scholarly journals Paleocommunity composition, relative abundance, and new camerate crinoids from the Brechin Lagerstätte (Upper Ordovician)

2020 ◽  
Vol 94 (6) ◽  
pp. 1103-1123 ◽  
Author(s):  
Selina R. Cole ◽  
David F. Wright ◽  
William I. Ausich ◽  
Joseph M. Koniecki
Keyword(s):  
New Species ◽  
Relative Abundance ◽  
Taxonomic Composition ◽  
Nominal Species ◽  
Abundance Distribution ◽  
Upper Ordovician ◽  
Ecological Complexity ◽  
Multiple Resource ◽  
Total Diversity ◽  
Ways Of Life

AbstractThe Brechin Lagerstätte of southern Ontario contains an exceptionally diverse and well-preserved Late Ordovician (Katian) crinoid fauna. We describe four genera and eight species of camerate crinoids from the Brechin Lagerstätte, including six new species. Consequently, the total diversity of the fauna now stands at 27 genera and 39 nominal species, thereby making it the most taxonomically diverse Ordovician crinoid fauna known. Taxa described include the diplobathrid Pararchaeocrinus kiddi new species and the monobathrids Glyptocrinus ramulosus Billings, 1856, Periglyptocrinus priscus (Billings, 1857a), Periglyptocrinus astricus new species, Periglyptocrinus kevinbretti new species, Periglyptocrinus mcdonaldi new species, Periglyptocrinus silvosus new species, and Abludoglyptocrinus steinheimerae new species. We summarize the taxonomic composition, diversity, and abundance distribution of all known crinoids from the Brechin Lagerstätte to better characterize the paleoecological structure and complexity of the community. We establish that the fauna is dominated by the subclass Pentacrinoidea, both in terms of abundance and species richness. In addition, we analyze species-level abundance data using Relative Abundance Distribution (RAD) models to evaluate the ecological complexity of the paleocommunity. We found that community structure of the Brechin Lagerstätte is best explained by an ecologically ‘complex’ RAD model, which suggests that species partitioned niches along multiple resource axes and/or the presence of multiple ecological ways of life. These results indicate that the Brechin Lagerstätte is significant not only for being the most taxonomically diverse Katian crinoid assemblage, but also for being an early ecologically complex fauna that developed in the wake of the Great Ordovician Biodiversification Event.UUID: http://zoobank.org/f86582ed-5db6-469E-befe-34b801f9a113

The centipede genus Otostigmus Porat in Brazil: Description of three new species from the Atlantic Forest; a summary and an identification key to the Brazilian species of this genus (Chilopoda, Scolopendromorpha, Scolopendridae, Otostigminae)

Zootaxa ◽  
2012 ◽  
Vol 3280 (1) ◽  
pp. 1 ◽  
Author(s):  
AMAZONAS CHAGAS-JÚNIOR
Keyword(s):  
New Species ◽  
Atlantic Forest ◽  
The State ◽  
Junior Synonym ◽  
Identification Key ◽  
Nominal Species ◽  
Brazilian Atlantic Forest ◽  
Three New Species ◽  
First Time ◽  
New Distribution

Three new species of Otostigmus Porat, 1876 from Brazilian Atlantic Forest are described. Otostigmus beckeri sp. n. andO. lanceolatus sp. n. are described from the state of Bahia and O. giupponii sp. n. from the state of Espírito Santo. InBrazil, the otostigmine scolopendrid genus Otostigmus comprises 22 species. A summary of Brazilian Otostigmus speciesis presented with new distribution records, taxonomic remarks when appropriate and an identification key. Otostigmus sul-catus Meinert, 1886 is recorded for the first time from Brazil; the Andean Otostigmus silvestrii Kraepelin 1903, previouslyrecorded from Brazil, is here considered not to be present in this country. Eight nominal species are regarded here as newsynonyms. Five of them—Otostigmus pradoi Bücherl, 1939, O. longistigma Bücherl, 1939, O. longipes Bücherl, 1939,O. langei Bücherl, 1946 and O. dentifusus Bücherl, 1946—are based on females of O. tibialis Brölemann, 1902. O. latipesBücherl, 1954 is conspecific with and is considered a junior synonym of O. sulcatus Meinert, 1886; O. limbatus diminutusBücherl, 1946 is a junior synonym of O. limbatus Meinert, 1886 and O. fossulatus Attems, 1928 is a junior synonym of O. goeldii Brölemann, 1898. A lectotype is designated for O. goeldii.

