Single Point Mutation at Arg506 of Factor V Associated with APC Resistance and Venous Thromboembolism: Improved Detection by PCR-Mediated Site-Directed Mutagenesis

1995 ◽  
Vol 74 (05) ◽  
pp. 1379-1380 ◽  
Author(s):  
J P Rabès ◽  
M Trossaert ◽  
J Conard ◽  
M Samama ◽  
P Giraudet ◽  
...  
The Lancet ◽  
1994 ◽  
Vol 343 (8912) ◽  
pp. 1535-1536 ◽  
Author(s):  
J. Voorberg ◽  
J. Roelse ◽  
K. Mertens ◽  
J.A. van Mourik ◽  
R. Koopman ◽  
...  

2022 ◽  
Vol 10 (1) ◽  
pp. 132
Author(s):  
Bingxue Sun ◽  
Guangxue Zhu ◽  
Xuewen Xie ◽  
Ali Chai ◽  
Lei Li ◽  
...  

With the further application of succinate dehydrogenase inhibitors (SDHI), the resistance caused by double mutations in target gene is gradually becoming a serious problem, leading to a decrease of control efficacy. It is important to assess the sensitivity and fitness of double mutations to SDHI in Corynespora cassiicola and analysis the evolution of double mutations. We confirmed, by site-directed mutagenesis, that all double mutations (B-I280V+D-D95E/D-G109V/D-H105R, B-H278R+D-D95E/D-G109V, B-H278Y+D-D95E/D-G109V) conferred resistance to all SDHI and exhibited the increased resistance to at least one fungicide than single point mutation. Analyses of fitness showed that all double mutations had lower fitness than the wild type; most of double mutations suffered more fitness penalties than the corresponding single mutants. We also further found that double mutations (B-I280V+D-D95E/D-G109V/D-H105R) containing low SDHI-resistant single point mutation (B-I280V) exhibited higher resistance to SDHI and low fitness penalty than double mutations (B-H278Y+D-D95E/D-G109V) containing high SDHI-resistant single mutations (B-H278Y). Therefore, we may infer that a single mutation conferring low resistance is more likely to evolve into a double mutation conferring higher resistance under the selective pressure of SDHI. Taken together, our results provide some important reference for resistance management.


Blood ◽  
2016 ◽  
Vol 128 (22) ◽  
pp. 2339-2339
Author(s):  
Shailja Shah ◽  
Alice J. Cohen ◽  
Diana Jacob

Abstract BACKGROUND : Hypercoaguable states are defined as a group of inherited or acquired conditions associated with predisposition to venous thromboembolism(VTE) , arterial thrombosis or both . Of the inherited thrombophilias , Factor V Leiden mutation(FVL) is the most common, with Prothrombin mutation G20210(PT) being the second most common cause, both being inherited as autosomal dominant. FVL is a single point mutation in the gene that codes for coagulation factor V. It renders factor V resistant to inactivation by activated protein C. Heterozygosity for Factor V Leiden occurs in 3-8% of the general US and European populations, homozygosity being very rare. Approximately 10% of FVL heterozygotes develop VTE over their lifetime. The relative risk for VTE is increased three to six fold in Factor V Leiden heterozygotes. PT is a single point mutation (G to A substitution at nucleotide 20210) in the prothrombin gene. This mutation appears to result in elevated concentration of plasma prothrombin. The overall prevalence is approximately 2%. Risk of VTE in individuals who are heterozygous for PT has been estimated to be increased approximately three- to fourfold. However , the relative risk of having one of these mutations in patients presenting with a first time VTE is 15-20% and 6% for FVL and PT respectively . Although these mutations increases the chances of VTE, its association with arterial thrombosis and obstetric complications( recurrent miscarriages , still birth, Intraueterine fetal demise) are not clear. Therefore testing for these mutations is appropriate only in patients with idiopathic VTE, younger patients and or those with family history , recurrent thrombosis , thrombosis in unusual vascular bed. In our institution ,there was a concern that appropriate selections of patients to test for these mutations was not occurring and the cost of inappropriate testing may be adding to the healthcare costs. We performed a retrospective review of indications for thrombophilia testing and its costs over a period of one year at our tertiary medical center. METHODS : All patients who had testing for FVL and PT from June 2015-June 2016 were identified by screening ordered tests done in the special coagulation laboratory. Inpatients and outpatients were included . The clinical data reviewed included age, sex and indication for the tests ordered. Overall cost was calculated for each group. RESULTS : We evaluated 144 patients . The mean age of patients was 51 years (range :7 Weeks - 88 years) Males constituted 51%(74/144), females were 49%(70/144) of the cohort. Both FVL and PT tests were ordered on all the patients. Of 144 patients , only 3 patients tested positive and were heterozygous for FVL and, 1 positive patient was heterozygous for PT. The cost of the test for FVL was $348 and for PT $267 in a standard laboratory. The following table lists the common indications for the tests ordered : *Other included Lung transplant workup 10%, heart transplant work up9% , VAD thrombosis 1%, MI (0.9%) miscarriage 5% and other -10% The number of tests that did not meet the standard criteria for testing were: 103 Only 28 % of testing was done for an appropriate indication (Unprovoked VTE , Recurrent VTE , VTE at an unusal site) Cost associated of unnecessary testing :$63,345 CONCLUSION : Testing for inherited risk factors for VTE when not indicated by standard criteria leads to excess costs for patients and healthcare systems .Education of healthcare providers may limit unnecessary testing and ultimately reduce healthcare costs . Disclosures No relevant conflicts of interest to declare.


