scholarly journals Flavonoids as tyrosinase inhibitors in in silico and in vitro models: basic framework of SAR using a statistical modelling approach

2021 ◽  
Vol 37 (1) ◽  
pp. 421-430
Author(s):  
Katarzyna Jakimiuk ◽  
Suat Sari ◽  
Robert Milewski ◽  
Claudiu T. Supuran ◽  
Didem Şöhretoğlu ◽  
...  
Cells ◽  
2021 ◽  
Vol 10 (11) ◽  
pp. 3175
Author(s):  
Laura Iop ◽  
Sabino Iliceto ◽  
Giovanni Civieri ◽  
Francesco Tona

Rhythm disturbances are life-threatening cardiovascular diseases, accounting for many deaths annually worldwide. Abnormal electrical activity might arise in a structurally normal heart in response to specific triggers or as a consequence of cardiac tissue alterations, in both cases with catastrophic consequences on heart global functioning. Preclinical modeling by recapitulating human pathophysiology of rhythm disturbances is fundamental to increase the comprehension of these diseases and propose effective strategies for their prevention, diagnosis, and clinical management. In silico, in vivo, and in vitro models found variable application to dissect many congenital and acquired rhythm disturbances. In the copious list of rhythm disturbances, diseases of the conduction system, as sick sinus syndrome, Brugada syndrome, and atrial fibrillation, have found extensive preclinical modeling. In addition, the electrical remodeling as a result of other cardiovascular diseases has also been investigated in models of hypertrophic cardiomyopathy, cardiac fibrosis, as well as arrhythmias induced by other non-cardiac pathologies, stress, and drug cardiotoxicity. This review aims to offer a critical overview on the effective ability of in silico bioinformatic tools, in vivo animal studies, in vitro models to provide insights on human heart rhythm pathophysiology in case of sick sinus syndrome, Brugada syndrome, and atrial fibrillation and advance their safe and successful translation into the cardiology arena.


2020 ◽  
Vol 31 (3) ◽  
pp. 314-321 ◽  
Author(s):  
Randolph R.J. Arroo ◽  
Suat Sari ◽  
Burak Barut ◽  
Arzu Özel ◽  
Ketan C. Ruparelia ◽  
...  

2019 ◽  
Vol 136 ◽  
pp. 104945 ◽  
Author(s):  
Cristina Alonso ◽  
Víctor Carrer ◽  
Sonia Espinosa ◽  
Miriam Zanuy ◽  
Mònica Córdoba ◽  
...  

Molecules ◽  
2019 ◽  
Vol 24 (12) ◽  
pp. 2261 ◽  
Author(s):  
Aurora Molinari ◽  
Alfonso Oliva ◽  
Marlene Arismendi-Macuer ◽  
Leda Guzmán ◽  
Waldo Acevedo ◽  
...  

Quinones and nitrogen heterocyclic moieties have been recognized as important pharmacophores in the development of antitumor agents. This study aimed to establish whether there was any correlation between the in silico predicted parameters and the in vitro antiproliferative activity of a family of benzoindazolequinones (BIZQs), and to evaluate overexpressed proteins in human cancer cells as potential biomolecular targets of these compounds. For this purpose, this study was carried out using KATO-III and MCF-7 cell lines as in vitro models. Docking results showed that these BIZQs present better binding energies (ΔGbin) values for cyclooxygenase-2 (COX-2) than for other cancer-related proteins. The predicted ∆Gbin values of these BIZQs, classified in three series, positively correlated with IC50 measured in both cell lines (KATO-III: 0.72, 0.41, and 0.90; MCF-7: 0.79, 0.55, and 0.87 for Series I, II, and III, respectively). The results also indicated that compounds 2a, 2c, 6g, and 6k are the most prominent BIZQs, because they showed better IC50 and ∆Gbin values than the other derivatives. In silico drug absorption, distribution, metabolism, and excretion (ADME) properties of the three series were also analyzed and showed that several BIZQs could be selected as potential candidates for cancer pre-clinical assays.


2016 ◽  
Vol 87 (2) ◽  
pp. 193-202 ◽  
Author(s):  
Ulvi K. Gürsoy ◽  
Fares Zeidán-Chuliá ◽  
Dogukan Yilmaz ◽  
Vural Özdemir ◽  
Juho Mäki-Petäys ◽  
...  

2020 ◽  
Vol 103 ◽  
pp. 104108 ◽  
Author(s):  
Marina Themoteo Varela ◽  
Márcio Ferrarini ◽  
Vitória Gallo Mercaldi ◽  
Bianca da Silva Sufi ◽  
Giovana Padovani ◽  
...  

2021 ◽  
Vol 35 ◽  
pp. 116057
Author(s):  
Jamshaid Ashraf ◽  
Ehsan Ullah Mughal ◽  
Reem I. Alsantali ◽  
Rami J. Obaid ◽  
Amina Sadiq ◽  
...  

Author(s):  
Mahshid Heidari ◽  
Mahboubeh Kabiri

Objectives: In recent years, scientists have taken many efforts for in vitro and in silico modeling of cancerous tumors. In fact, three-dimensional (3D) cultures of multicellular tumor spheroids (MCTSs) are good validators for computational results. The goal of this study is to simulate the 3D early growth of avascular tumors using MCTSs and to compare the in vitro models with the results and predictions of a specific computational modeling framework. Using these two types of models, the importance of metabolic condition on tumor growth behavior and necrosis could be predicted. Materials and methods: We took advantage of a previously developed computational model of tumor growth (constructed by integrating a generic metabolic network model of cancer cells with a multiscale agent-based framework). Among the computational predictions is the importance of glucose accessibility on tumor growth behavior. To study the effect of glucose concentration experimentally, MCTSs were grown in high and low glucose culture media. After that, tumor growth pattern was analyzed by MTT assay, cell counting and propidium iodide (PI) staining. Results: We obviously observed that the rate of necrosis increases and the rate of tumor growth and cell activity decreases as the glucose availability reduces, which is in line with the computational model prediction.


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