scholarly journals First Report of Charcoal Rot (Macrophomina phaseolina) on Soybean in Minnesota

Plant Disease ◽  
2003 ◽  
Vol 87 (2) ◽  
pp. 202-202 ◽  
Author(s):  
M. E. ElAraby ◽  
J. E. Kurle ◽  
S. R. Stetina

In August 1999, soybean (Glycine max (L.) Merr.) plants exhibiting symptoms of charcoal rot were observed near Zumbrota, MN. Symptoms included shrunken, unfilled pods, and brown, wilted leaves attached to dead petioles and stems (1). When stems of symptomatic soybean plants were split, areas of gray-to-black discoloration where present in the stem cortex (1). Black, spherical microsclerotia 77 to 90 µm in diameter and elongated microsclerotia 77 to 120 µm long (1) were found in vascular tissue. Stem tissue placed on potato dextrose agar (PDA) yielded fungal colonies identified as Macrophomina phaseolina (Tassi) Goid. based on gray colony color, colony morphology, and the presence of microsclerotia 70 to 90 µm in diameter. In 2000, M. phaseolina was isolated from plant samples gathered from 11 of 90 fields sampled in a statewide soybean disease survey. More studies are needed to determine the distribution of charcoal rot in Minnesota; however, the occurrence of symptoms at one location and the presence of M. phaseolina in soybean-growing areas of Minnesota suggest that charcoal rot may occur in susceptible soybean cultivars under favorable environmental conditions. Reference: (1) G. S. Smith and T. D. Wyllie. Charcoal rot. Pages 29–30 in: Compendium of Soybean Diseases, 4th ed. G. L. Hartmann, J. B. Sinclair, and J. C. Rupe, eds. The American Phytopathological Society, St. Paul, MN, 1999.

Plant Disease ◽  
2003 ◽  
Vol 87 (5) ◽  
pp. 601-601 ◽  
Author(s):  
C. A. Bradley ◽  
L. E. del Río

In late August 2002, patches of soybean (Glycine max) plants in a field in Richland County, ND exhibited symptoms and signs of charcoal rot and died prematurely. Dead plants had a silvery-gray appearance, and black microsclerotia (76 ± 28 μm in diameter) were present in the vascular tissue of the lower stems and roots. Stem tissue was placed in petri dishes containing potato dextrose agar (PDA). Gray hyphae grew from the stem tissue and subsequently turned black and formed microsclerotia (188 × 139 ± 48 μm). The fungus was identified as Macrophomina phaseolina (Tassi) Goid. based on colony color and morphology and size of the microsclerotia (1). To confirm pathogenicity, soybean plants (cv. Garst D 041 RR) were grown in the greenhouse and inoculated with the previously obtained isolate of M. phaseolina. Stems of soybean plants at the V2 stage were excised just below the third node. Mycelia plugs of a 1-week-old culture of M. phaseolina were placed into the large end of disposable micropipette tips (200 μl). The micropipette tips containing the M. phaseolina culture were subsequently placed over 10 excised soybean stems. To serve as a control, 10 excised soybean stems were inoculated with micropipette tips containing plugs of noninfested PDA. Thirty days after inoculation, micropipette tips were removed, and lesions that had developed on the stem were measured. The mean lesion length of M. phaseolina inoculated stems was 7 mm; no lesions developed on the control plants. M. phaseolina was reisolated from infected tissue of inoculated plants that were placed on PDA. Charcoal rot was only observed in the Richland County field; however, no surveys were conducted to determine the prevalence of the disease throughout the soybean production area of North Dakota. Because it is now known that this disease occurs in North Dakota, growers, extension personnel, and crop consultants must scout for the disease and practice recommended management strategies. Reference: (1) G. S. Smith and T. D. Wyllie. Charcoal rot. Pages 29–31 in: Compendium of Soybean Diseases, 4th ed. G. L. Hartman, J. B. Sinclair, and J. C. Rupe, eds. The American Phytopathological Society, St. Paul, MN, 1999.


