scholarly journals High-throughput phenotypic screen and transcriptional analysis identify new compounds and targets for macrophage reprogramming

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Guangan Hu ◽  
Yang Su ◽  
Byong Ha Kang ◽  
Zhongqi Fan ◽  
Ting Dong ◽  
...  
Keyword(s):  
High Throughput ◽  
Macrophage Activation ◽  
Transcriptional Analysis ◽  
Dimensional Spectrum ◽  
Phenotypic Screen ◽  
Compound Screening ◽  
Approved Drugs ◽  
New Compounds ◽  
Anti Tumor Activity ◽  
Fda Approved Drugs

AbstractMacrophages are plastic and, in response to different local stimuli, can polarize toward multi-dimensional spectrum of phenotypes, including the pro-inflammatory M1-like and the anti-inflammatory M2-like states. Using a high-throughput phenotypic screen in a library of ~4000 FDA-approved drugs, bioactive compounds and natural products, we find ~300 compounds that potently activate primary human macrophages toward either M1-like or M2-like state, of which ~30 are capable of reprogramming M1-like macrophages toward M2-like state and another ~20 for the reverse repolarization. Transcriptional analyses of macrophages treated with 34 non-redundant compounds identify both shared and unique targets and pathways through which the tested compounds modulate macrophage activation. One M1-activating compound, thiostrepton, is able to reprogram tumor-associated macrophages toward M1-like state in mice, and exhibit potent anti-tumor activity. Our compound-screening results thus help to provide a valuable resource not only for studying the macrophage biology but also for developing therapeutics through modulating macrophage activation.

scholarly journals High-throughput behavioral screen in C. elegans reveals novel Parkinson’s disease drug candidates

2020 ◽  
Author(s):  
Salman Sohrabi ◽  
Danielle E. Mor ◽  
Rachel Kaletsky ◽  
William Keyes ◽  
Coleen T. Murphy
Keyword(s):  
Parkinson’S Disease ◽  
Parkinson's Disease ◽  
High Throughput ◽  
C Elegans ◽  
Drug Candidates ◽  
Branched Chain Amino Acid ◽  
Branched Chain ◽  
Approved Drugs ◽  
Fda Approved Drugs ◽  
Behavioral Screen

AbstractWe recently linked branched-chain amino acid transferase 1 (BCAT1) with the movement disorder Parkinson’s disease (PD), and found that reduction of C. elegans bcat-1 causes abnormal spasm-like ‘curling’ behavior with age. Here, we report the development of a high-throughput automated curling assay and its application to the discovery of new potential PD therapeutics. Four FDA-approved drugs were identified as candidates for late-in-life intervention, with metformin showing the greatest promise for repurposing to PD.

Abstract 100: High-throughput Screening of FDA-approved Drugs Identifies Novel Inhibitors of Macropinocytosis

2018 ◽  
Vol 38 (Suppl_1) ◽  
Author(s):  
Hui-Ping Lin ◽  
Pushpankur Ghoshal ◽  
Bhupesh Singla ◽  
Jessica L Faulkner ◽  
Mary C Shaw ◽  
...  
Keyword(s):  
High Throughput ◽  
High Throughput Screening ◽  
Approved Drugs ◽  
Fda Approved Drugs

scholarly journals High-throughput screening of FDA-approved drugs using oxygen biosensor plates reveals secondary mitofunctional effects

Mitochondrion ◽  
2014 ◽  
Vol 17 ◽  
pp. 116-125 ◽  
Author(s):  
Sunil Sahdeo ◽  
Alexey Tomilov ◽  
Kelly Komachi ◽  
Christine Iwahashi ◽  
Sandipan Datta ◽  
...  
Keyword(s):  
High Throughput ◽  
High Throughput Screening ◽  
Approved Drugs ◽  
Fda Approved Drugs

Identification of new MRP4 inhibitors from a library of FDA approved drugs using a high-throughput bioluminescence screen

2015 ◽  
Vol 93 (3) ◽  
pp. 380-388 ◽  
Author(s):  
Leanna Cheung ◽  
Denise M.T. Yu ◽  
Zillan Neiron ◽  
Tim W. Failes ◽  
Greg M. Arndt ◽  
...  
Keyword(s):  
High Throughput ◽  
Approved Drugs ◽  
Fda Approved Drugs

scholarly journals High-throughput tandem-microwell assay for ammonia repositions FDA-Approved drugs to Helicobacter pylori infection

2021 ◽  
Author(s):  
Fan Liu ◽  
Jing Yu ◽  
Yan-Xia Zhang ◽  
Fangzheng Li ◽  
Qi Liu ◽  
...  
Keyword(s):  
Helicobacter Pylori ◽  
High Throughput ◽  
Acetohydroxamic Acid ◽  
Antibiotic Resistant ◽  
Allosteric Mechanism ◽  
H Pylori ◽  
Approved Drugs ◽  
New Treatments ◽  
High Throughput Assay ◽  
Fda Approved Drugs

ABSTRACTTo date, little attempt has been made to develop new treatments for Helicobacter pylori (H. pylori), although the community is aware of the shortage of treatments for H. pylori. In this study, we developed a 192-tandem-microwell-based high-throughput-assay for ammonia that is a known virulence factor of H. pylori and a product of urease. We could identify few drugs, i.e. panobinostat, dacinostat, ebselen, captan and disulfiram, to potently inhibit the activity of ureases from bacterial or plant species. These inhibitors suppress the activity of urease via substrate-competitive or covalent-allosteric mechanism, but all except captan prevent the antibiotic-resistant H. pylori strain from infecting human gastric cells, with a more pronounced effect than acetohydroxamic acid, a well-known urease inhibitor and clinically used drug for the treatment of bacterial infection. This study offers several bases for the development of new treatments for urease-containing pathogens and to study the mechanism responsible for the regulation of urease activity.

