scholarly journals IDA: a peptide ligand regulating cell separation processes in Arabidopsis

2013 ◽  
Vol 64 (17) ◽  
pp. 5253-5261 ◽  
Author(s):  
Reidunn B. Aalen ◽  
Mari Wildhagen ◽  
Ida M. Stø ◽  
Melinka A. Butenko
2019 ◽  
Author(s):  
Vilde Olsson ◽  
Elwira Smakowska-Luzan ◽  
Maike Breiden ◽  
Peter Marhavy ◽  
Rebecca Schneeweiss ◽  
...  

AbstractThe abscission of floral organs and emergence of lateral roots in Arabidopsis is regulated by the peptide ligand INFLORESCENCE DEFICIENT IN ABSCISSION (IDA) and the receptor protein kinases HAESA (HAE), HAESA-LIKE 2 (HSL2) and members of the SOMATIC EMBRYOGENESIS RECEPTOR KINASE (SERK) family. These cell separation processes lead to induction of defense-associated genes to protect against pathogen invasion. However, the molecular coordination between abscission and immunity has not been thoroughly explored. Here we show that IDA induces a receptor-dependent release of cytosolic calcium and an extracellular release of reactive oxygen species which are signatures of defense responses. IDA promotes heteromerization between HSL2 and RECEPTOR LIKE KINASE 7 (RLK7), a receptor that enhances immunity and pathogen responses, and utilizes this novel signaling module to regulate the expression of defense-associated genes. We propose a molecular mechanism by which IDA drives specific immune response in cells destined for separation to guard them from pathogen attack.


2012 ◽  
pp. 243-273 ◽  
Author(s):  
Zinnia H. Gonzalez-Carranza ◽  
Jeremy A. Roberts

2018 ◽  
pp. 243-273
Author(s):  
Zinnia H. Gonzalez-Carranza ◽  
Jeremy A. Roberts

Plants ◽  
2019 ◽  
Vol 8 (6) ◽  
pp. 143 ◽  
Author(s):  
Timothy John Tranbarger ◽  
Hubert Domonhédo ◽  
Michel Cazemajor ◽  
Carole Dubreuil ◽  
Urs Fischer ◽  
...  

The programmed loss of a plant organ is called abscission, which is an important cell separation process that occurs with different organs throughout the life of a plant. The use of floral organ abscission in Arabidopsis thaliana as a model has allowed greater understanding of the complexities of organ abscission, but whether the regulatory pathways are conserved throughout the plant kingdom and for all organ abscission types is unknown. One important pathway that has attracted much attention involves a peptide ligand-receptor signalling system that consists of the secreted peptide IDA (INFLORESCENCE DEFICIENT IN ABSCISSION) and at least two leucine-rich repeat (LRR) receptor-like kinases (RLK), HAESA (HAE) and HAESA-LIKE2 (HSL2). In the current study we examine the bioactive potential of IDA peptides in two different abscission processes, leaf abscission in Populus and ripe fruit abscission in oil palm, and find in both cases treatment with IDA peptides enhances cell separation and abscission of both organ types. Our results provide evidence to suggest that the IDA–HAE–HSL2 pathway is conserved and functions in these phylogenetically divergent dicot and monocot species during both leaf and fruit abscission, respectively.


2019 ◽  
Vol 9 (4) ◽  
pp. 462-466 ◽  
Author(s):  
Mohammad Javad Raee ◽  
Alireza Ebrahiminezhad ◽  
Mohammad Bagher Ghoshoon ◽  
Ahmad Gholami ◽  
Younes Ghasemi

Introduction:Cell separation is one of the important steps of purification in downstream processes. Some separation techniques such as centrifugation and filtration are expensive and would affect cell viability. Magnetic separation can be a good alternative for laboratory and industrial cell separation processes.Methods:For this purpose, L-lysine coated Iron Oxide Nanoparticles (IONs) were synthesized and used for magnetic separation of Escherichia coli as the most applied microbial cell in biotechnological processes.Results:IONs have successfully decorated the bacterial cells and cells were completely separated by applying an external magnetic field.Conclusion:This study showed that coating of E. coli cells with IONs could help to isolate cells from culture media without using expensive instruments.