2020 ◽  
Vol 6 (4) ◽  
pp. 332
Author(s):  
Vivek H. Khambhati ◽  
Hamed K. Abbas ◽  
Michael Sulyok ◽  
Maria Tomaso-Peterson ◽  
W. Thomas Shier

Macrophomina phaseolina (Tassi) Goid., the causal agent of charcoal rot disease of soybean, is capable of causing disease in more than 500 other commercially important plants. This fungus produces several secondary metabolites in culture, including (-)-botryodiplodin, phaseolinone and mellein. Given that independent fungal isolates may differ in mycotoxin and secondary metabolite production, we examined a collection of 89 independent M. phaseolina isolates from soybean plants with charcoal rot disease using LC-MS/MS analysis of culture filtrates. In addition to (-)-botryodiplodin and mellein, four previously unreported metabolites were observed in >19% of cultures, including kojic acid (84.3% of cultures at 0.57–79.9 µg/L), moniliformin (61.8% of cultures at 0.011–12.9 µg/L), orsellinic acid (49.4% of cultures at 5.71–1960 µg/L) and cyclo[L-proline-L-tyrosine] (19.1% of cultures at 0.012–0.082 µg/L). In addition, nine previously unreported metabolites were observed at a substantially lower frequency (<5% of cultures), including cordycepin, emodin, endocrocin, citrinin, gliocladic acid, infectopyron, methylorsellinic acid, monocerin and N-benzoyl-L-phenylalanine. Further studies are needed to investigate the possible effects of these mycotoxins and metabolites on pathogenesis by M. phaseolina and on food and feed safety, if any of them contaminate the seeds of infected soybean plants.


Plant Disease ◽  
2005 ◽  
Vol 89 (5) ◽  
pp. 526-526 ◽  
Author(s):  
X. B. Yang ◽  
S. S. Navi

Macrophomina phaseolina, the causal agent of soybean charcoal rot, is widely present in soil and has been reported to cause yield losses of 30 to 50%, mainly in southern soybean production regions of the United States. (2). Charcoal rot was first reported in North Dakota during 2002, suggesting a range expansion for M. phaseolina (1). Charcoal rot has been occasionally observed in Iowa in individual soybean plants, but epidemics of the disease have not been recorded. During the 2003 growing season, a severe epidemic of charcoal rot was observed throughout the state. Diseased plants were first noticed in late July and by late August, patches of diseased plants wilted and died prematurely in many fields. The pith of diseased plants had a brown discoloration in taproots and lower stems. Symptoms were observed up to the 4th or 5th nodes, typical of charcoal rot. In some plants, no discoloration was evident. In discolored plants, microsclerotia of M. phaseolina were commonly observed in the epidermis, just beneath the epidermis, and inside taproots and lower stems of wilted plants. A systematic survey was conducted between late August and early September, 2003 to determine the prevalence and severity of charcoal rot in Iowa. The disease was observed in 60% of fields surveyed in northern Iowa (north of latitude 42.5°N), 90% in central Iowa (latitude 41.6 to 42.5°N), and 20% in southern Iowa (south of latitude 41.6°N). Incidence in surveyed fields ranged from 10 to 80%. One 80-ha field in Hampton (northern Iowa) had 50% disease incidence. An incidence of 80%, with extensive premature death prior to growth stage R6 (full seed), was observed in a 16-ha field east of Huxley (central Iowa). The fungus was isolated by splitting open the tap roots of a few representative symptomatic plants from 18 fields. Tissue colonized with microsclerotia of M. phaseolina was scraped, collected in sterile petri dishes, surface sterilized in 1% sodium hypochlorite, washed in distilled sterile water, and transferred to potato dextrose agar. The plates were incubated for 2 weeks at 22 ± 1°C on laboratory benches with a 12-h photoperiod. All resulting cultures produced abundant microscleorotia of M. phaseolina similar to those described by Smith and Wyllie (3). Pycnidia were observed in two cultures. August 2003 was the driest month on record in Iowa, which may have contributed to the outbreaks of this disease. Statewide, yield in Iowa soybean during 2003 was 1,976.1 kg/ha (2,798 kg/ha in 2002). The largescale epidemic of charcoal rot may have contributed to the overall reduction in soybean productivity in Iowa in 2003 (4). Since M. phaseolina also infects corn (2), and corn/soybean rotation is the most common cropping system in Iowa, efforts are needed to address the future risk of M. phaseolina to corn and soybean. References: (1) C. A. Bradley and L. E. del Rio. Plant Dis. 87:601, 2003. (2) D. C. McGee. Soybean Diseases: A Reference Source for Seed Technologists. The American Phytopathological Society, St. Paul, MN, 1992; (3) G. S. Smith and T. D. Wyllie. Charcoal rot. Pages 29–31 in: Compendium of Soybean Diseases. 4th ed. G. L. Hartman et al., eds. The American Phytopathological Society, St. Paul, MN, 1999. (4). X. B. Yang et al. Biology and management of soybean charcoal rot. Pages 55–60. in: Proc. 15th Integrated Crop Management Conf. Iowa State University, Ames. 2003.


