Influence of the lone-pair electrons on the stability of the oxygenated complex of heme

1985 ◽  
Vol 24 (26) ◽  
pp. 4450-4452 ◽  
Author(s):  
Shinji Tsuchiya
2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Samuel Tetteh ◽  
Albert Ofori

Abstract The M–Ccarbene bond in metal (M) complexes involving the imidazol-2-ylidene (Im) ligand has largely been described using the σ-donor only model with donation of σ electrons from the sp-hybridized orbital of the carbene carbon into vacant orbitals on the metal centre. Analyses of the M–Ccarbene bond in a series of group IA, IIA and IIIA main group metal complexes show that the M-Im interactions are mostly electrostatic with the M–Ccarbene bond distances greater than the sum of the respective covalent radii. Estimation of the binding energies of a series of metal hydride/fluoride/chloride imidazol-2-ylidene complexes revealed that the stability of the M–Ccarbene bond in these complexes is not always commensurate with the σ-only electrostatic model. Further natural bond orbital (NBO) analyses at the DFT/B3LYP level of theory revealed substantial covalency in the M–Ccarbene bond with minor delocalization of electron density from the lone pair electrons on the halide ligands into antibonding molecular orbitals on the Im ligand. Calculation of the thermodynamic stability of the M–Ccarbene bond showed that these interactions are mostly endothermic in the gas phase with reduced entropies giving an overall ΔG > 0.


Catalysts ◽  
2021 ◽  
Vol 11 (7) ◽  
pp. 766
Author(s):  
Chongyang Li ◽  
Yongli Huang ◽  
Chang Q Sun ◽  
Lei Zhang

Recently, we discovered that the delocalization of nitrogen lone-pair electrons (NLPEs) in five-membered nitrogen heterocycles created a second σ-aromaticity in addition to the prototypical π-aromaticity. Such dual-aromatic compounds, such as the pentazole anion, were proved to have distinct chemistry in comparison to traditional π-aromatics, such as benzene, and were surprisingly unstable, susceptible to electrophilic attack, and relatively difficult to obtain. The dual-aromatics are basic in nature, but prefer not to be protonated when confronting more than three hydronium/ammonium ions, which violates common sense understanding of acid−base neutralization for a reason that is unclear. Here, we carried out 63 test simulations to explore the stability and reactivity of three basic heterocycle anions (pentazole anion N5¯, tetrazole anion N4C1H1¯, and 1,2,4-triazole anion N3C2H2¯) in four types of solvents (acidic ions, H3O+ and NH4+, polar organics, THF, and neutral organics, benzene) with different acidities and concentrations. By quantum mechanical calculations of the electron density, atomistic structure, interatomic interactions, molecular orbital, magnetic shielding, and energetics, we confirmed the presence of dual aromaticity in the heterocyclic anions, and discovered their reactivity to be a competition between their basicity and dual aromaticity. Interestingly, when the acidic ions H3O+/NH4+ are three times more in number than the basic heterocyclic anions, the anions turn to violate acid−base neutralization and remain unprotonated, and the surrounding acidic ions start to show a significant stabilization effect on the studied heterocyclic anions. This work brings new knowledge to nitrogen aromatics and the finding is expected to be adaptable for other pnictogen five-membered ring systems.


2021 ◽  
Vol 2 (1) ◽  
Author(s):  
Nam-Kwang Cho ◽  
Hyun-Jae Na ◽  
Jeeyoung Yoo ◽  
Youn Sang Kim

AbstractBlack-colored (α, γ-phase) CsPbI3 perovskites have a small bandgap and excellent absorption properties in the visible light regime, making them attractive for solar cells. However, their long-term stability in ambient conditions is limited. Here, we demonstrate a strategy to improve structural and electrical long-term stability in γ-CsPbI3 by the use of an ultraviolet-curable polyethylene glycol dimethacrylate (PEGDMA) polymer network. Oxygen lone pair electrons from the PEGDMA are found to capture Cs+ and Pb2+ cations, improving crystal growth of γ-CsPbI3 around PEGDMA. In addition, the PEGDMA polymer network strongly contributes to maintaining the black phase of γ-CsPbI3 for more than 35 days in air, and an optimized perovskite film retained ~90% of its initial electrical properties under red, green, and blue light irradiation.