A taxonomic revision of the genus Mesophleps Hübner, 1825 (Lepidoptera: Gelechiidae)

Zootaxa ◽  
2012 ◽  
Vol 3373 (1) ◽  
pp. 1 ◽  
Author(s):  
HOUHUN LI ◽  
KLAUS SATTLER
Keyword(s):  
New Species ◽  
Taxonomic Revision ◽  
Species Group ◽  
Type Material ◽  
Nominal Species ◽  
New Combinations ◽  
Old World

The genus Mesophleps Hübner (Lepidoptera: Gelechiidae) is revised; 54 available names (including one unjustifiedemendation), one junior primary homonym and one unavailable name were considered; type material of 44 previouslydescribed nominal species was examined. Nine new species are described: M. acutunca sp. nov., M. bifidella sp. nov., M.unguella sp. nov., M. gigantella sp. nov., M. coffeae sp. nov., M. parvella sp. nov., M. aspina sp. nov., M. truncatella sp.nov. and M. undulatella sp. nov. Two possibly new species are discussed but not formally named for lack of material.Twenty-five new combinations are introduced: M. safranella (Legrand, 1965) comb. nov., M. epichorda (Turner, 1919)comb. nov., M. tabellata (Meyrick, 1913) comb. nov., M. crocina (Meyrick, 1904) comb. nov., M. ochracella (Turati,1926) comb. nov., M. geodes (Meyrick, 1929) comb. nov., M. catericta (Meyrick, 1927) comb. nov., M. tephrastis(Meyrick, 1904) comb. nov., M. cycnobathra (Lower, 1898) comb. nov., M. tetrachroa (Lower, 1898) comb. nov., M.ochroloma (Lower, 1901) comb. nov., M. trichombra (Lower, 1898) comb. nov., M. mylicotis (Meyrick, 1904) comb. nov.,M. macrosemus (Lower, 1900) comb. nov., M. apentheta (Turner, 1919) comb. nov., M. meliphanes (Lower, 1894) comb.nov., M. chloranthes (Lower, 1900) comb. nov., M. centrothetis (Meyrick, 1904) comb. nov., M. chloristis (Meyrick,1904) comb. nov., M. argonota (Lower, 1901) comb. nov., Megacraspedus arnaldi (Turati & Krüger, 1936) comb. nov.,Aponoea cinerellus (Turati, 1930) comb. nov., Pycnobathra acromelas (Turner, 1919) comb. nov., Sarotorna mesoleuca(Lower, 1900) comb. nov., S. dentata Meyrick, 1904, comb. nov. One species, Nothris mesophracta Turner, 1919, isremoved from Mesophleps but no current genus is available. Fourteen new synonymies (one genus, 13 species-group taxa)are established: Bucolarcha Meyrick, 1929, syn. nov. of Mesophleps Hübner, [1825]; Stiphrostola longinqua Meyrick,1923, syn. nov. and Brachyacma trychota Meyrick, 1929, syn. nov. of M. ioloncha (Meyrick, 1905); Lipatia crotalariellaBusck, 1910, syn. nov. of M. adustipennis (Walsingham, 1897); Brachyacma epichorda Turner, 1919, syn. nov. of M.epiochra (Meyrick, 1886); Mesophleps pudicellus var. apicellus Caradja, 1920, syn. nov. and Mesophleps silacellus subsp.calaritanus Amsel, 1939, syn. nov. of M. silacella (Hübner, 1796); Mesophleps lala Agenjo, [1961], syn. nov. of M.corsicella (Herrich-Schäffer, 1856); Crossobela barysphena Meyrick, 1923, syn. nov. of M. trinotella Herrich-Schäffer,1856; Mesophleps orientella Nel & Nel, 2003, syn. n. and Mesophleps gallicella Varenne & Nel, 2011, syn. nov. of M.ochracella (Turati, 1926); Nothris centrothetis Meyrick, 1904, syn. nov. and Nothris chloristis Meyrick, 1904, syn. nov.of M. chloranthes (Lower, 1900); Mesophleps cinerellus Turati, 1930, syn. nov. of Aponoea obtusipalpis Walsingham,1905. One genus and one species are recalled from synonymy: Pycnobathra Lower, 1901, gen. rev., and M. ioloncha(Meyrick, 1905) sp. rev. Lectotypes are designated, in accordance with the Code, article 74.7.3, for 14 species: Gelechiapalpigera Walsingham, 1891; Paraspistes ioloncha Meyrick, 1905; Lathontogenus adustipennis Walsingham, 1897;Brachyacma epichorda Turner, 1919; Nothris crocina Meyrick, 1904; Nothris ochracella Turati, 1926; Nothris tephrastisMeyrick, 1904; Ypsolophus ochroloma Lower, 1901; Ypsolophus macrosemus Lower, 1900; Nothris centrothetis Meyrick,1904; Nothris chloristis Meyrick, 1904; Ypsolophus argonota Lower, 1901; Mesophleps arnaldi Turati & Krüger, 1936,and Mesophleps cinerellus Turati, 1930. Mesophleps is a widely distributed Old World genus, except for one New Worldspecies, with seed-feeding larvae on Cupressaceae, Cistaceae, Cruciferae (Brassicaceae), Leguminosae (Fabaceae), Rubiaceae and doubtfully Dipterocarpaceae.

