close in space. We use the concept of "effective migration" to model the relationship between genetics and geography: in this paradigm, effective migration is low in regions where genetic similarity decays quickly. We present a method to quantify and visualize variation in effective migration across the habitat, which can be used to identify potential barriers to gene flow, from geographically indexed large-scale genetic data. Our approach uses a population genetic model to relate underlying migration rates to expected pairwise genetic dissimilarities, and estimates migration rates by matching these expectations to the observed dissimilarities. We illustrate the potential and limitations of our method using simulations and data from elephant, human, and Arabidopsis thaliana populations. The resulting visualizations highlight important features of the spatial population structure that are difficult to discern using existing methods for summarizing genetic variation such as principal components analysis.


PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e5380 ◽  
Author(s):  
Christopher S. Moore ◽  
Matthew J. Ruocchio ◽  
April M.H. Blakeslee

Many species of fish produce larvae that undergo a prolonged dispersal phase. However, evidence from a number of recent studies on demersal fishes suggests that the dispersal of propagules may not be strongly correlated with gene flow. Instead, other factors like larval behavior and the availability of preferred settlement habitat may be more important to maintaining population structure. We used an ecologically important benthic fish species, Gobiosoma bosc (naked goby), to investigate local and regional scale population structure and gene flow along a salinity gradient (∼3 ppt to ∼18 ppt) in two North Carolina estuaries. G. bosc is an abundant and geographically widespread species that requires complex but patchy microhabitat (e.g. oyster reefs, rubble, woody debris) for reproduction and refuge. We sequenced 155 fish from 10 sites, using a common barcoding gene (COI). We also included recent sequence data from GenBank to determine how North Carolina populations fit into the larger biogeographic understanding of this species. In North Carolina, we found a significant amount of gene flow within and between estuaries. Our analysis also showed high predicted genetic diversity based upon a large number of rare haplotypes found within many of our sampled populations. Moreover, we detected a number of new haplotypes in North Carolina that had not yet been observed in prior work. Sampling along a salinity gradient did not reveal any significant positive or negative correlations between salinity and genetic diversity, nor the proportion of singleton haplotypes, with the exception of a positive correlation between salinity standard deviation and genetic diversity. We also found evidence that an introduced European population of naked gobies may have originated from an Atlantic source population. Altogether, this system offers a compelling way to evaluate whether factors other than dispersal per se mediate recruitment in an estuarine-dependent species of fish with a larval dispersal phase. It also demonstrates the importance of exploring both smaller and larger scale population structure in marine organisms to better understand local and regional patterns of population connectivity and gene flow.


2006 ◽  
Vol 112 (6) ◽  
pp. 1104-1114 ◽  
Author(s):  
Karl J. Schmid ◽  
Ottó Törjék ◽  
Rhonda Meyer ◽  
Heike Schmuths ◽  
Matthias H. Hoffmann ◽  
...  

2017 ◽  
Vol 197 ◽  
pp. 45-53 ◽  
Author(s):  
Marcos Alaniz Rodrigues ◽  
Luiz Felipe Cestari Dumont ◽  
Cléverson Rannieri Meira dos Santos ◽  
Fernando D'Incao ◽  
Steven Weiss ◽  
...  

2014 ◽  
Vol 15 (6) ◽  
pp. 1381-1392 ◽  
Author(s):  
Jennifer M. Seddon ◽  
Jennifer R. Ovenden ◽  
Helen L. Sneath ◽  
Damien Broderick ◽  
Christine L. Dudgeon ◽  
...  

2004 ◽  
Vol 70 (9) ◽  
pp. 5698-5700 ◽  
Author(s):  
Patricia Escobar-Páramo ◽  
Karine Grenet ◽  
Arnaud Le Menac'h ◽  
Luc Rode ◽  
Emmanuelle Salgado ◽  
...  

ABSTRACT The study of several Escherichia coli intestinal commensal isolates per individual in 265 healthy human subjects belonging to seven populations distributed worldwide showed that the E. coli population is highly structured, with major differences between the tropical and temperate populations.


2010 ◽  
Vol 7 (1) ◽  
Author(s):  
HC Prasanna ◽  
D P Sinha ◽  
Ajay Verma ◽  
Major Singh ◽  
Bijendra Singh ◽  
...  

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