Fassettia, a new North American genus of family Ceratophyllaceae: evidence based on cladistic analyses of current molecular data of Ceratophyllum

2021 ◽  
Vol 34 (5) ◽  
pp. 431
Author(s):  
Evgeny V. Mavrodiev ◽  
David M. Williams ◽  
Malte C. Ebach ◽  
Anna E. Mavrodieva
Keyword(s):  
North American ◽  
Molecular Data ◽  
Evidence Based ◽  
Cladistic Analyses

Implementing Evidence Based Research

2021 ◽  
Author(s):  
Laura Huey ◽  
Renée J. Mitchell ◽  
Hina Kalyal ◽  
Roger Pegram
Keyword(s):  
North American ◽  
Organizational Structures ◽  
Decision Makers ◽  
Evidence Based ◽  
Barriers To Change ◽  
Police Forces

This practical and accessible guide shows how police forces of all sizes can successfully adopt evidence-based methods. Drawing on experiences of North American policing, it sets out ways for decision makers to reshape practices, strategies and organizational structures, and overcome barriers to change.

scholarly journals Comparative Cladistics: Fossils, Morphological Data Partitions and Lost Branches in the Fossil Tree of Life

2017 ◽  
Author(s):  
Ross Mounce
Keyword(s):  
Large Scale ◽  
Phylogenetic Signal ◽  
Scientific Progress ◽  
Molecular Data ◽  
Morphological Data ◽  
Data Sets ◽  
Phylogenetic Groups ◽  
Use Of Data ◽  
Wide Range ◽  
Cladistic Analyses

In this thesis I attempt to gather together a wide range of cladistic analyses of fossil and extant taxa representing a diverse array of phylogenetic groups. I use this data to quantitatively compare the effect of fossil taxa relative to extant taxa in terms of support for relationships, number of most parsimonious trees (MPTs) and leaf stability. In line with previous studies I find that the effects of fossil taxa are seldom different to extant taxa – although I highlight some interesting exceptions. I also use this data to compare the phylogenetic signal within vertebrate morphological data sets, by choosing to compare cranial data to postcranial data. Comparisons between molecular data and morphological data have been previously well explored, as have signals between different molecular loci. But comparative signal within morphological data sets is much less commonly characterized and certainly not across a wide array of clades. With this analysis I show that there are many studies in which the evidence provided by cranial data appears to be be significantly incongruent with the postcranial data – more than one would expect to see just by the effect of chance and noise alone. I devise and implement a modification to a rarely used measure of homoplasy that will hopefully encourage its wider usage. Previously it had some undesirable bias associated with the distribution of missing data in a dataset, but my modification controls for this. I also take an in-depth and extensive review of the ILD test, noting it is often misused or reported poorly, even in recent studies. Finally, in attempting to collect data and metadata on a large scale, I uncovered inefficiencies in the research publication system that obstruct re-use of data and scientific progress. I highlight the importance of replication and reproducibility – even simple reanalysis of high profile papers can turn up some very different results. Data is highly valuable and thus it must be retained and made available for further re-use to maximize the overall return on research investment.

scholarly journals Bombus (Pyrobombus) johanseni Sladen, 1919, a valid North American bumble bee species, with a new synonymy and comparisons to other “red-banded” bumble bee species in North America (Hymenoptera, Apidae, Bombini)

ZooKeys ◽  
2020 ◽  
Vol 984 ◽  
pp. 59-81
Author(s):  
Cory S. Sheffield ◽  
Ryan Oram ◽  
Jennifer M. Heron
Keyword(s):  
North America ◽  
North American ◽  
Dna Barcode ◽  
Molecular Data ◽  
The Arctic ◽  
Valid Species ◽  
Bumble Bee ◽  
Widespread Species ◽  
Old World ◽  
Northern Canada