scholarly journals A High-Throughput Screening Approach To Repurpose FDA-Approved Drugs for Bactericidal Applications againstStaphylococcus aureusSmall-Colony Variants

mSphere ◽  
2018 ◽  
Vol 3 (5) ◽  
Author(s):  
Ryan P. Trombetta ◽  
Paul M. Dunman ◽  
Edward M. Schwarz ◽  
Stephen L. Kates ◽  
Hani A. Awad
Keyword(s):  
High Throughput ◽  
Bactericidal Activity ◽  
High Throughput Screening ◽  
Drug Repurposing ◽  
Growth Patterns ◽  
Content Type ◽  
Airway Infections ◽  
Approved Drugs ◽  
Conventional Antibiotics ◽  
Fda Approved Drugs

ABSTRACTDrug repurposing offers an expedited and economical route to develop new clinical therapeutics in comparison to traditional drug development. Growth-based high-throughput screening is concomitant with drug repurposing and enables rapid identification of new therapeutic uses for investigated drugs; however, this traditional method is not compatible with microorganisms with abnormal growth patterns such asStaphylococcus aureussmall-colony variants (SCV). SCV subpopulations are auxotrophic for key compounds in biosynthetic pathways, which result in low growth rate. SCV formation is also associated with reduced antibiotic susceptibility, and the SCV’s ability to revert to the normal cell growth state is thought to contribute to recurrence ofS. aureusinfections. Thus, there is a critical need to identify antimicrobial agents that are potent against SCV in order to effectively treat chronic infections. Accordingly, here we describe adapting an adenylate kinase (AK)-based cell death reporter assay to identify members of a Food and Drug Administration (FDA)-approved drug library that display bactericidal activity againstS. aureusSCV. Four library members, daunorubicin, ketoconazole, rifapentine, and sitafloxacin, exhibited potent SCV bactericidal activity against a stableS. aureusSCV. Further investigation showed that sitafloxacin was potent against methicillin-susceptible and -resistantS. aureus, as well asS. aureuswithin an established biofilm. Taken together, these results demonstrate the ability to use the AK assay to screen small-molecule libraries for SCV bactericidal agents and highlight the therapeutic potential of sitafloxacin to be repurposed to treat chronicS. aureusinfections associated with SCV and/or biofilm growth states.IMPORTANCEConventional antibiotics fail to successfully treat chronic osteomyelitis, endocarditis, and device-related and airway infections. These recurring infections are associated with the emergence of SCV, which are recalcitrant to conventional antibiotics. Studies have investigated antibiotic therapies to treat SCV-related infections but have had little success, emphasizing the need to identify novel antimicrobial drugs. However, drug discovery is a costly and time-consuming process. An alternative strategy is drug repurposing, which could identify FDA-approved and well-characterized drugs that could have off-label utility in treating SCV. In this study, we adapted a high-throughput AK-based assay to identify 4 FDA-approved drugs, daunorubicin, ketoconazole, rifapentine, and sitafloxacin, which display antimicrobial activity againstS. aureusSCV, suggesting an avenue for drug repurposing in order to effectively treat SCV-related infections. Additionally, this screening paradigm can easily be adapted for other drug/chemical libraries to identify compounds bactericidal against SCV.

scholarly journals Morphological Cell Profiling of SARS-CoV-2 Infection Identifies Drug Repurposing Candidates for COVID-19

2020 ◽  
Author(s):  
Carmen Mirabelli ◽  
Jesse W. Wotring ◽  
Charles J. Zhang ◽  
Sean M. McCarty ◽  
Reid Fursmidt ◽  
...  
Keyword(s):  
High Throughput ◽  
Therapeutic Option ◽  
Clinical Care ◽  
Drug Repurposing ◽  
Therapeutic Interventions ◽  
Antiviral Efficacy ◽  
Huh7 Cells ◽  
Approved Drugs ◽  
Fda Approved Drugs

ABSTRACTThe global spread of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and the associated disease COVID-19, requires therapeutic interventions that can be rapidly identified and translated to clinical care. Traditional drug discovery methods have a >90% failure rate and can take 10-15 years from target identification to clinical use. In contrast, drug repurposing can significantly accelerate translation. We developed a quantitative high-throughput screen to identify efficacious agents against SARS-CoV-2. From a library of 1,425 FDA-approved compounds and clinical candidates, we identified 17 dose-responsive compounds with in vitro antiviral efficacy in human liver Huh7 cells and confirmed antiviral efficacy in human colon carcinoma Caco-2, human prostate adenocarcinoma LNCaP, and in a physiologic relevant model of alveolar epithelial type 2 cells (iAEC2s). Additionally, we found that inhibitors of the Ras/Raf/MEK/ERK signaling pathway exacerbate SARS-CoV-2 infection in vitro. Notably, we discovered that lactoferrin, a glycoprotein classically found in secretory fluids, including mammalian milk, inhibits SARS-CoV-2 infection in the nanomolar range in all cell models with multiple modes of action, including blockage of virus attachment to cellular heparan sulfate and enhancement of interferon responses. Given its safety profile, lactoferrin is a readily translatable therapeutic option for the management of COVID-19.IMPORTANCESince its emergence in China in December 2019, SARS-CoV-2 has caused a global pandemic. Repurposing of FDA-approved drugs is a promising strategy for identifying rapidly deployable treatments for COVID-19. Herein, we developed a pipeline for quantitative high-throughput image-based screening of SARS-CoV-2 infection in human cells that led to the identification of several FDA-approved drugs and clinical candidates with in vitro antiviral activity.

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