2002 ◽  
Vol 09 (01) ◽  
pp. 153-158 ◽  
Author(s):  
WEIDONG ZHOU ◽  
D. P. SECCOMBE ◽  
R. Y. L. CHIM ◽  
R. P. TUCKETT

Threshold photoelectron–photoion coincidence (TPEPICO) spectroscopy has been used to investigate the decay dynamics of the valence electronic states of the parent cation of several hydrofluorocarbons (HFC), based on fluorine-substituted ethane, in the energy range 11–25 eV. We present data for CF 3– CHF 2, CF 3– CH 2 F , CF 3– CH 3 and CHF 2– CH 3. The threshold photoelectron spectra (TPES) of these molecules show a common feature of a broad, relatively weak ground state, associated with electron removal from the highest-occupied molecular orbital (HOMO) having mainly C–C σ-bonding character. Adiabatic and vertical ionisation energies for the HOMO of the four HFCs are presented, together with corresponding values from ab initio calculations. For those lower-energy molecular orbitals associated with non-bonding fluorine 2pπ lone pair electrons, these electronic states of the HFC cation decay impulsively by C–F bond fission with considerable release of translational kinetic energy. Appearance energies are presented for formation of the daughter cation formed by such a process (e.g. CF 3– CHF +), together with ab initio energies of the corresponding dissociation channel (e.g. CF 3– CHF + + F ). Values for the translational kinetic energy released are compared with the predictions of a pure-impulsive model.


The theory of molecular and equivalent orbitals developed in previous papers of this series is used to discuss the spatial distribution of lone-pair electrons in molecules such as H 2 O and NH 3 and the part they play in determining the equilibrium configuration. Previous treatments of H 2 O have assumed that the lone pairs are essentially unaltered by molecular formation. It is shown here, on the other hand, that they will be displaced so as to be mainly concentrated on the side of the O-nucleus remote from the hydrogen atoms. An important consequence of this is that the lone-pair electrons will make a contribution to the total dipole moment. Comparison of the experimentally observed moment with an approximate quantitative treatment suggests that, as a result of this, transfer of electrons from the hydrogen atoms to the oxygen does not occur to the extent that has previously been believed. The variation of the spatial distribution of the orbitals of H 2 O with changes of nuclear configuration is examined and it is shown that, in the equilibrium position, the electronic structure can be described approximately by two sets of two equivalent orbitals pointing in nearly tetrahedral directions. The dependence of total energy on bond angle is discussed and it is shown that electrostatic repulsions between the equivalent orbitals are major factors in determining the equilibrium configuration. Similar considerations apply to NH 3 .


2012 ◽  
Vol 249 (10) ◽  
pp. 1902-1906 ◽  
Author(s):  
Alexander V. Kolobov ◽  
Paul Fons ◽  
Junji Tominaga

2018 ◽  
Vol 6 (39) ◽  
pp. 18928-18937 ◽  
Author(s):  
Yuchong Qiu ◽  
Ying Liu ◽  
Jinwen Ye ◽  
Jun Li ◽  
Lixian Lian

Doping Sn into the Cu2Te lattice can synergistically enhance the power factor and decrease thermal conductivity, leading to remarkably optimized zTs. The lone pair electrons from the 5s orbital of Sn can increase the DOS near the Fermi level of Cu2Te to promote PF and reduce κe by decreasing the carrier concentration. This study explores a scalable strategy to optimize the thermoelectric performance for intrinsically highly degenerate semiconductors.


Author(s):  
Dulal C. Ghosh ◽  
Sandip Kumar Rajak

In this report, Ghosh and Rajak have made a detailed quantum mechanical study of the variation of the dipole moment of ammonia as a function of its conformations evolving during the process of its umbrella inversion by invoking their method of dipole correlation of electronic structure as basis. Ghosh et al discover a surprising result that the variation of dipole moment mimics the total energy curve as a function of reaction coordinates revealing the fact that the dipole moment is one possible diagnostic descriptor of the conformational isomerism of molecules containing lone pair electrons. The dipole is calculated and partitioned into bond and lone pair components for a large number of conformations between the equilibrium shape and the transition state of inversion and the results are interpreted and correlated in terms of the localized molecular orbitals, LMOs generated from the canonical molecular orbitals, CMO’s of each conformation. Anderson, from the concept of space time symmetry, postulated that ammonia has zero dipole moment. Present study reveals that Anderson’s correlation relied upon the bond moment only while the major component of dipole of ammonia originates from the lone pair of nitrogen.


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