scholarly journals Daily transcriptomes of the copepod Calanus finmarchicus during the summer solstice at high Arctic latitudes

2020 ◽  
Vol 7 (1) ◽  
Author(s):  
Laura Payton ◽  
Céline Noirot ◽  
Claire Hoede ◽  
Lukas Hüppe ◽  
Kim Last ◽  
...  
Keyword(s):  
Gene Expression ◽  
Sea Ice ◽  
Marine Ecosystem ◽  
High Arctic ◽  
Trophic Levels ◽  
Calanus Finmarchicus ◽  
The Arctic ◽  
Summer Solstice ◽  
Important Species ◽  
Ice Coverage

AbstractThe zooplankter Calanus finmarchicus is a member of the so-called “Calanus Complex”, a group of copepods that constitutes a key element of the Arctic polar marine ecosystem, providing a crucial link between primary production and higher trophic levels. Climate change induces the shift of C. finmarchicus to higher latitudes with currently unknown impacts on its endogenous timing. Here we generated a daily transcriptome of C. finmarchicus at two high Arctic stations, during the more extreme time of Midnight Sun, the summer solstice. While the southern station (74.5 °N) was sea ice-free, the northern one (82.5 °N) was sea ice-covered. The mRNAs of the 42 samples have been sequenced with an average of 126 ± 5 million reads (mean ± SE) per sample, and aligned to the reference transcriptome. We detail the quality assessment of the datasets and the complete annotation procedure, providing the possibility to investigate daily gene expression of this ecologically important species at high Arctic latitudes, and to compare gene expression according to latitude and sea ice-coverage.

scholarly journals Evidence for oscillating circadian clock genes in the copepod Calanus finmarchicus during the summer solstice in the high Arctic

2020 ◽  
Vol 16 (7) ◽  
pp. 20200257 ◽  
Author(s):  
Lukas Hüppe ◽  
Laura Payton ◽  
Kim Last ◽  
David Wilcockson ◽  
Elizaveta Ershova ◽  
...  
Keyword(s):  
Sea Ice ◽  
Circadian Clock ◽  
Environmental Changes ◽  
Clock Genes ◽  
High Arctic ◽  
Calanus Finmarchicus ◽  
The Arctic ◽  
Summer Solstice ◽  
Solar Altitude ◽  
Circadian Clock Genes

The circadian clock provides a mechanism for anticipating environmental cycles and is synchronized by temporal cues such as daily light/dark cycle or photoperiod. However, the Arctic environment is characterized by several months of Midnight Sun when the sun is continuously above the horizon and where sea ice further attenuates photoperiod. To test if the oscillations of circadian clock genes remain in synchrony with subtle environmental changes, we sampled the copepod Calanus finmarchicus, a key zooplankter in the north Atlantic, to determine in situ daily circadian clock gene expression near the summer solstice at a southern (74.5° N) sea ice-free and a northern (82.5° N) sea ice-covered station. Results revealed significant oscillation of genes at both stations, indicating the persistence of the clock at this time. While copepods from the southern station showed oscillations in the daily range, those from the northern station exhibited an increase in ultradian oscillations. We suggest that in C. finmarchicus , even small daily changes of solar altitude seem to be sufficient to entrain the circadian clock and propose that at very high latitudes, in under-ice ecosystems, tidal cues may be used as an additional entrainment cue.

scholarly journals Introduction: Marine Harvesting in the Arctic

2014 ◽  
Vol 71 (7) ◽  
pp. 1932-1933 ◽  
Author(s):  
Tore Haug ◽  
Michaela Aschan ◽  
Alf Håkon Hoel ◽  
Torild Johansen ◽  
Jan H. Sundet
Keyword(s):  
Barents Sea ◽  
Marine Ecosystem ◽  
Trophic Levels ◽  
The Arctic ◽  
Life History Strategies ◽  
Polar Cod ◽  
Polar Regions ◽  
Ice Coverage ◽  
Pagophilus Groenlandicus ◽  
Polar Cod Boreogadus Saida