The bumble bee (Hymenoptera, Apidae, Bombini, Bombus Latreille) fauna of the Nearctic and Palearctic regions are considered well known, with a few species occurring in both regions (i.e., with a Holarctic distribution), but much of the Arctic, especially in North America, remains undersampled or unsurveyed. Several bumble bee taxa have been described from northern North America, these considered either valid species or placed into synonymy with other taxa. However, some of these synonymies were made under the assumption of variable hair colour only, without detailed examination of other morphological characters (e.g., male genitalia, hidden sterna), and without the aid of molecular data. Recently, Bombus interacti Martinet, Brasero & Rasmont, 2019 was described from Alaska where it is considered endemic; based on both morphological and molecular data, it was considered a taxon distinct from B. lapponicus (Fabricius, 1793). Bombus interacti was also considered distinct from B. gelidus Cresson, 1878, a taxon from Alaska surmised to be a melanistic form of B. lapponicus sylvicola Kirby, 1837, the North American subspecies (Martinet et al. 2019). Unfortunately, Martinet et al. (2019) did not have DNA barcode sequences (COI) for females of B. interacti, but molecular data for a melanistic female specimen matching the DNA barcode sequence of the holotype of B. interacti have been available in the Barcodes of Life Data System (BOLD) since 2011. Since then, additional specimens have been obtained from across northern North America. Also unfortunate was that B. sylvicola var. johanseni Sladen, 1919, another melanistic taxon described from far northern Canada, was not considered. Bombus johanseni is here recognized as a distinct taxon from B. lapponicus sylvicola Kirby, 1837 (sensuMartinet et al. 2019) in the Nearctic region, showing the closest affinity to B. glacialis Friese, 1902 of the Old World. As the holotype male of B. interacti is genetically identical to material identified here as B. johanseni, it is placed into synonymy. Thus, we consider B. johanseni a widespread species occurring across arctic and subarctic North America in which most females are dark, with rarer pale forms (i.e., “interacti”) occurring in and seemingly restricted to Alaska. In addition to B. johanseni showing molecular affinities to B. glacialis of the Old World, both taxa also inhabit similar habitats in the arctic areas of both Nearctic and Palearctic, respectively. It is also likely that many of the specimens identified as B. lapponicus sylvicola from far northern Canada and Alaska might actually be B. johanseni, so that should be considered for future studies of taxonomy, distribution, and conservation assessment of North American bumble bees.

Pentachondra dehiscens sp. nov. - An aberrant new member of Styphelieae

2001 ◽  
Vol 14 (4) ◽  
pp. 513 ◽  
Author(s):  
W. Cherry ◽  
P. A. Gadek ◽  
E. A. Brown ◽  
M. M. Heslewood ◽  
C. J. Quinn
Keyword(s):  
New Species ◽  
New South ◽  
New South Wales ◽  
Molecular Data ◽  
Blue Mountains ◽  
Strong Affinity ◽  
South Wales ◽  
Cladistic Analyses ◽  
Morphological And Molecular Data ◽  
A New Species

A new species of Styphelieae collected from the Blue Mountains region of New South Wales is described. Cladistic analyses of morphological and molecular data show that the species has a strong affinity with the genus Pentachondra. The genus is redefined to accommodate the following features of the new species: a drupaceous fruit with 6–11 locules in which the mesocarp splits to release the separate pyrenes at maturity and a more complex inflorescence.

A revision of the Leptogium saturninum group in North America

2016 ◽  
Vol 48 (5) ◽  
pp. 387-421 ◽  
Author(s):  
Daphne F. STONE ◽  
James W. HINDS ◽  
Frances L. ANDERSON ◽  
James C. LENDEMER
Keyword(s):  
North American ◽  
Morphological Study ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Lower Surface ◽  
Molecular Data ◽  
The North ◽  
Molecular Phylogenetic ◽  
Nrits Sequence

AbstractA revision of the North American members of the Leptogium saturninum group (i.e. species with long lower-surface hairs, isidia, and usually smooth upper surface) is presented based on molecular phylogenetic analyses of mtSSU and nrITS sequence data, together with an extensive morphological study. Three species supported by both molecular and morphological characteristics are recognized: L. acadiense sp. nov. (distinguished by granular saturninum-type isidia, medulla composed of irregularly arranged or perpendicular hyphae), L. cookii sp. nov. (distinguished by cylindrical saturninum-type isidia) and L. hirsutum (distinguished by hirsutum-type isidia and medulla composed of loosely intertwined hyphae). One species supported by morphological characteristics, but for which no molecular data could be generated, is also recognized: L. compactum sp. nov. (distinguished by hirsutum-type isidia and medulla composed of tightly packed hyphae). Finally, L. saturninum (distinguished by granular saturninum-type isidia and medulla composed of perpendicular and parallel hyphae) is supported by morphological characteristics but molecular data from geographically diverse populations, including those near the type locality, indicate that the morphologically defined species is paraphyletic. Leptogium burnetiae is excluded from North American based on morphological study of the type. The species are described and illustrated in detail, and are distinguished morphologically by their isidium development, morphology of mature isidia, and pattern of hyphae in the medulla in transverse sections near lobe margins. A key to the members of the L. saturninum group and related species is also presented.

