A molecular phylogeny of the genus Echinococcus

Parasitology ◽  
1995 ◽  
Vol 110 (3) ◽  
pp. 317-328 ◽  
Author(s):  
J. Bowles ◽  
D. Blair ◽  
D. P. McManus
Keyword(s):  
Taxonomic Revision ◽  
Valid Species ◽  
Sequence Variant ◽  
Data Sets ◽  
Its1 Sequence ◽  
Strain Group ◽  
Mitochondrial Coi ◽  
Bovine Strain ◽  
Nucleotide Data ◽  
Ambiguous Data

SUMMARYThree nucleotide data sets, two mitochondrial (COI and ND1) and one nuclear (ribosomal ITS1), have been investigated in order to resolve relationships among species and strains of the genus Echinococcus. The data have some unusual properties in that mitochondrial heteroplasmy was detected in one strain of E. granulosus, and more than one class of ITS1 sequence variant can occur in a single isolate. The data failed to support the hypothesis that E. granulosus, as it is currently viewed, is a single valid species. Rather, the strains of E. granulosus seem to comprise at least three evolutionarily diverse groups, the sheep strain group, bovine strain group and horse strain group. Molecular distances between them are comparable to, or greater than, molecular evolutionary distances observed between recognized species. The affinities of the cervid strain of E. granulosus are unclear because of ambiguous data, but this strain does not appear to be ancestral to others. E. multilocularis may not be distinct from E. granulosus. However, the remaining two species, E. vogeli and E. oligarthrus appear distinct and rather distant from the first two. Based on the results presented here, taxonomic revision of the genus is clearly warranted.

scholarly journals Taxonomic revision of the genus Copelatus of Madagascar (Coleoptera, Dytiscidae, Copelatinae): the non- erichsonii group species

ZooKeys ◽  
2019 ◽  
Vol 869 ◽  
pp. 19-90 ◽  
Author(s):  
Tolotra Ranarilalatiana ◽  
Lala Harivelo Raveloson Ravaomanarivo ◽  
Johannes Bergsten
Keyword(s):  
Taxonomic Revision ◽  
Species Group ◽  
Junior Synonym ◽  
Valid Species ◽  
Mitochondrial Coi ◽  
Taxonomic Approach ◽  
First Time ◽  
Group Species

The genus Copelatus Erichson, 1832 (Coleoptera, Dytiscidae, Copelatinae) of Madagascar is revised in two parts. This review is restricted to the Copelatus species that have fewer than ten elytral + one submarginal stria, including all species except those of the erichsonii species group. Both morphological and molecular (mitochondrial COI) data are used in an integrative taxonomic approach. Thirteen species are recognised, of which five are described as new: Copelatus ankaratrasp. nov., Copelatus kelysp. nov., Copelatus pseudostriatussp. nov., Copelatus safiotrasp. nov. and Copelatus vokokasp. nov.Copelatus unguicularis Régimbart, 1903 and Copelatus apicalis Fairmaire, 1898 are both transferred to the genus Madaglymbus Shaverdo & Balke, 2008 (comb. nov.). Copelatus mimetesGuignot 1957 is a junior synonym of the widespread Afrotropical–Arabian Copelatus pulchellus (Klug, 1834) (syn. nov.). Copelatus marginipennis (Laporte, 1835) is reinstated (stat. nov.) as a valid species with Copelatus aldabricus Balfour-Browne, 1950 and Copelatus aldabricus var. simplex Guignot, 1952 as junior synonyms (syn. nov.). We designate lectotypes for Colymbetes marginipennis Laporte, 1835 and Copelatus obtusus Boheman, 1848. Copelatus peridinus Guignot, 1955 is recorded for Madagascar for the first time and Copelatus nodieri Régimbart, 1895 is rejected as a species present in Madagascar.

scholarly journals Review of the Nassarius pauperus (Gould, 1850) complex (Nassariidae): Part 3, reinstatement of the genus Reticunassa, with the description of six new species

2017 ◽  
Author(s):  
Lee Ann Galindo ◽  
Hugo H. Kool ◽  
Henk Dekker
Keyword(s):  
New Species ◽  
Species Delimitation ◽  
Type Species ◽  
Taxonomic Revision ◽  
Shell Morphology ◽  
Valid Species ◽  
Reciprocal Monophyly ◽  
Complex Species ◽  
Mitochondrial Coi ◽  
Molecular Characters

