scholarly journals Malate-dependent Fe accumulation is a critical checkpoint in the root developmental response to low phosphate

2017 ◽  
Vol 114 (17) ◽  
pp. E3563-E3572 ◽  
Author(s):  
Javier Mora-Macías ◽  
Jonathan Odilón Ojeda-Rivera ◽  
Dolores Gutiérrez-Alanís ◽  
Lenin Yong-Villalobos ◽  
Araceli Oropeza-Aburto ◽  
...  
Keyword(s):  
Primary Root ◽  
Root System Architecture ◽  
Root Apical Meristem ◽  
Root Tip ◽  
Al Tolerance ◽  
Short Root ◽  
Meristematic Cells ◽  
Isolation And Characterization ◽  
Root Response ◽  
Primary Root Growth

Low phosphate (Pi) availability constrains plant development and seed production in both natural and agricultural ecosystems. When Pi is scarce, modifications of root system architecture (RSA) enhance the soil exploration ability of the plant and lead to an increase in Pi uptake. In Arabidopsis, an iron-dependent mechanism reprograms primary root growth in response to low Pi availability. This program is activated upon contact of the root tip with low-Pi media and induces premature cell differentiation and the arrest of mitotic activity in the root apical meristem, resulting in a short-root phenotype. However, the mechanisms that regulate the primary root response to Pi-limiting conditions remain largely unknown. Here we report on the isolation and characterization of two low-Pi insensitive mutants (lpi5 and lpi6), which have a long-root phenotype when grown in low-Pi media. Cellular, genomic, and transcriptomic analysis of low-Pi insensitive mutants revealed that the genes previously shown to underlie Arabidopsis Al tolerance via root malate exudation, known as SENSITIVE TO PROTON RHIZOTOXICITY (STOP1) and ALUMINUM ACTIVATED MALATE TRANSPORTER 1 (ALMT1), represent a critical checkpoint in the root developmental response to Pi starvation in Arabidopsis thaliana. Our results also show that exogenous malate can rescue the long-root phenotype of lpi5 and lpi6. Malate exudation is required for the accumulation of Fe in the apoplast of meristematic cells, triggering the differentiation of meristematic cells in response to Pi deprivation.

scholarly journals Malate-dependent Fe accumulation is a critical checkpoint in the root developmental response to low phosphate

2016 ◽  
Author(s):  
Javier Mora-Macías ◽  
Jonathan Odilón Ojeda-Rivera ◽  
Dolores Gutiérrez-Alanís ◽  
Lenin Yong-Villalobos ◽  
Araceli Oropeza-Aburto ◽  
...  
Keyword(s):  
Crop Production ◽  
Apical Meristem ◽  
Root System Architecture ◽  
Root Apical Meristem ◽  
Root Tip ◽  
Short Root ◽  
Agricultural Ecosystems ◽  
Developmental Program ◽  
Pi Starvation ◽  
Malate Transporter

AbstractLow phosphate (Pi) availability constrains plant development and crop production in both natural and agricultural ecosystems. When Pi is scarce, modifications of root system architecture (RSA) enhance soil exploration ability and can lead to an increase in Pi uptake. In Arabidopsis, an iron-dependent determinate developmental program that induces premature differentiation in the root apical meristem (RAM) begins when the root tip contacts low Pi media, resulting in a short-root phenotype. However, the mechanisms that enable the regulation of root growth in response to Pi-limiting conditions remain largely unknown. Cellular, genomic and transcriptomic analysis of low-Pi insensitive mutants revealed that the malate-exudation related genes SENSITIVE TO PROTON RHIZOTOXICITY (STOP1) and ALUMINUM ACTIVATED MALATE TRANSPORTER 1 (ALMT1) represent a critical checkpoint in the root developmental response to Pi starvation in Arabidopsis thaliana.