Abstract In a warmer Arctic, living conditions will change at all trophic levels of the marine ecosystem. Increased air and water temperatures will likely substantially reduce ice coverage. Trophic interactions might change and increased competition between resident Arctic species and invasive species seems likely. A theme session on “Marine harvesting in the Arctic” was held at the international Arctic Frontiers Conference in Tromsø, Norway, in January 2013. The theme session partitioned the topic into two sub-sessions: (i) introduced species, immigration and fate of resident species and (ii) prospective harvesting of marine biological resources in the Arctic. The four articles that follow this introduction are based on presentations made at the Arctic Frontiers theme session. These articles cover topics such as: how ice breeding seals (Pagophilus groenlandicus) can cope with ice retention in the Northwest Atlantic, how planktonic stages of the resident polar cod (Boreogadus saida) and the pole-ward expanding Pacific sand lance (Ammodytes hexapterus) may compete for food in the warming Beaufort Sea, and how the introduced red king crab (Paralithodes camtschaticus) disperse in the Barents Sea. The fourth article shows how differences in the life-history strategies of keystone zooplankton species will likely affect future productivity of commercial fisheries in polar regions.

scholarly journals Sea ice phenology and primary productivity pulses shape breeding success in Arctic seabirds

2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Francisco Ramírez ◽  
Arnaud Tarroux ◽  
Johanna Hovinen ◽  
Joan Navarro ◽  
Isabel Afán ◽  
...  
Keyword(s):  
Sea Ice ◽  
Barents Sea ◽  
Regional Scale ◽  
High Arctic ◽  
Trophic Levels ◽  
The Arctic ◽  
Ice Melt ◽  
Circumpolar Arctic ◽  
Suitable Framework ◽  
Ice Phenology

Abstract Spring sea ice phenology regulates the timing of the two consecutive pulses of marine autotrophs that form the base of the Arctic marine food webs. This timing has been suggested to be the single most essential driver of secondary production and the efficiency with which biomass and energy are transferred to higher trophic levels. We investigated the chronological sequence of productivity pulses and its potential cascading impacts on the reproductive performance of the High Arctic seabird community from Svalbard, Norway. We provide evidence that interannual changes in the seasonal patterns of marine productivity may impact the breeding performance of little auks and Brünnich’s guillemots. These results may be of particular interest given that current global warming trends in the Barents Sea region predict one of the highest rates of sea ice loss within the circumpolar Arctic. However, local- to regional-scale heterogeneity in sea ice melting phenology may add uncertainty to predictions of climate-driven environmental impacts on seabirds. Indeed, our fine-scale analysis reveals that the inshore Brünnich’s guillemots are facing a slower advancement in the timing of ice melt compared to the offshore-foraging little auks. We provide a suitable framework for analyzing the effects of climate-driven sea ice disappearance on seabird fitness.

scholarly journals Risk Assessment for Key Socio-Economic and Ecological Species in a Sub-Arctic Marine Ecosystem Under Combined Ocean Acidification and Warming

Ecosystems ◽  
2021 ◽  
Author(s):  
Maartje Oostdijk ◽  
Erla Sturludóttir ◽  
Maria J. Santos
Keyword(s):  
Ocean Acidification ◽  
Atlantic Cod ◽  
Marine Ecosystem ◽  
Keystone Species ◽  
Ecosystem Model ◽  
The Arctic ◽  
Predatory Fish ◽  
Important Species ◽  
Cascading Effects ◽  
Icelandic Waters

AbstractThe Arctic may be particularly vulnerable to the consequences of both ocean acidification (OA) and global warming, given the faster pace of these processes in comparison with global average speeds. Here, we use the Atlantis ecosystem model to assess how the trophic network of marine fishes and invertebrates in the Icelandic waters is responding to the combined pressures of OA and warming. We develop an approach where we first identify species by their economic (catch value), social (number of participants in fisheries), or ecological (keystone species) importance. We then use literature-determined ranges of sensitivity to OA and warming for different species and functional groups in the Icelandic waters to parametrize model runs for different scenarios of warming and OA. We found divergent species responses to warming and acidification levels; (mainly) planktonic groups and forage fish benefited while (mainly) benthic groups and predatory fish decreased under warming and acidification scenarios. Assuming conservative harvest rates for the largest catch-value species, Atlantic cod, we see that the population is projected to remain stable under even the harshest acidification and warming scenario. Further, for the scenarios where the model projects reductions in biomass of Atlantic cod, other species in the ecosystem increase, likely due to a reduction in competition and predation. These results highlight the interdependencies of multiple global change drivers and their cascading effects on trophic organization, and the continued high abundance of an important species from a socio-economic perspective in the Icelandic fisheries.

