scholarly journals Meta-analysis reveals that pollinator functional diversity and abundance enhance crop pollination and yield

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
B. A. Woodcock ◽  
M. P. D. Garratt ◽  
G. D. Powney ◽  
R. F. Shaw ◽  
J. L. Osborne ◽  
...  
2020 ◽  
Vol 116 ◽  
pp. 106471 ◽  
Author(s):  
Maísa Assano Matuoka ◽  
Maíra Benchimol ◽  
Juliana Monteiro de Almeida-Rocha ◽  
José Carlos Morante-Filho

2021 ◽  
Vol 9 (2) ◽  
pp. 381
Author(s):  
Robert Starke ◽  
Maysa Lima Parente Fernandes ◽  
Daniel Kumazawa Morais ◽  
Iñaki Odriozola ◽  
Petr Baldrian ◽  
...  

Revealing the relationship between taxonomy and function in microbiomes is critical to discover their contribution to ecosystem functioning. However, while the relationship between taxonomic and functional diversity in bacteria and fungi is known, this is not the case for archaea. Here, we used a meta-analysis of 417 completely annotated extant and taxonomically unique archaeal genomes to predict the extent of microbiome functionality on Earth contained within archaeal genomes using accumulation curves of all known level 3 functions of KEGG Orthology. We found that intergenome redundancy as functions present in multiple genomes was inversely related to intragenome redundancy as multiple copies of a gene in one genome, implying the tradeoff between additional copies of functionally important genes or a higher number of different genes. A logarithmic model described the relationship between functional diversity and species richness better than both the unsaturated and the saturated model, which suggests a limited total number of archaeal functions in contrast to the sheer unlimited potential of bacteria and fungi. Using the global archaeal species richness estimate of 13,159, the logarithmic model predicted 4164.1 ± 2.9 KEGG level 3 functions. The non-parametric bootstrap estimate yielded a lower bound of 2994 ± 57 KEGG level 3 functions. Our approach not only highlighted similarities in functional redundancy but also the difference in functional potential of archaea compared to other domains of life.


2020 ◽  
Author(s):  
Robert Starke

The total microbiome functionality of bacteria was recently predicted to be 35.5 ±0.2 million of KEGG functions. Logically, due to the limitation in space and resource availability of the local community, local functionality will only comprise a small subset of the total functionality but the relationship between taxonomy and functionality is still uncertain. Here, I used a meta-analysis of 139 extant Tara ocean seawater samples from 68 locations across to globe with information on prokaryotic taxonomy on species level from 16S metabarcoding and functionality of prokaryotes on eggNOG gene family level from metagenomes to unveil the relationship between taxonomy and functionality, and to predict the global distribution of functionality. Functional richness showed a statistically significant increase with increasing species richness (P <0.0001, R2 =0.64) and increasing species diversity (P <0.0001, R2 =0.26) while functional diversity was similar across the different waters, ranging from 2.96 to 3.22. Globally, the highest functional richness was found in the Northern Pacific Ocean and in the North Atlantic Ocean, and decreased at extreme latitudes. Taken together, I unveil the relationship between taxonomy and functionality, and predict the global distribution of functional richness in prokaryotes inhabiting aquatic ecosystems, implying more pronounced effects in terrestrial ecosystems due to larger differences in environmental parameters especially for functional diversity.


2022 ◽  
Vol 326 ◽  
pp. 107777
Author(s):  
Alistair John Campbell ◽  
Elinor M. Lichtenberg ◽  
Luísa Gigante Carvalheiro ◽  
Cristiano Menezes ◽  
Rafael Cabral Borges ◽  
...  

Author(s):  
Carolina Gonzálvez ◽  
Fernando Marhuenda-Fluixá

Purpose: Promoting the labour integration of people with functional diversity is a key element to achieve their social inclusion. This meta-analysis aims to examine the effectiveness of experimental programs in developing employable skills for people with disabilities. Methods: Literature searches up to June 2019 were conducted in four databases (Web of Science, Scopus, PsycINFO and ERIC). Studies that met the following criteria were selected: (1) The program should develop employable skills; (2) the participants should be people with functional diversity; (3) the study should have a design with an experimental group and a control group as well as pretest and posttest measurements; (4) the study had to provide enough data to calculate the effect sizes; and (5) the study had to be written in English or Spanish. 67 independent studies met the selection criteria, among 14 articles published between 1998 and 2019. Results: The results revealed mean effect sizes in favour of the experimental group for the set of all studies according to data reported by people with functional diversity, as well as according their relatives and teachers. The two dimensions of the programs with a significant effect size in favour of the experimental group were interview skills and career planning. Furthermore, it was found that the programs showed a higher degree of effectiveness in groups formed only by people with intellectual disabilities, with a lower educational level, whose duration ranged from six to twelve months. This was particularly the case with participants from Spain and Australia. Conclusion: Promoting the labour insertion of people with disability is a key element to achieve their social inclusion. Programs that support and develop employability and that are conducted upon experimental conditions do have a positive impact upon young people with functional diversity. Upon the results, we discuss practical implications for integrating disabled persons into the labour market. 