Identification and characterization of novel QTL conferring internal detoxification of aluminum in soybean

2021 ◽  
Author(s):  
Yang Li ◽  
Heng Ye ◽  
Li Song ◽  
Tri D Vuong ◽  
Qijian Song ◽  
...  
Keyword(s):  
Root Length ◽  
Root Elongation ◽  
Primary Root ◽  
Pedigree Analysis ◽  
Length Ratio ◽  
Root Tip ◽  
Root Initiation ◽  
Al Tolerance ◽  
Al Stress ◽  
Root Length Ratio

Abstract Aluminum (Al) toxicity inhibits soybean root growth, leading to insufficient water and nutrient uptake. In this research, two soybean lines (Magellan and PI 567731) were identified differing in Al tolerance as determined by primary root length ratio (PRL_Ratio), total root length ratio (TRL_Ratio), and root tip number ratio (RTN_Ratio) under Al stress compared to unstressed controlled conditions. Serious root necrosis was observed in PI 567731, but not in Magellan under Al stress. An F8 recombinant inbred line population derived from a cross between Magellan and PI 567731 was used to map the quantitative trait loci (QTL) for Al-tolerance. Three QTL on chromosomes 3, 13, and 20, with tolerant-alleles from Magellan, were identified. qAl_Gm13 and qAl_Gm20, explained large phenotypic variations (13-27%) and played roles in maintaining root elongation. qAl_Gm03 was involved in maintaining root initiation under Al stress. These results suggested the importance of using the parameters of root elongation and root initiation in Al tolerance studies. In addition, qAl_Gm13 and qAl_Gm20 were confirmed in near-isogenic backgrounds and were identified to epistatically regulate Al tolerance in internal detoxification instead of Al 3+ exclusion. The candidate genes for qAl_Gm13 and qAl_Gm20 were suggested by analyzing a previous RNA-seq study. Phylogenetic and pedigree analysis identified the tolerant alleles of both loci derived from the US ancestor line, A.K.[FC30761], originally from China. Our results provide novel genetic resources for breeding Al-tolerant soybeans and suggest that the internal detoxification contributes to soybean tolerance to excessive soil Al.

scholarly journals AT-HOOK MOTIF NUCLEAR LOCALISED PROTEIN 18 as a Novel Modulator of Root System Architecture

2020 ◽  
Author(s):  
Marek Šírl ◽  
Tereza Šnajdrová ◽  
Dolores Gutiérrez-Alanís ◽  
Joseph G. Dubrovsky ◽  
Jean Phillipe Vielle-Calzada ◽  
...  
Keyword(s):  
Root System ◽  
System Architecture ◽  
Lateral Root ◽  
Apical Meristem ◽  
Lateral Roots ◽  
Primary Root ◽  
Root System Architecture ◽  
Root Apical Meristem ◽  
Root Initiation ◽  
Lateral Root Initiation

The AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN (AHL) gene family encodes embryophyte-specific nuclear proteins with DNA binding activity. They modulate gene expression and affect various developmental processes in plants. We identify AHL18 (At3G60870) as a developmental modulator of root system architecture and growth. AHL18 regulates the length of the proliferation domain and number of dividing cells in the root apical meristem and thereby, cell production. Both primary root growth and lateral root development respond according to AHL18 transcription level. The ahl18 knock-out plants show reduced root systems due to a shorter primary root and a lower number of lateral roots. This change results from a higher number of arrested and non-developing lateral root primordia (LRP) rather than from decreased initiation. Overexpression of AHL18 results in a more extensive root system, longer primary roots, and increased density of lateral root initiation events. Formation of lateral roots is affected during the initiation of LRP and later development. AHL18 regulate root apical meristem activity, lateral root initiation and emergence, which is in accord with localization of its expression.

scholarly journals Strigolactones Control Root System Architecture and Tip Anatomy in Solanum lycopersicum L. Plants under P Starvation

