Investigating the Conformational Preferences of Transforming Growth Factor-β Isoforms using Targeted Molecular Dynamics Simulations

2009 ◽  
Vol 5 (3) ◽  
pp. 482-490 ◽  
Author(s):  
Daniel J. Warner ◽  
Ian C. Paterson ◽  
Richard B. Sessions
Keyword(s):  
Molecular Dynamics ◽  
Growth Factor ◽  
Molecular Dynamics Simulations ◽  
Transforming Growth Factor ◽  
Transforming Growth Factor Β ◽  
Targeted Molecular Dynamics ◽  
Conformational Preferences ◽  
Dynamics Simulations

scholarly journals Molecular Dynamics Simulations of Small Peptides: Can One Derive Conformational Preferences from ROESY Spectra?

2003 ◽  
Vol 9 (23) ◽  
pp. 5838-5849 ◽  
Author(s):  
Christine Peter ◽  
Magnus Rueping ◽  
Hans Jakob Wörner ◽  
Bernhard Jaun ◽  
Dieter Seebach ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Small Peptides ◽  
Conformational Preferences ◽  
Dynamics Simulations

scholarly journals Inter-helical conformational preferences of HIV-1 TAR-RNA from maximum occurrence analysis of NMR data and molecular dynamics simulations

2016 ◽  
Vol 18 (8) ◽  
pp. 5743-5752 ◽  
Author(s):  
Witold Andrałojć ◽  
Enrico Ravera ◽  
Loïc Salmon ◽  
Giacomo Parigi ◽  
Hashim M. Al-Hashimi ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Conformational Space ◽  
Nmr Data ◽  
Conformational Preferences ◽  
Tar Rna ◽  
Dynamics Simulations ◽  
Maximum Occurrence ◽  
Hiv 1

Molecular dynamics simulations and maximum occurrence distribution identify the same most likely sampled conformations over the available conformational space.

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