2014 ◽  
Vol 1 (1) ◽  
pp. 907-945
Author(s):  
M.-A. de Graaff ◽  
J. Adkins ◽  
P. Kardol ◽  
H. L. Throop

Abstract. Loss of biodiversity can impact ecosystem functioning, such as altering carbon (C) cycling rates. Soils are the largest terrestrial C reservoir, containing more C globally than the biotic and atmospheric pools together. As such, soil C cycling, and the processes controlling it, have the potential to affect atmospheric CO2 concentrations and subsequent climate change. Despite the growing evidence of links between plant diversity and soil C cycling, there is a dearth of information on whether similar relationships exist between biodiversity of soil organisms (microbes and soil fauna) and C cycling. This is despite increasing recognition that soil communities display high levels of both taxonomic and functional diversity and are key drivers of fluxes of C between the atmosphere and terrestrial ecosystems. Here, we used meta-analysis and regression analysis to quantitatively assess how soil biodiversity affects soil C cycling pools and processes (i.e., soil C respiration, litter decomposition, and plant biomass). We compared the response of pool amd process variables to changes in biodiversity both within and across trophic groups of organisms. Overall, loss of soil diversity significantly reduced soil C respiration (−27.5%) and plant tissue decomposition (−18%), but did not affect above- and belowground plant biomass. Detailed analyses showed that loss of within-group biodiversity significantly reduced soil C respiration, while loss of across-group diversity did not. Decomposition was negatively affected by losses of both within-group and across-group diversity. Further, loss of microbial diversity strongly reduced soil C respiration (−41%). In contrast, plant tissue decomposition was negatively affected by loss of soil faunal diversity, but was unaffected by loss of microbial diversity. Taken together, our findings show that loss of soil biodiversity can strongly affect soil C cycling processes, and highlight the importance of diversity across organismal groups for maintaining full C cycling functionality. However, our understanding of the complex relationships between soil biodiversity and C cycling processes is currently limited by the sheer number of methodological concerns associated with these studies, which can greatly overestimate or underestimate the impact of soil biodiversity on soil C cycling. These limitations present challenges to extrapolation to natural field settings. Future studies should attempt to further elucidate the relative importance of taxonomic diversity vs. functional diversity.


Ecology ◽  
2018 ◽  
Vol 99 (8) ◽  
pp. 1771-1782 ◽  
Author(s):  
Arran Greenop ◽  
Ben A. Woodcock ◽  
Andy Wilby ◽  
Samantha M. Cook ◽  
Richard F. Pywell

2020 ◽  
Author(s):  
Robert Starke ◽  
Maysa Lima Parente Fernandes ◽  
Daniel Kumazawa Morais ◽  
Iñaki Odriozola ◽  
Nico Jehmlich ◽  
...  

AbstractUnveiling the relationship between taxonomy and function in microbiomes is crucial to determine their contribution to ecosystem functioning. However, while the relationship between taxonomic and functional diversity in bacteria and fungi was reported, this is not the case for archaea. Here, we used a meta-analysis of completely annotated extant genomes of 417 taxonomically unique archaeal species to describe intergenome and intragenome redundancy of functions and to predict the extent of microbiome functionality on Earth contained within archaeal genomes using accumulation curves of all known functions from the level 3 of KEGG Orthology. We found that intergenome redundancy as functions present in multiple genomes was inversely related to intragenome redundancy as multiple copies of a gene in one genome, implying the trade of between additional copies of functionally important genes or a higher number of different genes. A logarithmic model described the relationship between functional diversity and species richness better than both the unsaturated and the saturated model, which suggests a limited total number of archaeal functions in contrast to the potential of bacteria and fungi. Using a global archaeal species richness estimate of 13,159, the logarithmic model predicts a total of 4,164.1 ±2.9 KEGG level 3 functions while the non-parametric bootstrap estimate yields a lower bound of 2,994 ±57 KEGG level 3 functions. Our approach not only highlights similarities in functional redundancy but also the difference in functional potential of archaea compared to other domains of life.


2021 ◽  
Author(s):  
Yali Wei ◽  
Yan Meng ◽  
Na Li ◽  
Qian Wang ◽  
Liyong Chen

The purpose of the systematic review and meta-analysis was to determine if low-ratio n-6/n-3 long-chain polyunsaturated fatty acid (PUFA) supplementation affects serum inflammation markers based on current studies.


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