Plants ◽  
2020 ◽  
Vol 9 (5) ◽  
pp. 612 ◽  
Author(s):  
Veronica Santoro ◽  
Michela Schiavon ◽  
Francesco Gresta ◽  
Andrea Ertani ◽  
Francesca Cardinale ◽  
...  
Keyword(s):  
Solanum Lycopersicum ◽  
Lateral Root ◽  
Primary Root ◽  
Root Traits ◽  
Root System Architecture ◽  
Root Tip ◽  
Root Number ◽  
Wild Type ◽  
Solanum Lycopersicum L ◽  
P Supply

The hormones strigolactones accumulate in plant roots under phosphorus (P) shortage, inducing variations in plant phenotype. In this study, we aimed at understanding whether strigolactones control morphological and anatomical changes in tomato (Solanum lycopersicum L.) roots under varying P supply. Root traits were evaluated in wild-type seedlings grown in high vs. low P, with or without exogenous strigolactones, and in wild-type and strigolactone-depleted plants grown first under high vs. no P, and then under high vs. no P after acclimation on low P. Exogenous strigolactones stimulated primary root and lateral root number under low P. Root growth was reduced in strigolactone-depleted plants maintained under continuous P deprivation. Total root and root hair length, lateral root number and root tip anatomy were impaired by low strigolactone biosynthesis in plants grown under low P or transferred from low to no P. Under adequate P conditions, root traits of strigolactone-depleted and wild-type plants were similar. Concluding, our results indicate that strigolactones (i) control macro- and microscopic changes of root in tomato depending on P supply; and (ii) do not affect root traits significantly when plants are supplemented with adequate P, but are needed for acclimation to no P and typical responses to low P.

scholarly journals Nitrate Induction of Primary Root Growth Requires Cytokinin Signaling in Arabidopsis thaliana

2019 ◽  
Vol 61 (2) ◽  
pp. 342-352 ◽  
Author(s):  
Pamela A Naulin ◽  
Grace I Armijo ◽  
Andrea S Vega ◽  
Karem P Tamayo ◽  
Diana E Gras ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Cell Division ◽  
Root Growth ◽  
Primary Root ◽  
Growth Arrest ◽  
Root Tip ◽  
Wild Type ◽  
Cytokinin Signaling ◽  
Control Growth ◽  
Primary Root Growth

Abstract Nitrate can act as a potent signal to control growth and development in plants. In this study, we show that nitrate is able to stimulate primary root growth via increased meristem activity and cytokinin signaling. Cytokinin perception and biosynthesis mutants displayed shorter roots as compared with wild-type plants when grown with nitrate as the only nitrogen source. Histological analysis of the root tip revealed decreased cell division and elongation in the cytokinin receptor double mutant ahk2/ahk4 as compared with wild-type plants under a sufficient nitrate regime. Interestingly, a nitrate-dependent root growth arrest was observed between days 5 and 6 after sowing. Wild-type plants were able to recover from this growth arrest, while cytokinin signaling or biosynthesis mutants were not. Transcriptome analysis revealed significant changes in gene expression after, but not before, this transition in contrasting genotypes and nitrate regimes. We identified genes involved in both cell division and elongation as potentially important for primary root growth in response to nitrate. Our results provide evidence linking nitrate and cytokinin signaling for the control of primary root growth in Arabidopsis thaliana.

Hydrogen peroxide plays an important role in PERK4-mediated abscisic acid-regulated root growth in Arabidopsis

2019 ◽  
Vol 46 (2) ◽  
pp. 165 ◽  
Author(s):  
Xiaonan Ma ◽  
Xiaoran Zhang ◽  
Ling Yang ◽  
Mengmeng Tang ◽  
Kai Wang ◽  
...  
Keyword(s):  
Hydrogen Peroxide ◽  
Abscisic Acid ◽  
Root Growth ◽  
Primary Root ◽  
Root Tip ◽  
Exogenous Aba ◽  
Ros Accumulation ◽  
Primary Root Growth ◽  
Respiratory Burst Oxidase ◽  
Respiratory Burst Oxidase Homologue