In this review (third part), several species within the Nassarius pauperus complex from the eastern Indian Ocean and western Pacific are treated, including a revised concept of Nassa paupera Gould, 1850, type species of the genus Reticunassa Iredale, 1936. In the most recent taxonomic revision, several species had been synonymized with Nassarius pauperus (Gould, 1850), despite distinctive differences among these species in shell morphology. We sequenced a fragment of the mitochondrial COI and the nuclear 28S genes of all available Nassarius pauperus complex species. Automatic barcode gap discovery and reciprocal monophyly were applied to propose species delimitation hypotheses and to support a new concept of the genus. Using morphological and molecular characters, Reticunassa is elevated to full genus rank. Six new species are described: Reticunassa visayaensis sp. nov., R. poppeorum sp. nov., R. annabolteae sp. nov., R. goliath sp. nov., R. intrudens sp. nov. and R. thailandensis sp. nov., while R. tringa (Souverbie, 1864) is recognized as a valid species.

scholarly journals Empria longicornis species group: taxonomic revision with notes on phylogeny and ecology (Hymenoptera, Tenthredinidae)

Zootaxa ◽  
2011 ◽  
Vol 2756 (1) ◽  
pp. 1 ◽  
Author(s):  
MARKO PROUS ◽  
MIKK HEIDEMAA ◽  
VILLU SOON
Keyword(s):  
Mitochondrial Dna ◽  
Dna Sequences ◽  
Host Plants ◽  
Taxonomic Revision ◽  
Species Group ◽  
Valid Species ◽  
Mitochondrial Coi ◽  
Species Phylogeny ◽  
Species Circumscription ◽  
Its1 And Its2

The Empria longicornis species group (Hymenoptera, Tenthredinidae) is revised. Empria japonica Heidemaa & Prous, sp. nov. is described from Japan. The lectotypes of Empria gussakovskii Dovnar-Zapolskij, 1929, E. konowi Dovnar-Zapolskij, 1929, Poecilosoma longicornis Thomson, 1871, P. mongolica Konow, 1895, and P. tridens Konow, 1896 are designated. Empria konowi Dovnar-Zapolskij, 1929 (syn. nov.) and E. gussakovskii Dovnar-Zapolskij, 1929 (syn. nov.) are synonymized with E. tridens (Konow, 1896), and Empria waldstaetterense Liston, 1980 (syn. nov.) with E. alector Benson, 1938. Empria alpina Benson, 1938 and E. minuta Lindqvist, 1968, earlier misidentified as E. gussakovskii, are treated as valid species. Nine species are confirmed to belong in the longicornis-group: E. alector, E. alpina, E. basalis, E. japonica, E. loktini, E. longicornis, E. minuta, E. mongolica, and E. tridens. Distributional data of the species and a key to the imagines are provided. Ex ovo rearings of the four most common and often misidentified species in the group (E. alector, E. basalis, E. longicornis, and E. tridens) were carried out to verify their host plants and male conspecifics. External morphology, morphometrics (geometric and traditional), and DNA sequences (mitochondrial COI and nuclear ITS1 and ITS2) are used to delimit species within the group and to assess their phylogenetic relationships. Mitochondrial DNA sequences analyzed are mostly regarded as unsuitable for species circumscription, DNA barcoding and for reconstructing species phylogeny within the group. In this regard, analyses of the ITS sequences yielded more concordant results.

Corrigendum to: Cladistic analysis and revision of Piestus Gravenhorst with remarks on related genera (Coleoptera : Staphylinidae : Piestinae)

2013 ◽  
Vol 27 (1) ◽  
pp. 129
Author(s):  
Edilson Caron ◽  
Cibele S. Ribeiro-Costa ◽  
Alfred F. Newton
Keyword(s):  
Cladistic Analysis ◽  
Taxonomic Revision ◽  
Sister Group ◽  
Morphological Characters ◽  
Valid Species ◽  
Phylogenetic Position ◽  
Neotropical Forests ◽  
Rove Beetles ◽  
New Synonyms ◽  
Branch Support