1998 ◽  
Vol 79 (04) ◽  
pp. 773-777 ◽  
Author(s):  
Moira Behn ◽  
Marcus Schuermann

SummaryResistance to activated protein C (APC resistance) is the most common cause of thrombophilia and linked to a single point mutation in the factor V gene (G>A transition at nucleotide 1691). In the past, several PCR based methods have been proposed to determine the allelostatus of individual patients from small amounts of blood DNA including PCR followed by restriction fragment length polymorphism detection (PCR-RFLP), PCR using sequence-specific primers (PCR-SSP) and oligonucleotide ligation assay (OLA). Here, we present a novel approach based on the method of peptide nucleic acid(PNA)-mediated PCR clamping which is extremely sensitive to base pair mismatches. If PNAs specific for the two allelic variants are applied separately in each case a clear discrimination between a heterozygous or homozygous normal or homozygous Factor V Leiden status is possible and no further confirmation step is required. In a prospective study, 60 patients with suspected venous thrombosis events were tested and compared to the conventional PCR-RFLP technique. The concordance between both methods was 100%. PNA-based factor V genotyping, therefore, should be considered for large scale screening of those patients considered to be at risk for deep venous thrombosis.


Pathogens ◽  
2020 ◽  
Vol 9 (3) ◽  
pp. 157 ◽  
Author(s):  
Johannes Scholz ◽  
Christine Bächlein ◽  
Ashish K. Gadicherla ◽  
Alexander Falkenhagen ◽  
Simon H. Tausch ◽  
...  

The hepatitis E virus (HEV) causes acute and chronic hepatitis in humans. Investigation of HEV replication is hampered by the lack of broadly applicable, efficient cell culture systems and tools for site-directed mutagenesis of HEV. The cell culture-adapted genotype 3c strain 47832c, which represents a typical genotype predominantly detected in Europe, has previously been used for several basic and applied research studies. Here, a plasmid-based reverse genetics system was developed for this strain, which efficiently rescued the infectious virus without the need for in vitro RNA transcription. The cotransfection of T7 RNA polymerase-expressing BSR/T7 cells with one plasmid encoding the full-length viral genome and two helper plasmids encoding vaccinia virus capping enzymes resulted in the production of infectious HEV, which could be serially passaged on A549/D3 cells. The parental and recombinant virus exhibited similar replication kinetics. A single point mutation creating an additional restriction enzyme site could be successfully introduced into the virus genome of progeny virus, indicating that the system is suitable for site-directed mutagenesis. This system is the first plasmid-based HEV reverse genetics system, as well as the first reverse genetics system for HEV genotype 3c, and should therefore be of broad use for basic and applied HEV research.


1997 ◽  
Vol 77 (02) ◽  
pp. 332-335 ◽  
Author(s):  
Peter J Svensson ◽  
Bengt Zöller ◽  
Björn Dahlbäck

SummaryAPC-resistance is the most common hereditary condition associated with venous thrombosis. It is in a majority of cases due to a single point mutation in the factor V gene (FVR506Q). Currently used functional APC-resistance tests have 85-90% sensitivity and specificity for the FVR506Q mutation. A modified test which includes predilution of patient plasma in factor V depleted plasma has increased the sensitivity and specificity for the factor V mutation. However, neither the original nor the modified APC-resistance test have been evaluated in patients with acute thrombotic events. We have therefore used the original and the modified APC-resistance tests in 220 patients with clinically suspected acute deep venous thrombosis and in 278 healthy controls. The FVR506Q mutation was determined in all patients. The patients were classified as either DVT (deep venous thrombosis)-negative or DVT-positive depending on the outcome of contrast phlebography. In individuals with normal factor V genotype, the original APC-resistance test gave significantly lower APC-ratio values both in DVT-positive and DVT-negative patients than in healthy controls. The specificity of the original APC-resistance test for the FVR506Q mutation in controls and in DVT-negative and DVT-positive patients were 85%, 54% and 28%, respectively, when a cut off APC-ratio of 3.2 which insured 100% sensitivity was used. Using the modified APC-resistance test, essentially no difference in APC-ratios between patients with normal factor V genotype and healthy controls with normal factor V genotype was observed. The modified APC-resistance test had a specificity for the FVR506Q mutation of 98.8% at an APC-ratio cut off of 2.1 which ensured 100% sensitivity. The original APC-resistance test gave lower APC-ratios in women than in men and in patients with acute thrombosis as compared to controls. In conclusion, the modified APC-resistance test is highly sensitive and specific for the FVR506Q mutation. This test can be used in clinical practice as an easy to perform screening test for the FVR506Q allele. Moreover, the test performs equally well in patients with acute suspected venous thrombosis as in healthy controls.