Phylogenetic analysis based on nuclear DNA and morphology defines a clade of eastern Australian species of Acacia s.s. (section Juliflorae): the 'Acacia longifolia group'

2010 ◽  
Vol 23 (3) ◽  
pp. 162 ◽  
Author(s):  
Gillian K. Brown ◽  
Catherine Clowes ◽  
Daniel J. Murphy ◽  
Pauline Y. Ladiges
Keyword(s):  
Nuclear Dna ◽  
Molecular Data ◽  
Herbarium Specimens ◽  
Nuclear Rdna ◽  
Flora Of Australia ◽  
Informal Group ◽  
Australian Species ◽  
Cladistic Analyses ◽  
Acacia Longifolia ◽  
Morphological And Molecular Data

Seventeen Australian, phyllodinous species of Acacia s.s. (from sections Juliflorae and Phyllodineae) were analysed to test the monophyly and relationships of ‘the Acacia longifolia group’, an informal group recognised in the Flora of Australia. Analyses were based on both morphological and molecular data, with A. triptera as an outgroup. A total of 92 herbarium specimens was investigated, with 15 phyllode, inflorescence, flower, pod and seed characters scored. The ITS and ETS regions of nuclear rDNA were sequenced and combined with a larger dataset sampled from species of all major clades of Acacia, totalling 65 accessions. Cladistic analyses provided evidence of a clade that defines the A. longifolia group as follows: A. alpina, A. axillaris, A. courtii, A. dallachiana, A. derwentiana, A. floribunda, A. longifolia subsp. longifolia and A. longifolia subsp. sophorae, A. longissima, A. maidenii, A. mucronata, A. obtusifolia, A. orites, A. oxycedrus, A. phlebophylla, A. rhigiophylla and A. riceana (all sect. Juliflorae), but excluding A. verticillata (section Juliflorae) and A. genistifolia (section Phyllodineae). The A. longifolia group is recognised as including south-eastern Australian species with cylindrically spiked inflorescences and phyllodes with prominent anastomosing venation.

Distinction of Cladonia rei and C. subulata based on molecular, chemical and morphological characteristics

2010 ◽  
Vol 42 (4) ◽  
pp. 373-386 ◽  
Author(s):  
Christian DOLNIK ◽  
Andreas BECK ◽  
Daria ZARABSKA
Keyword(s):  
North American ◽  
Morphological Characteristics ◽  
Distinct Species ◽  
Molecular Data ◽  
Molecular Methods ◽  
Chemical Feature ◽  
Dry Grasslands ◽  
American Sample ◽  
North American Sample

AbstractCladonia rei and Cladonia subulata are morphologically similar, but chemically different cup lichens of dry grasslands and nutrient-poor ruderal habitats. Recently, C. rei has been synonymized with C. subulata on the basis of combined morphological and chemical investigations. However, doubts remained due to a molecular divergent North American sample of C. rei compared to European C. subulata. To clarify the situation, using molecular methods, we analysed chemically different European samples of C. rei and C. subulata, as well as other morphologically or chemically similar Cladonia species. Molecular data show that European and North American samples of C. rei belong to the same clade, which is closely related to C. fimbriata and followed by a subclade with C. coniocraea and C. ochrochlora. The subclade of C. subulata appears to be distinct from C. rei. In concordance with molecular data, the presence of homosekikaic acid is the determining chemical feature for C. rei. In addition, C. humilis and C. innominata proved to be molecularly distinct species.

Phylogeny of the Bryopsidaceae (Bryopsidales, Chlorophyta): cladistic analyses of morphological and molecular data

Phycologia ◽  
2000 ◽  
Vol 39 (6) ◽  
pp. 471-481 ◽  
Author(s):  
Geoffrey W. Woolcott ◽  
Kristin Knöller ◽  
Robert J. King
Keyword(s):  
Molecular Data ◽  
Cladistic Analyses ◽  
Morphological And Molecular Data

scholarly journals Coevolution of Information Sharing and Implementation of Evidence-Based Practices Among North American Tobacco Cessation Quitlines

2015 ◽  
Vol 105 (9) ◽  
pp. 1814-1822 ◽  
Author(s):  
Liesbeth Mercken ◽  
Jessie E. Saul ◽  
Robin H. Lemaire ◽  
Thomas W. Valente ◽  
Scott J. Leischow
Keyword(s):  
Information Sharing ◽  
North American ◽  
Tobacco Cessation ◽  
Evidence Based ◽  
Evidence Based Practices
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