Toxins ◽  
2020 ◽  
Vol 12 (1) ◽  
pp. 25 ◽  
Author(s):  
Hamed K. Abbas ◽  
Nacer Bellaloui ◽  
Alemah M. Butler ◽  
Justin L. Nelson ◽  
Mohamed Abou-Karam ◽  
...  

Toxins have been proposed to facilitate fungal root infection by creating regions of readily-penetrated necrotic tissue when applied externally to intact roots. Isolates of the charcoal rot disease fungus, Macrophomina phaseolina, from soybean plants in Mississippi produced a phytotoxic toxin, (−)-botryodiplodin, but no detectable phaseolinone, a toxin previously proposed to play a role in the root infection mechanism. This study was undertaken to determine if (−)-botryodiplodin induces toxic responses of the types that could facilitate root infection. (±)-Botryodiplodin prepared by chemical synthesis caused phytotoxic effects identical to those observed with (−)-botryodiplodin preparations from M. phaseolina culture filtrates, consistent with fungus-induced phytotoxicity being due to (−)-botryodiplodin, not phaseolinone or other unknown impurities. Soybean leaf disc cultures of Saline cultivar were more susceptible to (±)-botryodiplodin phytotoxicity than were cultures of two charcoal rot-resistant genotypes, DS97-84-1 and DT97-4290. (±)-Botryodiplodin caused similar phytotoxicity in actively growing duckweed (Lemna pausicostata) plantlet cultures, but at much lower concentrations. In soybean seedlings growing in hydroponic culture, (±)-botryodiplodin added to culture medium inhibited lateral and tap root growth, and caused loss of root caps and normal root tip cellular structure. Thus, botryodiplodin applied externally to undisturbed soybean roots induced phytotoxic responses of types expected to facilitate fungal root infection.


Toxins ◽  
2019 ◽  
Vol 11 (11) ◽  
pp. 645 ◽  
Author(s):  
Hamed K. Abbas ◽  
Nacer Bellaloui ◽  
Cesare Accinelli ◽  
James R. Smith ◽  
W. Thomas Shier

Charcoal rot disease, caused by the fungus Macrophomina phaseolina, results in major economic losses in soybean production in southern USA. M. phaseolina has been proposed to use the toxin (-)-botryodiplodin in its root infection mechanism to create a necrotic zone in root tissue through which fungal hyphae can readily enter the plant. The majority (51.4%) of M. phaseolina isolates from plants with charcoal rot disease produced a wide range of (-)-botryodiplodin concentrations in a culture medium (0.14–6.11 µg/mL), 37.8% produced traces below the limit of quantification (0.01 µg/mL), and 10.8% produced no detectable (-)-botryodiplodin. Some culture media with traces or no (-)-botryodiplodin were nevertheless strongly phytotoxic in soybean leaf disc cultures, consistent with the production of another unidentified toxin(s). Widely ranging (-)-botryodiplodin levels (traces to 3.14 µg/g) were also observed in the roots, but not in the aerial parts, of soybean plants naturally infected with charcoal rot disease. This is the first report of (-)-botryodiplodin in plant tissues naturally infected with charcoal rot disease. No phaseolinone was detected in M. phaseolina culture media or naturally infected soybean tissues. These results are consistent with (-)-botryodiplodin playing a role in the pathology of some, but not all, M. phaseolina isolates from soybeans with charcoal rot disease in southern USA.