scholarly journals Antarctic sea ice variability and trends, 1979–2010

2012 ◽  
Vol 6 (2) ◽  
pp. 931-956 ◽  
Author(s):  
C. L. Parkinson ◽  
D. J. Cavalieri
Keyword(s):  
Indian Ocean ◽  
Sea Ice ◽  
Ross Sea ◽  
Ice Cover ◽  
Weddell Sea ◽  
The Arctic ◽  
Future Research ◽  
Positive Trend ◽  
Antarctic Sea Ice ◽  
Ice Coverage

Abstract. In sharp contrast to the decreasing sea ice coverage of the Arctic, in the Antarctic the sea ice cover has, on average, expanded since the late 1970s. More specifically, satellite passive-microwave data for the period November 1978–December 2010 reveal an overall positive trend in ice extents of 17 100 ± 2300 km2 yr−1. Much of the increase, at 13 700 ± 1500 km2 yr−1, has occurred in the region of the Ross Sea, with lesser contributions from the Weddell Sea and Indian Ocean. One region, that of the Bellingshausen/Amundsen Seas, has, like the Arctic, instead experienced significant sea ice decreases, with an overall ice extent trend of −8200 ± 1200 km2 yr−1. When examined through the annual cycle over the 32-yr period 1979–2010, the Southern Hemisphere sea ice cover as a whole experienced positive ice extent trends in every month, ranging in magnitude from a low of 9100 ± 6300 km2 yr−1 in February to a high of 24 700 ± 10 000 km2 yr−1 in May. The Ross Sea and Indian Ocean also had positive trends in each month, while the Bellingshausen/Amundsen Seas had negative trends in each month, and the Weddell Sea and Western Pacific Ocean had a mixture of positive and negative trends. Comparing ice-area results to ice-extent results, in each case the ice-area trend has the same sign as the ice-extent trend, but differences in the magnitudes of the two trends identify regions with overall increasing ice concentrations and others with overall decreasing ice concentrations. The strong pattern of decreasing ice coverage in the Bellingshausen/Amundsen Seas region and increasing ice coverage in the Ross Sea region is suggestive of changes in atmospheric circulation. This is a key topic for future research.

scholarly journals From sea ice to seals: a moored marine ecosystem observatory in the Arctic

Ocean Science ◽  
2018 ◽  
Vol 14 (6) ◽  
pp. 1423-1433 ◽  
Author(s):  
Claudine Hauri ◽  
Seth Danielson ◽  
Andrew M. P. McDonnell ◽  
Russell R. Hopcroft ◽  
Peter Winsor ◽  
...  
Keyword(s):  
Sea Ice ◽  
Marine Mammals ◽  
Chukchi Sea ◽  
Marine Ecosystem ◽  
Extreme Environment ◽  
The Arctic ◽  
Zooplankton Abundance ◽  
Test Bed ◽  
Ecosystem Monitoring ◽  
Cold Temperatures

