scholarly journals Three wall-associated kinases required for rice basal immunity form protein complexes in the plasma membrane

2016 ◽  
Vol 11 (4) ◽  
pp. e1149676 ◽  
Author(s):  
Bastien Cayrol ◽  
Amandine Delteil ◽  
Enrico Gobbato ◽  
Thomas Kroj ◽  
Jean-Benoit Morel
2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Tuomas Huokko ◽  
Tao Ni ◽  
Gregory F. Dykes ◽  
Deborah M. Simpson ◽  
Philip Brownridge ◽  
...  

AbstractHow thylakoid membranes are generated to form a metabolically active membrane network and how thylakoid membranes orchestrate the insertion and localization of protein complexes for efficient electron flux remain elusive. Here, we develop a method to modulate thylakoid biogenesis in the rod-shaped cyanobacterium Synechococcus elongatus PCC 7942 by modulating light intensity during cell growth, and probe the spatial-temporal stepwise biogenesis process of thylakoid membranes in cells. Our results reveal that the plasma membrane and regularly arranged concentric thylakoid layers have no physical connections. The newly synthesized thylakoid membrane fragments emerge between the plasma membrane and pre-existing thylakoids. Photosystem I monomers appear in the thylakoid membranes earlier than other mature photosystem assemblies, followed by generation of Photosystem I trimers and Photosystem II complexes. Redistribution of photosynthetic complexes during thylakoid biogenesis ensures establishment of the spatial organization of the functional thylakoid network. This study provides insights into the dynamic biogenesis process and maturation of the functional photosynthetic machinery.


eLife ◽  
2020 ◽  
Vol 9 ◽  
Author(s):  
Joury S van 't Klooster ◽  
Tan-Yun Cheng ◽  
Hendrik R Sikkema ◽  
Aike Jeucken ◽  
Branch Moody ◽  
...  

Yeast tolerates a low pH and high solvent concentrations. The permeability of the plasma membrane (PM) for small molecules is low and lateral diffusion of proteins is slow. These findings suggest a high degree of lipid order, which raises the question of how membrane proteins function in such an environment. The yeast PM is segregated into the Micro-Compartment-of-Can1 (MCC) and Pma1 (MCP), which have different lipid compositions. We extracted proteins from these microdomains via stoichiometric capture of lipids and proteins in styrene-maleic-acid-lipid-particles (SMALPs). We purified SMALP-lipid-protein complexes by chromatography and quantitatively analyzed periprotein lipids located within the diameter defined by one SMALP. Phospholipid and sterol concentrations are similar for MCC and MCP, but sphingolipids are enriched in MCP. Ergosterol is depleted from this periprotein lipidome, whereas phosphatidylserine is enriched relative to the bulk of the plasma membrane. Direct detection of PM lipids in the 'periprotein space' supports the conclusion that proteins function in the presence of a locally disordered lipid state.


2003 ◽  
Vol 278 (22) ◽  
pp. 20389-20394 ◽  
Author(s):  
Lorian C. Hartgroves ◽  
Joseph Lin ◽  
Hanno Langen ◽  
Tobias Zech ◽  
Arthur Weiss ◽  
...  

1998 ◽  
Vol 9 (8) ◽  
pp. 2217-2229 ◽  
Author(s):  
Lisa A. Hannan ◽  
Sherri L. Newmyer ◽  
Sandra L. Schmid

Clathrin-coated vesicles (CCV) mediate protein sorting and vesicular trafficking from the plasma membrane and the trans-Golgi network. Before delivery of the vesicle contents to the target organelles, the coat components, clathrin and adaptor protein complexes (APs), must be released. Previous work has established that hsc70/the uncoating ATPase mediates clathrin release in vitro without the release of APs. AP release has not been reconstituted in vitro, and nothing is known about the requirements for this reaction. We report a novel quantitative assay for the ATP- and cytosol- dependent release of APs from CCV. As expected, hsc70 is not sufficient for AP release; however, immunodepletion and reconstitution experiments establish that it is necessary. Interestingly, complete clathrin release is not a prerequisite for AP release, suggesting that hsc70 plays a dual role in recycling the constituents of the clathrin coat. This assay provides a functional basis for identification of the additional cytosolic factor(s) required for AP release.


2004 ◽  
Vol 121 (4) ◽  
pp. 546-555 ◽  
Author(s):  
Jonas Kjell ◽  
Allan G. Rasmusson ◽  
Hakan Larsson ◽  
Susanne Widell

2010 ◽  
Vol 190 (5) ◽  
pp. 751-760 ◽  
Author(s):  
Michael P. Krahn ◽  
Johanna Bückers ◽  
Lars Kastrup ◽  
Andreas Wodarz

Apical–basal polarity in Drosophila melanogaster epithelia depends on several evolutionarily conserved proteins that have been assigned to two distinct protein complexes: the Bazooka (Baz)–PAR-6 (partitioning defective 6)–atypical protein kinase C (aPKC) complex and the Crumbs (Crb)–Stardust (Sdt) complex. These proteins operate in a functional hierarchy, in which Baz is required for the proper subcellular localization of all other proteins. We investigated how these proteins interact and how this interaction is regulated. We show that Baz recruits Sdt to the plasma membrane by direct interaction between the Postsynaptic density 95/Discs large/Zonula occludens 1 (PDZ) domain of Sdt and a region of Baz that contains a phosphorylation site for aPKC. Phosphorylation of Baz causes the dissociation of the Baz–Sdt complex. Overexpression of a nonphosphorylatable version of Baz blocks the dissociation of Sdt from Baz, causing phenotypes very similar to those of crb and sdt mutations. Our findings provide a molecular mechanism for the phosphorylation-dependent interaction between the Baz–PAR-3 and Crb complexes during the establishment of epithelial polarity.


