The Candida albicans gene encoding the cytoplasmic leucyl-tRNA synthetase: implications for the evolution of CUG codon reassignment

Gene ◽  
2001 ◽  
Vol 275 (1) ◽  
pp. 133-140 ◽  
Author(s):  
Justin M. O'Sullivan ◽  
Marian J. Mihr ◽  
Manuel A.S. Santos ◽  
Mick F. Tuite
2000 ◽  
Vol 28 (5) ◽  
pp. A186-A186
Author(s):  
J. M. O'sullivan ◽  
E. Chukeatirote ◽  
S. Massey ◽  
B. Davenport ◽  
P. J. Brown ◽  
...  

DNA Sequence ◽  
1991 ◽  
Vol 1 (4) ◽  
pp. 251-261 ◽  
Author(s):  
P. Glaser ◽  
F. Kunst ◽  
M. Débarbouillé ◽  
A. Vertès ◽  
A. Danchin ◽  
...  

2000 ◽  
Vol 182 (6) ◽  
pp. 1515-1522 ◽  
Author(s):  
Leah E. Cowen ◽  
Dominique Sanglard ◽  
David Calabrese ◽  
Caroline Sirjusingh ◽  
James B. Anderson ◽  
...  

ABSTRACT Adaptation to inhibitory concentrations of the antifungal agent fluconazole was monitored in replicated experimental populations founded from a single, drug-sensitive cell of the yeast Candida albicans and reared over 330 generations. The concentration of fluconazole was maintained at twice the MIC in six populations; no fluconazole was added to another six populations. All six replicate populations grown with fluconazole adapted to the presence of drug as indicated by an increase in MIC; none of the six populations grown without fluconazole showed any change in MIC. In all populations evolved with drug, increased fluconazole resistance was accompanied by increased resistance to ketoconazole and itraconazole; these populations contained ergosterol in their cell membranes and were amphotericin sensitive. The increase in fluconazole MIC in the six populations evolved with drug followed different trajectories, and these populations achieved different levels of resistance, with distinct overexpression patterns of four genes involved in azole resistance: the ATP-binding cassette transporter genes,CDR1 and CDR2; the gene encoding the target enzyme of the azoles in the ergosterol biosynthetic pathway,ERG11; and the major facilitator gene, MDR1. Selective sweeps in these populations were accompanied by additional genomic changes with no known relationship to drug resistance: loss of heterozygosity in two of the five marker genes assayed and alterations in DNA fingerprints and electrophoretic karyotypes. These results show that chance, in the form of mutations that confer an adaptive advantage, is a determinant in the evolution of azole drug resistance in experimental populations of C. albicans.


2001 ◽  
Vol 183 (1) ◽  
pp. 46-54 ◽  
Author(s):  
Yvonne Weber ◽  
Uwe J. Santore ◽  
Joachim F. Ernst ◽  
Rolf K. Swoboda

ABSTRACT Sec20p is a component of the yeast Saccharomyces cerevisiae secretory pathway that does not have a close homolog in higher eukaryotic cells. To verify the function of Sec20p in other fungal species, we characterized the gene encoding a Sec20p homolog in the human fungal pathogen Candida albicans. The deduced protein has 27% identity with, but is missing about 100 N-terminal residues compared to S. cerevisiae Sec20p, which is part of the cytoplasmic tail interacting with the cytoplasmic protein Tip20p. Because a strain lacking both C. albicans SEC20alleles could not be constructed, we placed SEC20 under transcriptional control of two regulatable promoters, MET3pand PCK1p. Repression of SEC20 expression in these strains prevented (MET3p-SEC20 allele) or retarded (PCK1p-SEC20 allele) growth and led to the appearance of extensive intracellular membranes, which frequently formed stacks. Reduced SEC20 expression in the PCK1p-SEC20strain did not affect morphogenesis but led to a series of hypersensitivity phenotypes including supersensitivity to aminoglycoside antibiotics, to nystatin, to sodium dodecyl sulfate, and to cell wall inhibitors. These results demonstrate the occurrence and function of Sec20p in a fungal species other than S. cerevisiae, but the lack of the N-terminal domain and the apparent absence of a close TIP20 homolog in the C. albicans genome also indicate a considerable diversity in mechanisms of retrograde vesicle traffic in eukaryotes.


2009 ◽  
Vol 8 (6) ◽  
pp. 913-915 ◽  
Author(s):  
D. Tielker ◽  
I. Eichhof ◽  
K.-E. Jaeger ◽  
J. F. Ernst

ABSTRACT Hypoxia is encountered frequently by pathogenic and apathogenic fungi. A codon-adapted gene encoding flavin mononucleotide-based fluorescent protein (CaFbFP) was expressed in Candida albicans and Saccharomyces cerevisiae. Both species produced CaFbFP and fluoresced even during hypoxia, suggesting that oxygen-independent CaFbFP is a useful, novel tool for monitoring hypoxic gene expression in fungi.


Author(s):  
Hiroyuki Kanoh ◽  
Shigeru Nakashima ◽  
Yutong Zhao ◽  
Yoko Sugiyama ◽  
Yasuo Kitajima ◽  
...  

Genomics ◽  
1994 ◽  
Vol 19 (2) ◽  
pp. 280-290 ◽  
Author(s):  
Eva Kaiser ◽  
Bing Hu ◽  
Stefanie Becher ◽  
Dirk Eberhard ◽  
Beate Schray ◽  
...  

Author(s):  
Niko Bausch ◽  
Laurence Seignovert ◽  
Melanie Beaulande ◽  
Reuben Leberman ◽  
Michael Härtlein

2005 ◽  
Vol 51 (6) ◽  
pp. 385-392 ◽  
Author(s):  
Pedro Felipe Esteban ◽  
Inmaculada Ríos ◽  
Raúl García ◽  
Encarnación Dueñas ◽  
Jesús Plá ◽  
...  

Microbiology ◽  
2011 ◽  
Vol 157 (6) ◽  
pp. 1841-1849 ◽  
Author(s):  
Monika Coton ◽  
María Fernández ◽  
Hein Trip ◽  
Victor Ladero ◽  
Niels L. Mulder ◽  
...  

A sporulated lactic acid bacterium (LAB) isolated from cider must was shown to harbour the tdc gene encoding tyrosine decarboxylase. The isolate belonged to the Sporolactobacillus genus and may correspond to a novel species. The ability of the tdc-positive strain, Sporolactobacillus sp. strain P3J, to produce tyramine in vitro was demonstrated by using HPLC. A 7535 bp nucleotide sequence harbouring the putative tdc gene was determined. Analysis of the obtained sequence showed that four tyramine production-associated genes [tyrosyl-tRNA synthetase (tyrS), tyrosine decarboxylase (tdc), tyrosine permease (tyrP) and Na+/H+ antiporter (nhaC)] were present and were organized as already described in other tyramine-producing LAB. This operon was surrounded by genes showing the highest identities with mobile elements: a putative phage terminase and a putative transposase (downstream and upstream, respectively), suggesting that the tyramine-forming trait was acquired through horizontal gene transfer. Transcription analyses of the tdc gene cluster suggested that tyrS and nhaC are expressed as monocistronic genes while tdc would be part of a polycistronic mRNA together with tyrP. The presence of tyrosine in the culture medium induced the expression of all genes except for tyrS. A clear correlation was observed between initial tyrosine concentration and tyramine production combined with an increase in the final pH reached by the culture. Finally, cloning and expression of the tyrP gene in Lactococcus lactis demonstrated that its product catalyses the exchange of tyrosine and tyramine.


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