Abstract. Although Arctic marine ecosystems are changing rapidly, year-round monitoring is currently very limited and presents multiple challenges unique to this region. The Chukchi Ecosystem Observatory (CEO) described here uses new sensor technologies to meet needs for continuous, high-resolution, and year-round observations across all levels of the ecosystem in the biologically productive and seasonally ice-covered Chukchi Sea off the northwest coast of Alaska. This mooring array records a broad suite of variables that facilitate observations, yielding better understanding of physical, chemical, and biological couplings, phenologies, and the overall state of this Arctic shelf marine ecosystem. While cold temperatures and 8 months of sea ice cover present challenging conditions for the operation of the CEO, this extreme environment also serves as a rigorous test bed for innovative ecosystem monitoring strategies. Here, we present data from the 2015–2016 CEO deployments that provide new perspectives on the seasonal evolution of sea ice, water column structure, and physical properties, annual cycles in nitrate, dissolved oxygen, phytoplankton blooms, and export, zooplankton abundance and vertical migration, the occurrence of Arctic cod, and vocalizations of marine mammals such as bearded seals. These integrated ecosystem observations are being combined with ship-based observations and modeling to produce a time series that documents biological community responses to changing seasonal sea ice and water temperatures while establishing a scientific basis for ecosystem management.

scholarly journals Antarctic sea ice variability and trends, 1979–2010

2012 ◽  
Vol 6 (4) ◽  
pp. 871-880 ◽  
Author(s):  
C. L. Parkinson ◽  
D. J. Cavalieri
Keyword(s):  
Indian Ocean ◽  
Sea Ice ◽  
Ross Sea ◽  
Ice Cover ◽  
Weddell Sea ◽  
The Arctic ◽  
Future Research ◽  
Positive Trend ◽  
Antarctic Sea Ice ◽  
Ice Coverage

Abstract. In sharp contrast to the decreasing sea ice coverage of the Arctic, in the Antarctic the sea ice cover has, on average, expanded since the late 1970s. More specifically, satellite passive-microwave data for the period November 1978–December 2010 reveal an overall positive trend in ice extents of 17 100 ± 2300 km2 yr−1. Much of the increase, at 13 700 ± 1500 km2 yr−1, has occurred in the region of the Ross Sea, with lesser contributions from the Weddell Sea and Indian Ocean. One region, that of the Bellingshausen/Amundsen Seas, has (like the Arctic) instead experienced significant sea ice decreases, with an overall ice extent trend of −8200 ± 1200 km2 yr−1. When examined through the annual cycle over the 32-yr period 1979–2010, the Southern Hemisphere sea ice cover as a whole experienced positive ice extent trends in every month, ranging in magnitude from a low of 9100 ± 6300 km2 yr−1 in February to a high of 24 700 ± 10 000 km2 yr−1 in May. The Ross Sea and Indian Ocean also had positive trends in each month, while the Bellingshausen/Amundsen Seas had negative trends in each month, and the Weddell Sea and western Pacific Ocean had a mixture of positive and negative trends. Comparing ice-area results to ice-extent results, in each case the ice-area trend has the same sign as the ice-extent trend, but the magnitudes of the two trends differ, and in some cases these differences allow inferences about the corresponding changes in sea ice concentrations. The strong pattern of decreasing ice coverage in the Bellingshausen/Amundsen Seas region and increasing ice coverage in the Ross Sea region is suggestive of changes in atmospheric circulation. This is a key topic for future research.

scholarly journals From sea ice to seals: A moored marine ecosystem observatory in the Arctic

2018 ◽  
Author(s):  
Claudine Hauri ◽  
Seth Danielson ◽  
Andrew M. P. McDonnell ◽  
Russell R. Hopcroft ◽  
Peter Winsor ◽  
...  
Keyword(s):  
Sea Ice ◽  
Marine Mammals ◽  
Chukchi Sea ◽  
Marine Ecosystem ◽  
Extreme Environment ◽  
The Arctic ◽  
Zooplankton Abundance ◽  
Test Bed ◽  
Ecosystem Monitoring ◽  
Cold Temperatures