Rove beetles of the genus Piestus Gravenhorst, 1806 are commonly captured under the bark of or inside decaying logs from Neotropical forests. Piestus belongs to the subfamily Piestinae, historically an ill-defined dumping-ground for Staphylinidae defined by plesiomorphic characters, but which has gradually been restricted in concept and currently includes only six additional extant genera worldwide. Piestinae in this restricted sense has been considered a probably monophyletic subfamily, but its status and phylogenetic position, as a possible sister-group of Osoriinae within the recently proposed Oxyteline group of staphylinid subfamilies, are uncertain and need confirmation. The main aim of the present study was to provide a morphological cladistic analysis and complete taxonomic revision of Piestus, which, as the type and most speciose genus of Piestinae, is critical for future phylogenetic studies involving the subfamily. In our study, the monophyly of Piestus is established and phylogenetic relationships among its species are proposed based on 70 adult morphological characters. Piestus is supported by 11 synapomorphies and high branch support. All species of Piestus are revised and the genus is redefined. The genus contains 43 species, including 13 species described here for the first time. The previously proposed subgenera Antropiestus Bernhauer, 1917, Eccoptopiestus Scheerpeltz, 1952, Elytropiestus Scheerpeltz, 1952, Lissopiestus Scheerpeltz, 1952, Piestus s. str., Trachypiestus Scheerpeltz, 1952 and Zirophorus Dalman, 1821 have not been confirmed, as they were found to be poly- or paraphyletic, or are here removed from Piestus, and therefore subgenera are not used. The main taxonomic changes are as follows. Lissopiestus, syn. nov. is proposed as new synonym of Eleusis Laporte, 1835 and its species, E. interrupta (Erichson, 1840), comb. rest., is transferred again to that genus. Antropiestus, syn. nov. and Eccoptopiestus, syn. nov. are proposed as new synonyms of Hypotelus Erichson, 1839 and their species, H. laevis (Solsky, 1872), comb. nov. and H. andinus (Bernhauer, 1917), comb. nov., are transferred to Hypotelus. Fourteen new synonymies are proposed (valid species listed first): P. lacordairei Laporte, 1835 = Z. furcatus Sharp, 1887, syn. nov.; P. capricornis Laporte, 1835 = P. frontalis Sharp, 1876, syn. nov.; P. pennicornis Fauvel, 1864 = P. plagiatus Fauvel, 1864, syn. nov.; P. rectus Sharp, 1876, syn. nov.; P. pygialis Fauvel, 1902, syn. nov.; P. surinamensis Bernhauer, 1928, syn. nov.; P. minutus Erichson, 1840 = P. nigrator Fauvel, 1902, syn. nov.; P. sulcatus Gravenhorst, 1806 = P. sanctaecatharinae Bernhauer, 1906, syn. nov.; P. condei Wendeler, 1955, syn. nov.; P. gounellei Fauvel, 1902 = P. wasmanni Fauvel, 1902, syn. nov.; P. mexicanus Laporte, 1835 = P. alternans Sharp, 1887, syn. nov.; P. aper Sharp, 1876 = P. schadei Scheerpeltz, 1952, syn. nov.; P. angularis Fauvel, 1864 = P. crassicornis Sharp, 1887, syn. nov.; H. andinus (Bernhauer, 1917) = P. strigipennis Bernhauer, 1921, syn. nov. One species is revalidated: P. fronticornis (Dalman, 1821), stat. rev., and one synonym is restored: P. penicillatus (Dalman, 1821) = P. erythropus Erichson, 1840, syn. rest. Neotypes are designated for P. lacordairei Laporte, 1835 and Oxytelus bicornis Olivier, 1811, and lectotypes are designated for P. puncticollis Fauvel, 1902, P. capricornis variety muticus Fauvel, 1902, P. zischkai Scheerpeltz, 1951, P. pennicornis Fauvel, 1864, P. plagiatus Fauvel, 1864, P. pygmaeus Laporte, 1835, P. niger Fauvel 1864, P. minutus Erichson, 1840, P. nigratror Fauvel, 1902, P. sulcatus Gravenhorst, 1806, P. sanctaecatharinae Bernhauer, 1906, P. sulcipennis Scheerpeltz, 1952, P. aper Sharp, 1876, P. schadei Scheerpeltz, 1952 and P. andinus Bernhauer, 1917.

scholarly journals Toward a comprehensive taxonomic revision of the “hirculus” group of American Onthophagus Latreille, 1802 (Coleoptera, Scarabaeidae, Scarabaeinae)

2018 ◽  
Author(s):  
Michele Rossini ◽  
Fernando Z. Vaz-de-Mello ◽  
Mario Zunino
Keyword(s):  
Geographic Distribution ◽  
General Scheme ◽  
Taxonomic Revision ◽  
Junior Synonym ◽  
Valid Species ◽  
Species Complexes ◽  
Scarab Beetles

The taxonomy of the American Onthophagus Latreille, 1802 included in the “hirculus” group is revised, and a study of their morphology allows for the delineation of five species-complexes. Herein, we provide a diagnosis of the “hirculus” group, an illustrated key to the complexes, along with a descriptive overview of their taxonomy and geographic distribution. Onthophagus hirculus Mannerheim, 1829 is considered to be a junior synonym of O. hircus Billberg, 1815, which is here demonstrated to be a valid species name. Thus, the “hirculus” group is here renamed the “hircus” group. Furthermore, a general scheme of the genital organs of American Onthophagus is provided, including names of different anatomical parts and a brief discussion on the need for nomenclatural stability for the genitalia of scarab beetles.