The revised Permian genus Dagmarita Reitlinger, 1965 (Dagmaritinae, Foraminifera) and its phylogenetic relationships

2019 ◽  
Vol 94 (2) ◽  
pp. 202-216
Author(s):  
Valerio Gennari ◽  
Roberto Rettori
Keyword(s):  
New Species ◽  
Thin Section ◽  
Phylogenetic Relationships ◽  
Morphological Character ◽  
Taxonomic Composition ◽  
3D Reconstructions ◽  
Nw Iran ◽  
Smaller Foraminifers ◽  
Worldwide Distribution ◽  
First Time

AbstractAmong Permian smaller foraminifers, the genus Dagmarita is one of the most studied due to its worldwide distribution. The detailed study of the Zal (NW Iran) and Abadeh (Central Iran) stratigraphic sections led to redescription of the genus Dagmarita and its taxonomic composition. In Dagmarita, a peculiar generic morphological character, represented by a secondary valvular projection, has been detected for the first time among globivalvulinid foraminifers. The phylogeny of Dagmarita, and in particular its ancestor Sengoerina, is discussed and the new species, D. ghorbanii n. sp. and D. zalensis n. sp., are introduced. Analogies and differences among all the species belonging to Dagmarita are highlighted and morphological features of the new taxa are shown in 3D reconstructions, useful for understanding differently oriented sections of the specimens in thin section.UUID: http://zoobank.org/3d8eb14c-7757-4cbd-877c-4bacd2d156da

A revision of the gobiid fish genus Pseudogobius (Teleostei, Gobiidae, Tridentigerinae), with description of seven new species from Australia and South-east Asia

Zootaxa ◽  
2021 ◽  
Vol 4961 (1) ◽  
pp. 1-85
Author(s):  
HELEN K. LARSON ◽  
MICHAEL P. HAMMER
Keyword(s):  
New Species ◽  
Feedback Loop ◽  
Valid Species ◽  
Nominal Species ◽  
Type Specimens ◽  
Gobiid Fish ◽  
West Pacific ◽  
Close Proximity ◽  
Tropical Areas ◽  
Initial Focus