Abstract. Although Arctic marine ecosystems are changing rapidly, year-round monitoring is currently very limited and presents multiple challenges unique to this region. The Chukchi Ecosystem Observatory (CEO) described here uses new sensor technologies to meet needs for continuous, high resolution, and year-round observations across all levels of the ecosystem in the biologically productive and seasonally ice-covered Chukchi Sea off the northwest coast of Alaska. This mooring array records a broad suite of parameters that facilitate observations, yielding better understanding of physical, chemical and biological couplings, phenologies, and the overall state of this Arctic shelf marine ecosystem. While cold temperatures and eight months of sea ice cover present challenging conditions for the operation of the CEO, this extreme environment also serves as a rigorous test bed for innovative ecosystem monitoring strategies. Here, we present data from the 2015–16 CEO deployments that provide new perspectives on the seasonal evolution of sea ice, water column structure and physical properties, annual cycles in nitrate, dissolved oxygen, phytoplankton blooms and export, zooplankton abundance and vertical migration, the occurrence of Arctic cod, and vocalizations of marine mammals such as bearded seals. These integrated ecosystem observations are being combined with ship-based observations and modeling to produce a time-series that documents biological community responses to changing seasonal sea ice and water temperatures while establishing a scientific basis for ecosystem management.

scholarly journals Analysis of reactive bromine production and ozone depletion in the Arctic boundary layer using 3-D simulations with GEM-AQ: inference from synoptic-scale patterns

2011 ◽  
Vol 11 (8) ◽  
pp. 3949-3979 ◽  
Author(s):  
K. Toyota ◽  
J. C. McConnell ◽  
A. Lupu ◽  
L. Neary ◽  
C. A. McLinden ◽  
...  
Keyword(s):  
Boundary Layer ◽  
Sea Ice ◽  
Ozone Depletion ◽  
Surface Ozone ◽  
High Arctic ◽  
Heterogeneous Reactions ◽  
The Arctic ◽  
Synoptic Scale ◽  
Arctic Boundary Layer ◽  
Surface Snow

Abstract. Episodes of high bromine levels and surface ozone depletion in the springtime Arctic are simulated by an online air-quality model, GEM-AQ, with gas-phase and heterogeneous reactions of inorganic bromine species and a simple scheme of air-snowpack chemical interactions implemented for this study. Snowpack on sea ice is assumed to be the only source of bromine to the atmosphere and to be capable of converting relatively stable bromine species to photolabile Br2 via air-snowpack interactions. A set of sensitivity model runs are performed for April 2001 at a horizontal resolution of approximately 100 km×100 km in the Arctic, to provide insights into the effects of temperature and the age (first-year, FY, versus multi-year, MY) of sea ice on the release of reactive bromine to the atmosphere. The model simulations capture much of the temporal variations in surface ozone mixing ratios as observed at stations in the high Arctic and the synoptic-scale evolution of areas with enhanced BrO column amount ("BrO clouds") as estimated from satellite observations. The simulated "BrO clouds" are in modestly better agreement with the satellite measurements when the FY sea ice is assumed to be more efficient at releasing reactive bromine to the atmosphere than on the MY sea ice. Surface ozone data from coastal stations used in this study are not sufficient to evaluate unambiguously the difference between the FY sea ice and the MY sea ice as a source of bromine. The results strongly suggest that reactive bromine is released ubiquitously from the snow on the sea ice during the Arctic spring while the timing and location of the bromine release are largely controlled by meteorological factors. It appears that a rapid advection and an enhanced turbulent diffusion associated with strong boundary-layer winds drive transport and dispersion of ozone to the near-surface air over the sea ice, increasing the oxidation rate of bromide (Br−) in the surface snow. Also, if indeed the surface snowpack does supply most of the reactive bromine in the Arctic boundary layer, it appears to be capable of releasing reactive bromine at temperatures as high as −10 °C, particularly on the sea ice in the central and eastern Arctic Ocean. Dynamically-induced BrO column variability in the lowermost stratosphere appears to interfere with the use of satellite BrO column measurements for interpreting BrO variability in the lower troposphere but probably not to the extent of totally obscuring "BrO clouds" that originate from the surface snow/ice source of bromine in the high Arctic. A budget analysis of the simulated air-surface exchange of bromine compounds suggests that a "bromine explosion" occurs in the interstitial air of the snowpack and/or is accelerated by heterogeneous reactions on the surface of wind-blown snow in ambient air, both of which are not represented explicitly in our simple model but could have been approximated by a parameter adjustment for the yield of Br2 from the trigger.

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