Abscisic acid (ABA) is a crucial factor that affects primary root tip growth in plants. Previous research suggests that reactive oxygen species (ROS), especially hydrogen peroxide, are important regulators of ABA signalling in root growth of Arabidopsis. PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 4 (PERK4) plays an important role in ABA responses. Arabidopsis perk4 mutants display attenuated sensitivity to ABA, especially in primary root growth. To gain insights into the mechanism(s) of PERK4-associated ABA inhibition of root growth, in this study we investigated the involvement of ROS in this process. Normal ROS accumulation in the primary root in response to exogenous ABA treatment was not observed in perk4 mutants. PERK4 deficiency prohibits ABA-induced expression of RESPIRATORY BURST OXIDASE HOMOLOGUE (RBOH) genes, therefore the perk4-1 mutant showed decreased production of ROS in the root. The perk4-1/rbohc double mutant displayed the same phenotype as the perk4 and rbohc single mutants in response to exogenous ABA treatment. The results suggest that PERK4-stimulated ROS accumulation during ABA-regulated primary root growth may be mediated by RBOHC.

scholarly journals Analysis of the rrl3 Mutants Reveals the Importance of Arginine Biosynthesis in the Maintenance of Root Apical Meristem in Rice

2017 ◽  
Vol 7 (1) ◽  
pp. 36
Author(s):  
Israt J. Shelley ◽  
Sayaka Watanabe ◽  
Hiroaki Ozaki ◽  
Nobuhiro Nagasawa ◽  
Atsushi Ogawa ◽  
...  
Keyword(s):  
Apical Meristem ◽  
Culture Medium ◽  
Root Apical Meristem ◽  
Root Tip ◽  
Quiescent Center ◽  
Carbamoyl Phosphate Synthetase ◽  
Arginine Biosynthesis ◽  
Carbamoyl Phosphate ◽  
Short Root ◽  
Spatiotemporal Expression

We characterized reduced root length3(rrl3) mutantsof rice that exhibit a short-root phenotype under conditions producing mechanical impediments to growth, such as aerated water culture medium. The mutants were not able to maintain the quiescent center (QC) identity and produced disorganized root apical meristem (RAM) under aeration because of impaired cell division. A map-based cloning approach showed that RRL3 encodes carbamoyl phosphate synthetase (CPS) which is thought to be required for the conversion of ornithine into citrulline during arginine biosynthesis. The RRL3 gene is expressed highly at the root tip area that includes the root cap and division zone. The RRL3 gene expression level was greatly affected by aeration treatment, indicating that the spatiotemporal expression of the RRL3 gene with respect to the aeration is important for the maintenance of RAM. Furthermore, the application of citrulline and arginine could rescue the root phenotype, which implied that arginine biosynthesis was impaired in the rrl3-1 mutant. These results suggest that the RRL3 regulated arginine biosynthesis is important for the maintenance of RAM organization in the presence of mechanical impediments. 

scholarly journals Disruption of CYCLOPHILIN 38 function reveals a photosynthesis-dependent systemic signal controlling lateral root emergence

2020 ◽  
Author(s):  
Lina Duan ◽  
Juan Manuel Pérez-Ruiz ◽  
Francisco Javier Cejudo ◽  
José R. Dinneny
Keyword(s):  
Root Growth ◽  
Root System ◽  
Lateral Root ◽  
System Development ◽  
Lateral Roots ◽  
Primary Root ◽  
Root System Architecture ◽  
Minor Effect ◽  
Low Light ◽  
Primary Root Growth