Plant Disease ◽  
2006 ◽  
Vol 90 (4) ◽  
pp. 524-524 ◽  
Author(s):  
S. A. Gaetán ◽  
L. Fernandez ◽  
M. Madia

Canola (Brassica napus) is an important oleaginous crop in Argentina. Approximately 16,000 ha are grown commercially in the southern region of Buenos Aires Province. In 2003, typical symptoms and signs of charcoal rot were observed on canola plants in experimental plots located at the School of Agricultural Sciences, University of Buenos Aires in Buenos Aires. Average disease incidence across three 5- to 6-month-old plants (cvs. Monty, Rivette, and Trooper) was 12% (range = 7 to 17%). Affected plants appeared in patches following the rows at pod-filling stage. Symptoms included wilted foliage, premature senescence, and death of plants. Black, spherical microsclerotia 78 to 95 μm in diameter were present in vascular tissue of basal stems and taproots. The affected plants were stunted and had unfilled pods. In advanced phases of the disease, areas of silver gray-to-black discoloration were observed in the stem cortex; many plants were killed during late-grain fill, and plants could be pulled easily from the ground because basal stems were shredded. Four samples consisting of five symptomatic plants per sample were randomly collected from experimental plots. Pieces (1-cm long) taken from taproots and basal stems of diseased plants were surface sterilized with 1% NaOCl for 2 min and then placed on potato dextrose agar (PDA). Plates were incubated in the dark at 26°C for 4 days and then exposed to 12-h NUV light/12-h dark for 6 days. Five resulting isolates were identified as Macrophomina phaseolina (Tassi) Goidanich (1) based on the gray color of the colony and the presence of microsclerotia 71 to 94 μm in diameter. Two colonies developed globose pycnidia with one-celled, hyaline, and elliptic conidia. Pathogenicity tests were conducted using four inoculated and three non-inoculated control plants potted in a sterilized soil mix (soil/sand, 3:1) in a greenhouse at 25°C and 75% relative humidity with no supplemental light. Crown inoculations were carried out by placing a disk taken from an actively growing culture of M. phaseolina into wounds made with a sterile scalpel. Control plants received disks of sterile PDA. Inoculated and control plants were covered with polyethylene bags for 48 h after inoculation. Three isolates caused disease on 7-week-old canola plants (cvs. Master, Mistral, Rivette, and Trooper). Characteristic symptoms similar to the original observations developed for all three isolates within 21 days after inoculation on 80% of inoculated plants. The pathogen was successfully reisolated from diseased stem tissue in all instances. Symptoms included leaf necrosis, stunting, decay and collapse of seedlings, and plant death. Control plants remained asymptomatic. The experiment was repeated once with similar results. To our knowledge, this is the first report of the occurrence of M. phaseolina causing charcoal rot on canola in Argentina. This pathogen has been previously reported in the United States (2,3). The results demonstrate the potential importance of this pathogen in Argentina, since two commercial cultivars (Master and Mistral) were apparently susceptible to M. phaseolina. More studies are needed to determine the presence of charcoal rot in canola-growing areas of Argentina. References: (1) Anonymous. Macrophomina phaseolina. No. 275 in: Descriptions of Plant Pathogenic Fungi and Bacteria. CMI, Kew, Surrey, UK, 1970. (2) R. E. Baird et al. Plant Dis. 78:316, 1994. (3) D. F. Farr et al. Fungi on Plants and Plant Products in the United States. The American Phytopathological Society, St. Paul, MN, 1989.


Plant Disease ◽  
2011 ◽  
Vol 95 (10) ◽  
pp. 1318-1318 ◽  
Author(s):  
J. D. Weems ◽  
S. A. Ebelhar ◽  
V. Chapara ◽  
D. K. Pedersen ◽  
G. R. Zhang ◽  
...  