scholarly journals Resurrection of the Butterfly-winged Comber, Serranus papilionaceus Valenciennes, 1832 (Teleostei, Serranidae) and its phylogenetic position within genus Serranus

ZooKeys ◽  
2021 ◽  
Vol 1017 ◽  
pp. 111-126
Author(s):  
Adriana Vella ◽  
Noel Vella ◽  
Carolina Acosta-Díaz
Keyword(s):  
Conservation Status ◽  
Valid Species ◽  
Phylogenetic Position ◽  
Mitochondrial Coi ◽  
Interspecific Divergence ◽  
Population Conservation ◽  
Status Assessment ◽  
Morphological Differences ◽  
Species Specific ◽  
High Level

The family Serranidae is represented by 92 genera and 579 valid species, with the genus Serranus Cuvier, 1816, containing 30 species. In this study, specimens of Butterfly-winged Comber, Serranus papilionaceus Valenciennes, 1832, were collected from the Canary Islands and compared morphologically and genetically to Painted Comber, Serranus scriba (Linnaeus, 1758), from the Mediterranean Sea. Morphological differences, especially in the colour banding pattern, were corroborated by genetic differences in mitochondrial (COI and ND2) and nuclear (Rhod and PTR) markers. The mitochondrial DNA markers revealed a high level of divergence and no shared haplotypes between the two species (interspecific divergence: COI 4.31%; ND2 8.68%), and a phylogenetic analysis showed that these two species are closely related sister species sharing common ancestry. This study is therefore offering to resurrect S. papilionaceus Valenciennes, 1832 as a valid species increasing the number of eastern Atlantic Serranus species to 11. This should direct new species-specific research, including its population conservation status assessment across its distribution.

scholarly journals A revision of the genus Psammogorgia Verrill, 1868 (Cnidaria, Anthozoa, Octocorallia) in the tropical eastern Pacific Ocean

ZooKeys ◽  
2020 ◽  
Vol 961 ◽  
pp. 1-30
Author(s):  
Odalisca Breedy ◽  
Hector M. Guzman
Keyword(s):  
Taxonomic Status ◽  
Taxonomic Revision ◽  
Eastern Pacific ◽  
New Combination ◽  
Valid Species ◽  
Shallow Waters ◽  
Eastern Pacific Ocean ◽  
Tropical Eastern Pacific ◽  
Character Tables ◽  
Two New Species

The species of the genus Psammogorgia Verrill, 1868 from the shallow waters of the tropical eastern Pacific were mainly described from 1846 to 1870. Very few contributions were published subsequently. Recently, the genus was revisited with the addition of two new species. However, a comprehensive generic study is still missing for the eastern Pacific. Psammogorgia is characterised by having axes cores without mineralisation, mainly coarse irregular spindles and thorny, leafy or tuberculate clubs coenenchymal sclerites and the anthocodial armature with distinct collaret and points arrangements. Herein a taxonomic revision of the genus is presented based on type material which was morphologically analysed and illustrated using optical and scanning electron microscopy. Comparative character tables are provided for comparison among species in the genus, along with a taxonomic key. Moreover, the taxonomic status of each species was analysed. The genus Psammogorgia comprises six valid species and two varieties, and three lectotypes and a new combination are proposed to establish the taxonomic status of these species.

scholarly journals Taxonomic revision and phylogenetic relationships of Dasyloricaria Isbrücker & Nijssen, 1979 (Siluriformes: Loricariidae), with description of a new species

2016 ◽  
Vol 14 (1) ◽  
Author(s):  
Alejandro Londoño-Burbano ◽  
Roberto E. Reis
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Phylogenetic Relationships ◽  
Taxonomic Revision ◽  
Sister Group ◽  
Valid Species ◽  
Maracaibo Basin ◽  
New Synonyms ◽  
Branchial Arches ◽  
A New Species

ABSTRACT A taxonomic revision and phylogenetic analysis were completed for Dasyloricaria . The genus includes three valid species: D . filamentosa and D . latiura previously included in the genus, and a new species described herein. Dasyloricaria have a restricted trans-Andean distribution, with D . filamentosa occurring at the lower and middle Magdalena, lower Cauca, and Sinu in Colombia, and lago Maracaibo basin in Colombia and Venezuela; D . latiura in the Atrato and the Tuyra basins in Colombia and Panama, respectively; and the new species in the upper and middle Magdalena basin in Colombia. New synonyms for D . filamentosa and D . latiura are proposed, and a lectotype is designated for the latter. Dasyloricaria is herein recognized as monophyletic, with D . filamentosa as the sister group of D . latiura , and the new speciesas sister to that clade. Spatuloricaria is hypothesized to be the sister group of Dasyloricaria based on synapomorphies of the neurocranium, branchial arches and external morphology features. The subtribe Rineloricariina was partially corroborated through the phylogenetic analysis. An identification key for the species of Dasyloricaria is provided.