AbstractPhotosynthesis in leaves generates the fixed-carbon resources and essential metabolites that support sink tissues, such as roots [1]. One of these products, sucrose, is known to promote primary root growth, but it is not clear what other molecules may be involved and whether other stages of root system development are affected by photosynthate levels [2]. Through a mutant screen to identify pathways regulating root system architecture, we identified a mutation in the CYCLOPHILIN 38 (CYP38) gene, which causes an accumulation of pre-emergent stage lateral roots, with a minor effect on primary root growth. CYP38 was previously reported to maintain the stability of Photosystem II (PSII) in chloroplasts [3]. CYP38 expression is enriched in the shoot and grafting experiments show that the gene acts non-cell autonomously to promote lateral root emergence. Growth of wild-type plants under low light conditions phenocopied the cyp38 lateral root emergence phenotype as did the inhibition of PSII-dependent electron transport or NADPH production. Importantly, the cyp38 root phenotype is not rescued by exogenous sucrose, suggesting the involvement of another metabolite. Auxin (IAA) is an essential hormone promoting root growth and its biosynthesis from tryptophan is dependent on reductant generated during photosynthesis [4,5]. Both WT seedlings grown under low light and cyp38 mutants have highly diminished levels of IAA in root tissues. The cyp38 lateral root defect is rescued by IAA treatment, revealing that photosynthesis promotes lateral root emergence partly through IAA biosynthesis. Metabolomic profiling shows that the accumulation of several defense-related metabolites are also photosynthesis-dependent, suggesting that the regulation of a number of energy-intensive pathways are down-regulated when light becomes limiting.

Nitrate inhibits primary root growth by reducing accumulation of reactive oxygen species in the root tip in Medicago truncatula

2020 ◽  
Vol 146 ◽  
pp. 363-373 ◽  
Author(s):  
Lili Zang ◽  
Marie-Christine Morère-Le Paven ◽  
Thibault Clochard ◽  
Alexis Porcher ◽  
Pascale Satour ◽  
...  
Keyword(s):  
Reactive Oxygen Species ◽  
Root Growth ◽  
Medicago Truncatula ◽  
Primary Root ◽  
Reactive Oxygen ◽  
Root Tip ◽  
Oxygen Species ◽  
Primary Root Growth

scholarly journals Pyocyanin, a Virulence Factor Produced by Pseudomonas aeruginosa, Alters Root Development Through Reactive Oxygen Species and Ethylene Signaling in Arabidopsis

2014 ◽  
Vol 27 (4) ◽  
pp. 364-378 ◽  
Author(s):  
Randy Ortiz-Castro ◽  
Ramón Pelagio-Flores ◽  
Alfonso Méndez-Bravo ◽  
León Francisco Ruiz-Herrera ◽  
Jesús Campos-García ◽  
...  
Keyword(s):  
Reactive Oxygen Species ◽  
Pseudomonas Aeruginosa ◽  
Root Growth ◽  
Virulence Factor ◽  
System Architecture ◽  
Primary Root ◽  
Root System Architecture ◽  
Oxygen Species ◽  
Ethylene Signaling ◽  
Primary Root Growth

Pyocyanin acts as a virulence factor in Pseudomonas aeruginosa, a plant and animal pathogen. In this study, we evaluated the effect of pyocyanin on growth and development of Arabidopsis seedlings. Root inoculation with P. aeruginosa PAO1 strain inhibited primary root growth in wild-type (WT) Arabidopsis seedlings. In contrast, single lasI– and double rhlI–/lasI– mutants of P. aeruginosa defective in pyocyanin production showed decreased root growth inhibition concomitant with an increased phytostimulation. Treatment with pyocyanin modulates root system architecture, inhibiting primary root growth and promoting lateral root and root hair formation without affecting meristem viability or causing cell death. These effects correlated with altered proportions of hydrogen peroxide and superoxide in root tips and with an inhibition of cell division and elongation. Mutant analyses showed that pyocyanin modulation of root growth was likely independent of auxin, cytokinin, and abscisic acid but required ethylene signaling because the Arabidopsis etr1-1, ein2-1, and ein3-1 ethylene-related mutants were less sensitive to pyocyanin-induced root stoppage and reactive oxygen species (ROS) distribution. Our findings suggest that pyocyanin is an important factor modulating the interplay between ROS production and root system architecture by an ethylene-dependent signaling.

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