In September 2009, sunflower (Helianthus annuus L.) plants (cv. Mycogen 8C451) from a University of Illinois field research trial in Fayette County, Illinois exhibited silvery gray girdling lesions on the lower stems and premature death. When lower stems and roots were split open, the pith tissue was compressed into layers. Black microsclerotia (90 to 180 μm) were present on the outside of the lower stem tissue and in the stem vascular tissue. Five pieces (approximately 1 cm long) of symptomatic stem tissue from five different affected plants (25 pieces total) were soaked in a 0.5% solution of NaOCl for 30 s, rinsed with sterile distilled water, and placed on potato dextrose agar (PDA; Becton, Dickinson, and Company, Franklin Lakes, NJ). Gray hyphae grew from all of the stem pieces, which subsequently turned black and formed black microsclerotia (75 to 175 μm). On the basis of plant symptoms and size and color of the microsclerotia, the disease was diagnosed as charcoal rot caused by Macrophomina phaseolina (Tassi) Goid (2). To confirm that the isolated fungus was M. phaseolina, DNA was extracted from the pure culture, and PCR amplification of a subunit rDNA and internal transcribed spacer (ITS) region with primers EF3RCNL and ITS4 was performed (3). The Keck Biotechnology Center at the University of Illinois, Urbana sequenced the PCR product. The resulting nucleotide sequence shared the highest homology (99%) with sequences of M. phaseolina when compared with the subunit rDNA and ITS sequences in the nucleotide database ( http://www.ncbi.nlm.nih.gov ). A greenhouse experiment was conducted to confirm pathogenicity; the greenhouse temperature was approximately 27°C and sunflower plants (cv. Cargill 270) were grown in pots and watered daily to maintain adequate soil moisture for growth. Sterile toothpicks were infested with M. phaseolina and placed through the stems (10 cm above the soil surface) of five 40-day-old sunflower plants that were approximately at growth stage R4 (1,4). Five sterile, noninfested toothpicks were similarly placed through sunflower plants to act as controls. Parafilm was used to hold the toothpick in the stem and seal the stem injury. Thirty-five days after inoculation, the mean lesion length on stems inoculated with M. phaseolina was 595 mm and no lesions developed on the control plants. M. phaseolina-inoculated plants also began to wilt and die. Cultures identical to the original M. phaseolina isolate were reisolated from stem lesions of the M. phaseolina-inoculated plants. This is the first report of charcoal rot on sunflower in Illinois to our knowledge. Sunflower is currently not a major crop grown in Illinois, but on-going research is focused on evaluating sunflower as a potential late-planted crop to follow winter wheat. If sunflower production increases in Illinois, growers may need to take precautions to manage charcoal rot. References: (1) L. K. Edmunds. Phytopathology 54:514, 1964. (2) T. Gulya et al. Page 263 in: Sunflower Technology and Production. American Society of Agronomy, Madison, WI, 1997. (3) N. S. Lord et al. FEMS Microbiol. Ecol. 42:327, 2002. (4) A. A. Schneiter and J. F. Miller. Crop Sci. 21:901, 1981.


Plant Disease ◽  
2005 ◽  
Vol 89 (4) ◽  
pp. 434-434 ◽  
Author(s):  
J. Mertely ◽  
T. Seijo ◽  
N. Peres