The tridentigerine genus Pseudogobius is widespread, from temperate to tropical areas of the Indo-west Pacific. A morphological review of the genus was carried out, with the initial focus on South-east Asian and Australian species. There are about 21 nominal species in the genus; however, the type specimens for some nominal species are missing. Our work recognises 15 valid species so far, including seven new species, which are described herein: P. aquilonius n. sp., P. cinctus n. sp., P. eos n. sp., P. hoesei n. sp., P. jeffi n. sp., P. rhizophora n. sp. and P. verticalis n. sp. We also conclude that P. poicilosoma (Bleeker, 1849) is the senior synonym of P. javanicus (Bleeker, 1856). Pseudogobius poicilosoma, P. gastrospilos (Bleeker, 1853) and P. javanicus are accepted here as conspecific, although the types are in poor condition (note that all three names were given to specimens collected within close proximity to each other in coastal Java, Indonesia). A key to valid species is presented. The revision benefited from an adaptive feedback loop with companion genetic analyses, with the most comprehensive data available for the Australian region. Broader preliminary genetic data suggest the potential for recognition of additional cryptic species, with the current study providing a platform for future systematic work. Pseudogobius are a prominent part of estuarine biodiversity in the Indo-west Pacific, and this study helps to highlight the need to better understand the taxonomy and conservation requirements of cryptobenthic fishes. 

Avitograptus species (Graptolithina) from the Hirnantian (uppermost Ordovician) Anji Biota of South China and the evolution of Akidograptus and Parakidograptus

2020 ◽  
Vol 94 (5) ◽  
pp. 955-965 ◽  
Author(s):  
Lucy A. Muir ◽  
Yuandong Zhang ◽  
Joseph P. Botting ◽  
Xuan Ma
Keyword(s):  
New Species ◽  
South China ◽  
Zhejiang Province ◽  
The Other ◽  
New Combination ◽  
Upper Ordovician ◽  
Additional Species ◽  
Evolutionary Changes

AbstractThe latest Ordovician to earliest Silurian graptolite Avitograptus avitus is important in the biostratigraphy of the Ordovician–Silurian boundary interval. Two additional species of Avitograptus are described from the sponge-dominated Anji Biota of the Upper Ordovician Wenchang Formation (Metabolograptus persculptus Biozone) of Zhejiang Province, South China. One species, Avitograptus akidomorphus new species, is new; the other, Avitograptus acanthocystus new combination, which was previously placed in Climacograptus, is herein assigned to Avitograptus. The former species may represent the ancestral akidograptid because it is identical in thecal form to Akidograptus, but differs in the development of the proximal end. The evolutionary changes from Avitograptus avitus to Akidograptus and Parakidograptus involved distal movement of the origins of th11 and th12, thecal elongation, and greater outward inclination of the thecal walls.UUID: http://zoobank.org/81c433a0-9069-48d2-ae72-1267400cbf77.

Philometra barbata n. sp. (Nematoda: Philometridae) from the red mullet Mullus barbatus (Perciformes, Mullidae) off Tunisia

2018 ◽  
Vol 63 (4) ◽  
pp. 766-771 ◽  
Author(s):  
Nessrine Ghanmi ◽  
David González-Solís ◽  
Lamia Gargouri
Keyword(s):  
New Species ◽  
Mediterranean Sea ◽  
Body Length ◽  
Nematode Species ◽  
The Body ◽  
Nominal Species ◽  
Congeneric Species ◽  
Red Mullet ◽  
Mullus Barbatus ◽  
The Family

Abstract Helminthological examinations of the red mullet Mullus barbatus (Linnaeus) (Mullidae) from the Gulf of Hammamet, off Tunisia, revealed the presence of one undescribed gonad-infecting nematode species, Philometra barbata n. sp. (Philometridae). The new species as other congeneric species is mainly characterized by the shape of the caudal mound, the distribution of the caudal papillae and the shape of the gubernaculum with the presence of a dorsal protuberance consisting of two dorsolateral lamellar parts separated from each other by a smooth median field in the male. The new species differs from its gonadinfecting congeners in the body length of male, the length of spicules and gubernaculum. This is the second nominal species of Philometra reported from fishes of the family Mullidae and the 14th from the Mediterranean Sea.