1996 ◽  
Vol 40 (9) ◽  
pp. 1983-1987 ◽  
Author(s):  
Y Q Zhu ◽  
K M Remington ◽  
T W North

We selected mutants of feline immunodeficiency virus (FIV) that are resistant to 2',3'-dideoxy-2',3'-didehydrothymidine (d4T). Two mutants were selected in cultured cells with a stepwise increase in d4T concentration, resulting in mutants able to replicate in 100 microM d4T. These mutants were three- to sixfold more resistant to d4T than wild-type FIV. They were also cross-resistant to 3'-azido-3'-deoxythymidine (AZT), 3'-fluoro-2',3'-dideoxythymidine, 2',3'-dideoxycytidine, 2',3'-dideoxyinosine, and 9-(2-phosphonylmethoxyethyl)adenine, and they were highly resistant to phosphonoformic acid (PFA). Plaque-purified mutants were isolated from each of the mutant populations. The mutant phenotype was stable, because both of the plaque-purified mutants remained d4T resistant even after three passages in the absence of d4T. One of the plaque-purified mutants, designated D4R-3c, was further characterized. Compared with wild-type reverse transcriptase (RT), RT purified from D4R-3c was 3-fold resistant to inhibition by the 5'-triphosphate of d4T, 10-fold resistant to inhibition by the 5'-triphosphate of AZT, and 6-fold resistant to PFA. D4R-3c had a single point mutation in the RT-encoding region of the pol gene at position 2474, resulting in a Val to Ile mutation at codon 47 of the FIV RT. The role of this mutation in d4T resistance was confirmed by site-directed mutagenesis.


1996 ◽  
Vol 313 (2) ◽  
pp. 467-472 ◽  
Author(s):  
Cristina APARICIO ◽  
Björn DAHLBÄCK

Resistance to activated protein C (APC), which is the most prevalent pathogenetic risk factor of thrombosis, is linked to a single point-mutation in the factor V (FV) gene, which predicts replacement of Arg (R) at position 506 with a Gln (Q). This mutation modifies one of three APC-cleavage sites in the heavy chain of activated FV (FVa), suggesting that mutated FVa (FVa:Q506) is at least partially resistant to APC-mediated degradation. To elucidate the molecular mechanisms of APC-resistance and to investigate the functional properties of FV in APC resistance, FV:Q506 was purified from an individual with homozygosity for the Arg to Gln mutation. Intact and activated FV:Q506 were demonstrated to convey APC resistance to FV-deficient plasma. Thrombin- or factor Xa-activated FV:Q506 were found to be approx. 10-fold less sensitive to APC-mediated degradation than normal FVa, at both high and low phospholipid concentrations. The degradation pattern observed on Western blotting suggested that FVa:Q506 was not cleaved at position 506. However, it was slowly cleaved at Arg306, which explains the partial APC sensitivity of FVa:Q506. FV is initially activated during clotting and then rapidly inactivated in a process which depends on the integrity of the protein C anticoagulant system. During clotting of APC-resistant plasma, FV:Q506 was activated in a normal fashion, but then only partially inactivated. In conclusion, the reduced sensitivity of FVa:Q506 to APC-mediated degradation is the molecular basis for the life-long hypercoagulable state which constitutes a risk factor for thrombosis in APC-resistant individuals.


2008 ◽  
Vol 28 (03) ◽  
pp. 103-109 ◽  
Author(s):  
B. Dahlbäck

SummaryVenous thrombosis is a major medical problem annually affecting millions of individuals worldwide. It is a typical multifactorial disease, the pathogenesis involving both environmental and genetic risk factors. A single point mutation in the gene of coagulation factor V (FV), which results in the replacement of Arg506 with a Gln (FV Leiden) is the most common genetic risk factor known to date. The anti - coagulant activated protein C (APC) regulates the activity of FVa by cleaving several sites in FVa, and the Arg506 is one of them. APC resistance, which is the consequence of the FV Arg506Gln mutation, results a lifelong hypercoagulable state that increases the risk of thrombosis. APC resistance was discovered in my laboratory and the first paper was published in 1993. This was the starting point for an avalanche of research in many laboratories and several thousands of articles have been published since on this topic. The medical community amazingly quickly accepted the concept of APC resistance/FV Leiden as a major risk factor for thrombosis and millions of individuals are today tested for this condition. This review is a personal historical annotation about the early days of APC resistance.


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