Strawberry (Fragaria × ananassa Duchesne) is produced as an annual winter crop in raised, plastic-mulched beds on 2,800 ha in west central Florida. In December 2001, a grower submitted collapsed and dying strawberry plants from a commercial field to the University of Florida in Dover. The cut crowns of affected plants revealed dark brown necrotic areas on the margins and along the woody vascular ring. Macrophomina phaseolina was isolated from pieces of infected tissue cut aseptically from the crowns and placed on a medium containing 12 g of Difco potato dextrose broth, 17 g of Bacto agar, 250 mg of ampicillin, and 100 mg of streptomycin sulfate per liter of water. The fungus produced numerous, dark, oblong sclerotia in the isolation medium after 4 to 5 days incubation at 24°C under constant fluorescent lighting. In 10-day-old cultures, sclerotia ranged in size from 55 to 190 μm long by 50 to 135 μm wide (average 105 × 74 μm). Ostiolate pycnidia bearing relatively large, broadly ellipsoidal, hyaline conidia occasionally developed on the host tissue after 8 to 10 days of incubation (2). During the 2003-2004 season, M. phaseolina was isolated from dying strawberry plants taken from the original field and two additional farms. Affected plants were often found along field margins or other areas inadequately fumigated with methyl bromide. Two single-spore isolates from different fields were tested for pathogenicity on nursery runner plants (cv. Strawberry Festival) grown for 4 weeks in the greenhouse on artificial potting soil. The fungal isolates were grown on corn meal agar at 24°C for 4 days and allowed to colonize sterile wooden toothpicks placed on the medium for an additional 5 days. Prior to use, the toothpicks were sterilized by autoclaving twice in deionized water and a third time in V8 juice. Six plants were inoculated with each isolate by inserting a colonized toothpick into each crown. Sterile, V8-infused toothpicks were inserted into the crowns of corresponding control plants. The plants were incubated in a greenhouse in a randomized complete block design with two replicates of three plants each. After 3 days, 33 to 100% of the inoculated plants developed wilting in one or more leaves. All inoculated plants collapsed or died within 2 weeks of inoculation, while the control plants remained healthy during the observation period. The pathogen was readily reisolated from inoculated plants. Charcoal rot disease caused by M. phaseolina has been reported on strawberry in France, India, and Illinois (2,3). To our knowledge, this is the first report from Florida. M. phaseolina may be an emerging threat as the Florida strawberry industry transitions from methyl bromide to other fumigants in 2005. References: (1) J. Maas. Macrophomina leaf blight and dry crown rot. Page 26 in: Compendium of Strawberry Diseases. 2nd ed. J. L. Maas, ed. The American Phytopathological Society, St. Paul, MN, 1998. (2) G. S. Smith and T. D. Wyllie. Charcoal rot. Pages 29–31 in: Compendium of Soybean Diseases. G. L. Hartman et al., eds. 4th ed. The American Phytopathological Society, St. Paul, MN. 1999. (3) B. Tweedy et al. Plant Dis. Rep. 42:107, 1958.


Author(s):  
Dr. Nanda Ashwin ◽  
Uday Kumar Adusumilli ◽  
Kemparaju N ◽  
Lakshmi Kurra

In this paper, an analysis of several machine learning and prediction techniques was conducted on 2,000 infected and healthy soybean plants to assess how these techniques can predict charcoal rot diseases. It is critical for agriculture to prevent the spread of disease by predicting pathogen infestations in advance. There are several causes of charcoal rot and among them are Macrophomina phaseolina (Tassi) Goid significantly lowers the productivity of the plants. Soybeans are at risk of a serious disease called charcoal rot. Traditional methods of disease prediction in soybeans are very time-consuming and not practical. There has been substantial interest in Machine Learning (ML) techniques across a variety of domains in recent years. Plant diseases can be detected by ML methods, even before symptoms appear fully. Inputs to ML models are a set of morphological and physiological features. Almost all of the machine learning models that have been developed achieved an accuracy of more than 90%. Among the methods used in this study, Graded Tree Boosting (GBT) achieved the best performance regarding sensitivity and specificity, with scores of 96.25 and 97.33% respectively. Based on our results, we were able to demonstrate that ML, specifically GBT, can be a successful tool for predicting the incidence of charcoal rot in real world situations. We also illustrated how it is crucial to incorporate physiological features into the learning process in order to ensure a successful outcome.


Author(s):  
Alemu Mengistu ◽  
Nacer Belleloui ◽  
Prakash R. Arelli

Two infectious root diseases that cause significant yield losses worldwide in soybean [Glycine max (L.) Merr.] are charcoal rot caused by Macrophomina phaseolina (Tassi) Goid. and the soybean cyst nematode, caused by Heterodera glycines Ichinohe. The objective of this research was to evaluate resistance to charcoal rot in a set of 120 soybean accessions reported to have resistance to one or more races of soybean cyst nematode so that lines with combined resistance could be identified. These accessions were screened in infested field in 2006 and 2007. Charcoal rot severity ranged from 1 to 5, where 1 is resistant and 5 susceptible. The result showed that out of the 120 soybean accessions tested for charcoal rot resistance 12 were identified to have moderate levels of resistance, 51 had moderate susceptibility, and 60 were susceptible. Furthermore, the accessions with moderate resistance to charcoal rot had resistance for one to two races of soybean cyst nematode. Within the lines identified with moderate resistance to charcoal rot, nine had a yellow seed coat, a desirable agronomic trait. These lines can be used as parents in soybean breeding programs for developing soybean cultivars with combined resistance to both charcoal rot and soybean cyst nematode.


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