Taxonomy of the South American genus Pachypops Gill 1861 (Teleostei: Perciformes: Sciaenidae), with the description of a new species

Zootaxa ◽  
2002 ◽  
Vol 26 (1) ◽  
pp. 1 ◽  
Author(s):  
LILIAN CASATTI
Keyword(s):  
New Species ◽  
River Basins ◽  
Junior Synonym ◽  
Valid Species ◽  
Nominal Species ◽  
South American ◽  
The South ◽  
Haemal Spine ◽  
A New Species ◽  
Fin Spines

Pachypops is a South American freshwater sciaenid genus characterized by having two anal-fin spines, three mental barbels, an inferior mouth, a swimbladder with a pair of short appendages anteriorly and a pair of longer appendages projected posteriorly, and the haemal spine of the first caudal distinctly expanded. Three valid Pachypops species are recognized herein. Of the six nominal species previously assigned to Pachypops, two are herein recognized as valid (Perca fourcroi and Micropogon trifilis), two are assigned to other sciaenid genera (Pachypops adspersus and Pachypops cevegei) and two are considered junior synonyms (Corvina biloba and Pachypops camposi). A seventh nominal species, Pachyurus nattereri, formerly considered a valid species of Pachyurus, is determined to be a junior synonym of Pachypops fourcroi, and lectotype and paralectotypes are designated for it. Pachypops fourcroi occurs in the Orinoco, Amazonas, Essequibo, Corantijn, and Approuague River basins, and Pachypops trifilis in rivers of Guyana and middle and lower reaches of the Rio Amazonas basin. A third valid species, Pachypops pigmaeus n. sp., is herein described from tributaries of the Rio Amazonas, Brazil.

scholarly journals StrainPro – a highly accurate Metagenomic strain-level profiling tool

2019 ◽  
Author(s):  
Hsin-Nan Lin ◽  
Yaw-Ling Lin ◽  
Wen-Lian Hsu
Keyword(s):  
Microbial Community ◽  
Relative Abundance ◽  
Taxonomic Diversity ◽  
Evaluation Study ◽  
Taxonomic Composition ◽  
Strain Level ◽  
Metagenomic Analysis ◽  
Reference Database ◽  
Analysis Tool ◽  
Analysis Tools

ABSTRACTCharacterizing the taxonomic diversity of a microbial community is very important to understand the roles of microorganisms. Next generation sequencing (NGS) provides great potential for investigation of a microbial community and leads to Metagenomic studies. NGS generates DNA fragment sequences directly from microorganism samples, and it requires analysis tools to identify microbial species (or taxonomic composition) and estimate their relative abundance in the studied community. However, only a few tools could achieve strain-level identification and most tools estimate the microbial abundances simply according to the read counts. An evaluation study on metagenomic analysis tools concludes that the predicted abundance differed significantly from the true abundance. In this study, we present StrainPro, a novel metagenomic analysis tool which is highly accurate both at characterizing microorganisms at strain-level and estimating their relative abundances. A unique feature of StrainPro is it identifies representative sequence segments from reference genomes. We generate three simulated datasets using known strain sequences and another three simulated datasets using unknown strain sequences. We compare the performance of StrainPro with seven existing tools. The results show that StrainPro not only identifies metagenomes with high precision and recall, but it is also highly robust even when the metagenomes are not included in the reference database. Moreover, StrainPro estimates the relative abundance with high accuracy. We demonstrate that there is a strong positive linear relationship between observed and predicted abundances.

Revision of the genus Rhoptromeris Förster, 1869 with reference to north-western European species

1978 ◽  
Vol 9 (1) ◽  
pp. 47-62 ◽  
Author(s):  
Göran Nordlander
Keyword(s):  
New Species ◽  
Type Species ◽  
Type Material ◽  
Nominal Species ◽  
European Species ◽  
Western European ◽  
North Western ◽  
A New Species

AbstractThe type material of most European nominal species previously placed in Rhoptromeris and of some other species is studied. Notes are given on the type material, 10 lectotypes are designated and the identity of the species is discussed. Three valid Rhoptromeris species are found: R. heptoma (Hartig) [type species], R. villosa (Hartig) and R. rufiventris (Giraud) n.comb. The latter is the type species of Hexamerocera Kieffer which is synonymized with Rhoptromeris. The genus Rhoptromeris is described and compared with related genera. The three species found to be valid are figured and redescribed, and also a new species, R. nigriventris, is described from Sweden. R. heptoma is an important parasitoid of Oscinella frit (L.) (Dipt.: Chloropidae).

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