scholarly journals Screening of antagoinistic fluorescent Pseudomonads from rice rhizosphere for growth suppression of Magnaporthe oryzae and their molecular identification

2021 ◽  
Vol 756 (1) ◽  
pp. 012042
Author(s):  
M Z I Zihad ◽  
A Sultana ◽  
F H Tumpa ◽  
S Chakraborty ◽  
M A R Khokon
2020 ◽  
Vol 27 (12) ◽  
pp. 3313-3326
Author(s):  
Nithya Karmegham ◽  
Shanmugaiah Vellasamy ◽  
Balasubramanian Natesan ◽  
Mahaveer P. Sharma ◽  
Dunia A. Al Farraj ◽  
...  

Euphytica ◽  
2015 ◽  
Vol 206 (1) ◽  
pp. 21-31 ◽  
Author(s):  
Jahangir Imam ◽  
Shamshad Alam ◽  
Nimai Prasad Mandal ◽  
Pratyoosh Shukla ◽  
Tilak Raj Sharma ◽  
...  

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Xiaowen Sun ◽  
Wei Ma ◽  
Yin Xu ◽  
Xinmeng Jin ◽  
Hong Ni

ABSTRACT Rahnella aquatilis strain MEM40 is a plant growth-promoting rhizobacterium (PGPR) with antagonism against Magnaporthe oryzae and Fusarium graminearum that was isolated from rice rhizosphere soil in Hubei, China. Here, we report its complete genome sequence, which will increase our understanding of the mechanisms of plant growth promotion and biocontrol.


Author(s):  
S. E. Miller

The techniques for detecting viruses are many and varied including FAT, ELISA, SPIRA, RPHA, SRH, TIA, ID, IEOP, GC (1); CF, CIE (2); Tzanck (3); EM, IEM (4); and molecular identification (5). This paper will deal with viral diagnosis by electron microscopy and will be organized from the point of view of the electron microscopist who is asked to look for an unknown agent--a consideration of the specimen and possible agents rather than from a virologist's view of comparing all the different viruses. The first step is to ascertain the specimen source and select the method of preparation, e. g. negative stain or embedment, and whether the sample should be precleared by centrifugation, concentrated, or inoculated into tissue culture. Also, knowing the type of specimen and patient symptoms will lend suggestions of possible agents and eliminate some viruses, e. g. Rotavirus will not be seen in brain, nor Rabies in stool, but preconceived notions should not prejudice the observer into missing an unlikely pathogen.


2019 ◽  
Vol 476 (21) ◽  
pp. 3227-3240 ◽  
Author(s):  
Shanshan Wang ◽  
Yanxiang Zhao ◽  
Long Yi ◽  
Minghe Shen ◽  
Chao Wang ◽  
...  

Trehalose-6-phosphate (T6P) synthase (Tps1) catalyzes the formation of T6P from UDP-glucose (UDPG) (or GDPG, etc.) and glucose-6-phosphate (G6P), and structural basis of this process has not been well studied. MoTps1 (Magnaporthe oryzae Tps1) plays a critical role in carbon and nitrogen metabolism, but its structural information is unknown. Here we present the crystal structures of MoTps1 apo, binary (with UDPG) and ternary (with UDPG/G6P or UDP/T6P) complexes. MoTps1 consists of two modified Rossmann-fold domains and a catalytic center in-between. Unlike Escherichia coli OtsA (EcOtsA, the Tps1 of E. coli), MoTps1 exists as a mixture of monomer, dimer, and oligomer in solution. Inter-chain salt bridges, which are not fully conserved in EcOtsA, play primary roles in MoTps1 oligomerization. Binding of UDPG by MoTps1 C-terminal domain modifies the substrate pocket of MoTps1. In the MoTps1 ternary complex structure, UDP and T6P, the products of UDPG and G6P, are detected, and substantial conformational rearrangements of N-terminal domain, including structural reshuffling (β3–β4 loop to α0 helix) and movement of a ‘shift region' towards the catalytic centre, are observed. These conformational changes render MoTps1 to a ‘closed' state compared with its ‘open' state in apo or UDPG complex structures. By solving the EcOtsA apo structure, we confirmed that similar ligand binding induced conformational changes also exist in EcOtsA, although no structural reshuffling involved. Based on our research and previous studies, we present a model for the catalytic process of Tps1. Our research provides novel information on MoTps1, Tps1 family, and structure-based antifungal drug design.


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