Revision of world Ceroptresini (Hymenoptera: Cynipidae) with the description of a new genus and five new species

Zootaxa ◽  
2019 ◽  
Vol 4685 (1) ◽  
pp. 1-67 ◽  
Author(s):  
IRENE LOBATO-VILA ◽  
JULI PUJADE-VILLAR
Keyword(s):  
New Species ◽  
Type Species ◽  
Morphological Traits ◽  
New Genus ◽  
Taxonomic Revision ◽  
Valid Species ◽  
Distribution Data ◽  
The Status ◽  
The Usa ◽  
First Time

A taxonomic revision of the tribe Ceroptresini (Hymenoptera: Cynipidae) is conducted for the first time. Prior to this study, the total number of valid species of Ceroptres, the only genus within Ceroptresini to date, was 23. As a result of this revision, 15 Ceroptres species are retained as valid and one species, Amblynotus ensiger Walsh, 1864, is desynonymized from Ceroptres petiolicola (Osten-Sacken, 1861), being considered here as a valid Ceroptres species: C. ensiger (Walsh, 1864) status verified and comb. nov. An additional five new species are described from Mexico: Ceroptres junquerasi Lobato-Vila & Pujade-Villar sp. nov.; C. lenis Lobato-Vila & Pujade-Villar sp. nov.; C. mexicanus Lobato-Vila & Pujade-Villar sp. nov.; C. nigricrus Lobato-Vila & Pujade-Villar sp. nov.; C. quadratifacies Lobato-Vila & Pujade-Villar sp. nov., increasing the total number of valid Ceroptres species to 21. Ceroptres masudai Abe, 1997 is synonymized with C. kovalevi Belizin, 1973. Ceroptres niger Fullaway, 1911 is transferred to Andricus (Andricus confusus Lobato-Vila & Pujade-Villar comb. nov. and nom. nov.). Five species (Amblynotus inermis Walsh, 1864; Cynips quercusarbos Fitch, 1859; Cynips querficus Fitch, 1859; Cynips quercuspisum Fitch, 1859; and Cynips quercustuber Fitch, 1859) are not considered as valid Ceroptres. The status of Ceroptres quereicola (Shinji, 1938), previously classified as an unplaced species, is commented on. In addition, a Nearctic species from the USA, Ceroptres politus Ashmead, 1896, is here proposed as the type species of a new genus within Ceroptresini: Buffingtonella Lobato-Vila & Pujade-Villar gen. nov. Redescriptions, biological and distribution data, illustrations and keys to genera and species within Ceroptresini are provided. The diagnostic morphological traits of Ceroptresini, Ceroptres and the new genus are discussed. 

scholarly journals Taxonomic revision of the Afrotropical Phytomia Guérin-Méneville (Diptera: Syrphidae)

Zootaxa ◽  
2020 ◽  
Vol 4803 (2) ◽  
pp. 201-250 ◽  
Author(s):  
MARC DE MEYER ◽  
GEORG GOERGEN ◽  
KURT JORDAENS
Keyword(s):  
Taxonomic Revision ◽  
Junior Synonym ◽  
Valid Species ◽  
The Relationship

The Afrotropical representatives of the hoverfly genus Phytomia Guérin-Méneville (Diptera) are revised. In total, 19 species are recognized of which three are new to science: Phytomia austeni sp. nov., P. memnon sp. nov., and P. pallida sp. nov. Phytomia neavei Bezzi is considered a junior synonym of P. kroeberi (Bezzi), P. noctilio Speiser a junior synonym of P. pubipennis Bezzi, and P. ephippium Bezzi a junior synonym of P. melas (Bezzi). Lectotypes are designated for the following species: Megaspis bulligera Austen, Megaspis erratica Bezzi, and Megaspis poensis Bezzi. In addition, unpublished lectotype designations are hereby formally published for the following species: Megaspis bullata Loew, Megaspis curta Loew, and Megaspis capito Loew. Phytomia curta (Loew) is considered a valid species, and differentiated from P. natalensis (Macquart). Phytomia fronto Loew is tentatively considered to belong to the genus Simoides Loew. The relationship between the different Phytomia species, as well as the relationship between Phytomia and Simoides, is briefly discussed based on morphological and DNA data. 

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