scholarly journals Mixing and transport by ciliary carpets: a numerical study

2014 ◽  
Vol 743 ◽  
pp. 124-140 ◽  
Author(s):  
Yang Ding ◽  
Janna C. Nawroth ◽  
Margaret J. McFall-Ngai ◽  
Eva Kanso

AbstractWe use a three-dimensional computational model to study the fluid transport and mixing due to the beating of an infinite array of cilia. In accord with recent experiments, we observe two distinct regions: a fluid transport region above the cilia and a fluid mixing region below the cilia tip. The metachronal wave due to phase differences between neighbouring cilia is known to enhance the fluid transport above the ciliary tip. In this work, we show that the metachronal wave also enhances the mixing rates in the sub-ciliary region, often simultaneously with the flow rate enhancement. Our results suggest that this simultaneous enhancement in transport and mixing is due to an enhancement in shear flow. As the flow above the cilia increases, the shear rate in the fluid increases and this shear enhances stretching, which is an essential ingredient for mixing. Estimates of the mixing time scale indicate that, compared to diffusion, the mixing due to the cilia beat may be significant and sometimes dominates chemical diffusion.

2011 ◽  
Vol 684 ◽  
pp. 137-162 ◽  
Author(s):  
Jeanette Hussong ◽  
Wim-Paul Breugem ◽  
Jerry Westerweel

AbstractIn this numerical study we investigate the flow induced by metachronal coordination between beating cilia arranged in a densely packed layer by means of a continuum model. The continuum approach allows us to treat the problem as two-dimensional as well as stationary, in a reference frame moving with the speed of the metachronal wave. The model is used as a computationally efficient design tool to investigate cilia-induced transport of a Newtonian fluid in a plane channel. Contrary to prior continuum models, the present approach accounts for spatial variations in the porosity along the metachronal wave and thus ensures conservation of mass within the cilia layer. Using porous-media theory the governing volume-averaged Navier–Stokes (VANS) equations are derived and closure formulations are given explicitly for the model. This makes it possible to investigate cilia-induced flow with a continuum model in both the viscous regime and the inertial regime. The results show that metachronal coordination can act as a transport mechanism in both regimes. Porosity variations appear to be the key mechanism for correct prediction of the fluid transport in the viscous flow regime. The reason is that spatial variations in the porosity break the symmetry of the drag distribution along the metachronal wave. A new insight that has been gained is that the fluid transport reverses, thus switches from plectic to antiplectic metachronism, for the same cilia beat cycle when the wavespeed is increased such that inertial effects occur. Based on a parameter study, the net transport in the channel is described by a power-law relation of the amplitude, length and speed of the metachronal wave. It is found that the wavelength has the strongest effect on the viscosity-dominated fluid transport.


2008 ◽  
Vol 15 (01n02) ◽  
pp. 111-116 ◽  
Author(s):  
JAE-SANG BAEK ◽  
JIN-HYO BOO ◽  
YOUN-JEA KIM

A numerical study is needed to gain insight into the growth mechanism and improve the reactor design or optimize the deposition condition in chemical vapor deposition (CVD). In this study, we have performed a numerical analysis of the deposition of gallium arsenide ( GaAs ) from trimethyl gallium (TMG) and arsine in a vertical CVD reactor. The effects of operating parameters, such as the rotation velocity of susceptor, inlet velocity, and inlet TMG fraction, are investigated and presented. The three-dimensional model which is used in this investigation includes complete coupling between the thermal-fluid transport and species transport with chemical reaction.


Author(s):  
C. Abegg ◽  
Graham de Vahl Davis ◽  
W.J. Hiller ◽  
St. Koch ◽  
Tomasz A. Kowalewski ◽  
...  

2012 ◽  
Vol 9 (1) ◽  
pp. 94-97
Author(s):  
Yu.A. Itkulova

In the present work creeping three-dimensional flows of a viscous liquid in a cylindrical tube and a channel of variable cross-section are studied. A qualitative triangulation of the surface of a cylindrical tube, a smoothed and experimental channel of a variable cross section is constructed. The problem is solved numerically using boundary element method in several modifications for a periodic and non-periodic flows. The obtained numerical results are compared with the analytical solution for the Poiseuille flow.


2021 ◽  
Vol 11 (8) ◽  
pp. 3404
Author(s):  
Majid Hejazian ◽  
Eugeniu Balaur ◽  
Brian Abbey

Microfluidic devices which integrate both rapid mixing and liquid jetting for sample delivery are an emerging solution for studying molecular dynamics via X-ray diffraction. Here we use finite element modelling to investigate the efficiency and time-resolution achievable using microfluidic mixers within the parameter range required for producing stable liquid jets. Three-dimensional simulations, validated by experimental data, are used to determine the velocity and concentration distribution within these devices. The results show that by adopting a serpentine geometry, it is possible to induce chaotic mixing, which effectively reduces the time required to achieve a homogeneous mixture for sample delivery. Further, we investigate the effect of flow rate and the mixer microchannel size on the mixing efficiency and minimum time required for complete mixing of the two solutions whilst maintaining a stable jet. In general, we find that the smaller the cross-sectional area of the mixer microchannel, the shorter the time needed to achieve homogeneous mixing for a given flow rate. The results of these simulations will form the basis for optimised designs enabling the study of molecular dynamics occurring on millisecond timescales using integrated mix-and-inject microfluidic devices.


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