2011 ◽  
Vol 195 (5) ◽  
pp. 889-902 ◽  
Author(s):  
Lena Karotki ◽  
Juha T. Huiskonen ◽  
Christopher J. Stefan ◽  
Natasza E. Ziółkowska ◽  
Robyn Roth ◽  
...  

Spatial organization of membranes into domains of distinct protein and lipid composition is a fundamental feature of biological systems. The plasma membrane is organized in such domains to efficiently orchestrate the many reactions occurring there simultaneously. Despite the almost universal presence of membrane domains, mechanisms of their formation are often unclear. Yeast cells feature prominent plasma membrane domain organization, which is at least partially mediated by eisosomes. Eisosomes are large protein complexes that are primarily composed of many subunits of two Bin–Amphiphysin–Rvs domain–containing proteins, Pil1 and Lsp1. In this paper, we show that these proteins self-assemble into higher-order structures and bind preferentially to phosphoinositide-containing membranes. Using a combination of electron microscopy approaches, we generate structural models of Pil1 and Lsp1 assemblies, which resemble eisosomes in cells. Our data suggest that the mechanism of membrane organization by eisosomes is mediated by self-assembly of its core components into a membrane-bound protein scaffold with lipid-binding specificity.


2004 ◽  
Vol 15 (3) ◽  
pp. 1334-1346 ◽  
Author(s):  
Tamara Roitbak ◽  
Christopher J. Ward ◽  
Peter C. Harris ◽  
Robert Bacallao ◽  
Scott A. Ness ◽  
...  

Autosomal dominant polycystic kidney disease (ADPKD) is typified by the accumulation of fluid-filled cysts and abnormalities in renal epithelial cell function. The disease is principally caused by mutations in the gene encoding polycystin-1, a large basolateral plasma membrane protein expressed in kidney epithelial cells. Our studies reveal that, in normal kidney cells, polycystin-1 forms a complex with the adherens junction protein E-cadherin and its associated catenins, suggesting a role in cell adhesion or polarity. In primary cells from ADPKD patients, the polycystin-1/polycystin-2/E-cadherin/β-catenin complex was disrupted and both polycystin-1 and E-cadherin were depleted from the plasma membrane as a result of the increased phosphorylation of polycystin-1. The loss of E-cadherin was compensated by the transcriptional upregulation of the normally mesenchymal N-cadherin. Increased cell surface N-cadherin in the disease cells in turn stabilized the continued plasma membrane localization of β-catenin in the absence of E-cadherin. The results suggest that enhanced phosphorylation of polycystin-1 in ADPKD cells precipitates changes in its localization and its ability to form protein complexes that are critical for the stabilization of adherens junctions and the maintenance of a fully differentiated polarized renal epithelium.


2021 ◽  
Author(s):  
Paul J. Myers ◽  
Christopher M. Furcht ◽  
William M. Deen ◽  
Matthew J. Lazzara

Activation of receptor tyrosine kinases (RTKs) leads to the assembly of multi-membered protein complexes connected by phosphotyrosine-SH2 domain linkages. However, these linkages are relatively weak and reversible, which allows complex disassembly to occur on a time scale that permits phosphatases to dephosphorylate complex members and thereby regulate complex persistence. Here, we generated a computational reaction-diffusion model to predict the length scale over which membrane-bound RTKs can regulate the maintenance of such protein complexes through the intermediary action of diffusible cytoplasmic kinases. Specifically, we show that the RTK EGFR can activate SRC family kinases (SFKs) to maintain the association of SHP2 with phosphorylated GAB1, which activates SHP2, throughout the entire cell volume. This finding is dependent on the ability of SFKs to be activated by EGFR at the plasma membrane and subsequently diffuse through the cytosol, as altering the model topology to permit only SFK activation at the plasma membrane reduces the length scale of GAB1-SHP2 association. Modifying the model topology to neglect GAB1 binding to cytosolic and EGFR-bound GRB2 had little effect on this length scale. Indeed, a model sensitivity analysis identified protein diffusion, SFK inactivation, and GAB1 dephosphorylation as the processes that most strongly control the distance over which GAB1-SHP2 persists distal from EGFR. A model scaling analysis likewise predicted that the length scale of GAB1-SHP2 association is greatly extended compared to that of SFK activation and that GAB1-SHP2 complexes persist throughout the cell volume. Furthermore, the same processes identified in the model sensitivity analysis appeared in the length scale estimate for GAB1-SHP2 association. In vitro experiments using proximity ligation assay and immunofluorescence against GAB1-SHP2 and EGFR, respectively, suggested that GAB1-SHP2 complexes are distributed throughout cells and exist distally from EGFR during EGF stimulation. Overall, our results suggest that GAB1-SHP2 complexes—and thus active SHP2—can persist distally from EGFR due to re-phosphorylation of GAB1 throughout the cytosol by EGFR-activated SFKs.


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