scholarly journals High-resolution genetic mapping of maize pan-genome sequence anchors

2015 ◽  
Vol 6 (1) ◽  
Author(s):  
Fei Lu ◽  
Maria C. Romay ◽  
Jeffrey C. Glaubitz ◽  
Peter J. Bradbury ◽  
Robert J. Elshire ◽  
...  
Keyword(s):  
High Resolution ◽  
Genetic Mapping ◽  
Genome Sequence ◽  
Pan Genome

Identifying barley pan-genome sequence anchors using genetic mapping and machine learning

2020 ◽  
Vol 133 (9) ◽  
pp. 2535-2544 ◽  
Author(s):  
Shang Gao ◽  
Jinran Wu ◽  
Jiri Stiller ◽  
Zhi Zheng ◽  
Meixue Zhou ◽  
...  
Keyword(s):  
Machine Learning ◽  
Genetic Mapping ◽  
Genome Sequence ◽  
Pan Genome

scholarly journals High-resolution genetic mapping of mammalian motor activity levels in mice

2009 ◽  
Vol 8 (1) ◽  
pp. 13-22 ◽  
Author(s):  
M. J. H. Kas ◽  
J. G. de Mooij-van Malsen ◽  
M. de Krom ◽  
K. L. I. van Gassen ◽  
H. A. van Lith ◽  
...  
Keyword(s):  
High Resolution ◽  
Motor Activity ◽  
Genetic Mapping ◽  
Activity Levels

Genetic mapping of linkage group XIX and identification of sex-linked SSR markers in a Populus tremula × Populus tremuloides cross

2011 ◽  
Vol 41 (2) ◽  
pp. 245-253 ◽  
Author(s):  
Birte Pakull ◽  
Katrin Groppe ◽  
Federica Mecucci ◽  
Muriel Gaudet ◽  
Maurizio Sabatti ◽  
...  
Keyword(s):  
Linkage Group ◽  
Genetic Mapping ◽  
Ssr Markers ◽  
Genome Sequence ◽  
Populus Tremuloides ◽  
Populus Trichocarpa ◽  
Interspecific Cross ◽  
Populus Tremula ◽  
Central Position ◽  
Populus Alba

A progeny of 130 F1 individuals of an interspecific cross between Populus tremula L. and Populus tremuloides Michx. was used for genetic mapping of linkage group XIX with SSR markers based on the Populus trichocarpa Torr. & A. Gray genome sequence. Several fully sex-linked SSR markers were identified and mapped to a central position on the male P. tremuloides map of linkage group XIX. For the SSR markers tested here, the position on the assembled P. trichocarpa genome sequence is known, allowing sex-linked markers to be assigned to the central region of scaffold/chromosome 19 of P. trichocarpa. The sex linkage of the SSR markers was validated in other P. tremula × P. tremuloides crosses and also tested in Populus alba L. and Populus nigra L.

scholarly journals Chloroplast Genome Sequence ofArabidopsis thalianaAccession Landsbergerecta, Assembled from Single-Molecule, Real-Time Sequencing Data

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Kai Bernd Stadermann ◽  
Daniela Holtgräwe ◽  
Bernd Weisshaar
Keyword(s):  
Arabidopsis Thaliana ◽  
High Resolution ◽  
Chloroplast Genome ◽  
Real Time ◽  
Genome Sequence ◽  
Single Molecule ◽  
Sequencing Data ◽  
Data Set ◽  
Chloroplast Genomes ◽  
Chloroplast Genome Sequence

A publicly available data set from Pacific Biosciences was used to create an assembly of the chloroplast genome sequence of theArabidopsis thalianagenotype Landsbergerecta. The assembly is solely based on single-molecule, real-time sequencing data and hence provides high resolution of the two inverted repeat regions typically contained in chloroplast genomes.

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