Author(s):  
Seyed Ali Tabatabaei ◽  
Mohammad Zabetian Targhi ◽  
Javane Javaherchian ◽  
Marzieh Yaghoubi

Abstract The microfluidics separation has absorbed wide-ranging attention in recent years due to its outstanding advantages in biological, medical, clinical, and diagnostical cell studies. While conventional separation methods failed to render the acceptable performance, microfluidics sorting methods offer many privileges such as high-throughput, user-friendliness, minimizing sample volumes, cost-efficiency, non-invasive procedures, high precision, improved portability, quick processing, etc. Among the inertial microfluidics approaches such as the straight and curved microchannels, although the spiral microchannels, which are the sorts of passive separations, are complicated in concepts and geometries, they have demonstrated auspicious benefits for this purpose. Thus, numerous studies have strived to explain the principle of particle migrating and forces in these complex microchannels. However, a comprehensive understanding is still necessary. On the other side, it is manifest that the diagnosis and separation of circulating tumor cells from the blood are significant for targeted treatments of this detrimental disease. Therefore, this study aims to review the previous investigations and developments for understanding the circulating tumor cell separation using the spiral microchannels straightforwardly and profoundly. After elucidating the inertial microfluidics and their governing physics in simple terms, we provide insights about spiral microchannels' mechanism and concepts, the secondary flow, the cross-section effects on the separation processes, and finally, the future applications and challenges of this kind of inertial microfluidics. The investigations reveal that new approaches should be conducted to use the spiral microchannels with combined cross-sections. These kinds of microchannels with optimum size and shape of cross-sections can improve the performance efficiently.


2007 ◽  
Vol 58 (13) ◽  
pp. 3719-3730 ◽  
Author(s):  
Zinnia H. González-Carranza ◽  
Katherine A. Elliott ◽  
Jeremy A. Roberts

Plants ◽  
2019 ◽  
Vol 8 (7) ◽  
pp. 225 ◽  
Author(s):  
Chun-Lin Shi ◽  
Renate Marie Alling ◽  
Marta Hammerstad ◽  
Reidunn B. Aalen

Plants both generate and shed organs throughout their lifetime. Cell separation is in function during opening of anthers to release pollen; floral organs are detached after pollination when they have served their purpose; unfertilized flowers are shed; fruits and seeds are abscised from the mother plant to secure the propagation of new generations. Organ abscission takes place in specialized abscission zone (AZ) cells where the middle lamella between adjacent cell files is broken down. The plant hormone ethylene has a well-documented promoting effect on abscission, but mutation in ethylene receptor genes in Arabidopsis thaliana only delays the abscission process. Microarray and RNA sequencing have identified a large number of genes differentially expressed in the AZs, especially genes encoding enzymes involved in cell wall remodelling and disassembly. Mutations in such genes rarely give a phenotype, most likely due to functional redundancy. In contrast, mutation in the INFLORESCENCE DEFICIENT IN ABSCISSION (IDA) blocks floral organ abscission in Arabidopsis. IDA encodes a small peptide that signals through the leucine-rich repeat receptor-like kinases HAESA (HAE) and HAE-LIKE2 (HSL2) to control floral organ abscission and facilitate lateral root emergence. Untimely abscission is a severe problem in many crops, and in a more applied perspective, it is of interest to investigate whether IDA-HAE/HSL2 is involved in other cell separation processes and other species. Genes encoding IDA and HSL2 orthologues have been identified in all orders of flowering plants. Angiosperms have had enormous success, with species adapted to all kinds of environments, adaptations which include variation with respect to which organs they shed. Here we review, from an evolutionary perspective, the properties of the IDA-HAE/HSL2 signaling module and the evidence for its hypothesized involvement in various cell separation processes in angiosperms.


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