scholarly journals Complete genome sequence resources for the onion pathogen, Pantoea ananatis OC5a

2021 ◽  
Author(s):  
Jo Ann E. Asselin ◽  
Jean M Bonasera ◽  
Tyler C. Helmann ◽  
Steven V. Beer ◽  
Paul Stodghill
Keyword(s):  
New York ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Onion Bulb ◽  
High Fidelity ◽  
High Quality ◽  
Pantoea Ananatis

Here we report on the genomic sequence and annotation for Pantoea ananatis OC5a, a strain that was isolated from an onion bulb grown in New York and that is pathogenic to onions, causing center rot of onion. OC5a is the first P. ananatis strain pathogenic to onions from New York to be completely assembled and sequenced. Having been assembled using long PacBio reads and high-fidelity Illumina reads, this genome is closed, complete, and of high-quality.

scholarly journals Complete Genome Sequence of a Vampire Bat Rabies Virus from French Guiana

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Anne Lavergne ◽  
Edith Darcissac ◽  
Hervé Bourhy ◽  
Sourakhata Tirera ◽  
Benoît de Thoisy ◽  
...  
Keyword(s):  
Rabies Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
French Guiana ◽  
Genomic Sequence ◽  
Amazon Region ◽  
Desmodus Rotundus ◽  
Bat Rabies ◽  
Vampire Bat

A rabies virus was detected in a common vampire bat ( Desmodus rotundus ) in French Guiana. Its genomic sequence was obtained and found to be closely related to other hematophagous bat-related viruses that widely circulate in the northern Amazon region. This virus is named AT6.

scholarly journals Complete High-Quality Genome Sequence of Clostridium limosum (Hathewaya limosa) Isolate 14S0207, Recovered from a Cow with Suspected Blackleg in Germany

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Prasad Thomas ◽  
Mostafa Y. Abdel-Glil ◽  
Anne Busch ◽  
Lothar H. Wieler ◽  
Inga Eichhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Intestinal Tract ◽  
High Quality ◽  
Circular Chromosome ◽  
Content Type ◽  
High Quality Genome

Clostridium limosum can be found in soil and the intestinal tract of animals. In 2014, C. limosum was isolated from a suspected blackleg outbreak in cattle in Schleswig-Holstein, Germany. We present a complete genome sequence of a C. limosum strain represented by a circular chromosome and three plasmids.

scholarly journals The Complete Genome Sequence of Escherichia coli EC958: A High Quality Reference Sequence for the Globally Disseminated Multidrug Resistant E. coli O25b:H4-ST131 Clone

PLoS ONE ◽  
2014 ◽  
Vol 9 (8) ◽  
pp. e104400 ◽  
Author(s):  
Brian M. Forde ◽  
Nouri L. Ben Zakour ◽  
Mitchell Stanton-Cook ◽  
Minh-Duy Phan ◽  
Makrina Totsika ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Multidrug Resistant ◽  
Reference Sequence ◽  
High Quality ◽  
E Coli ◽  
St131 Clone

scholarly journals Whole-Genome Sequences of Two Closely Related Bacteria, Actinomyces sp. Strain Chiba101 and Actinomyces denticolens DSM 20671T

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Yu Kanesaki ◽  
Taichiro Ishige ◽  
Yuriko Sekigawa ◽  
Tomoko Kobayashi ◽  
Yasushi Torii ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Genome Sequences ◽  
High Quality ◽  
Content Type

ABSTRACT Actinomyces sp. strain Chiba101, isolated from an arthritic leg joint of a pig raised in Japan, is a bacterium closely related to Actinomyces denticolens. Here, we deciphered the complete genome sequence of Actinomyces sp. Chiba101 and the high-quality draft genome sequence of A. denticolens DSM 20671T.

scholarly journals Complete Genome Sequence of Potato Virus T from Bolivia, Obtained from a 33-Year-Old Sample

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Ian P. Adams ◽  
Jorge Abad ◽  
Cesar E. Fribourg ◽  
Neil Boonham ◽  
Roger A. C. Jones
Keyword(s):  
Genome Sequence ◽  
Potato Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Potato Sample ◽  
Type Isolate ◽  
Andean Potato ◽  
Complete Genomic

We present the complete genomic sequence of a Potato virus T (PVT) isolate originally obtained from a Bolivian potato sample collected in 1976, and we compare it with the genome of the PVT type isolate from Peru. There is an 81% nucleotide identity between the two genomes of this Andean potato virus.

scholarly journals Complete Genome Sequence of Bacillus subtilis Strain DKU_NT_03, Isolated from a Traditional Korean Food Using Soybean (Chung-gook-jang) for High-Quality Nattokinase Activity

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Hee-Won Jeong ◽  
Man-Seok Bang ◽  
Yea-jin Lee ◽  
Su Ji Lee ◽  
Sang-Cheol Lee ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Factors ◽  
Subtilis Strain ◽  
High Quality ◽  
Content Type ◽  
Korean Food

ABSTRACT We present here the complete genome sequence of Bacillus subtilis strain DKU_NT_03 isolated from the traditional Korean food chung-gook-jang, which is made from soybeans. This strain was chosen to identify genetic factors with high-quality nattokinase activity.

scholarly journals Genomic sequence of yellow fever virus from a Dutch traveller returning from the Gambia-Senegal region, the Netherlands, November 2018

2019 ◽  
Vol 24 (4) ◽  
Author(s):  
My VT Phan ◽  
Sarwa Darwish Murad ◽  
Annemiek A van der Eijk ◽  
Herold J. Metselaar ◽  
Hermien Hartog ◽  
...  
Keyword(s):  
The Netherlands ◽  
Yellow Fever ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Yellow Fever Virus ◽  
Genomic Sequence ◽  
Public Awareness ◽  
The Gambia ◽  
Fever Virus

In November 2018, yellow fever was diagnosed in a Dutch traveller returning from a bicycle tour in the Gambia-Senegal region. A complete genome sequence of yellow fever virus (YFV) from the case was generated and clustered phylogenetically with YFV from the Gambia and Senegal, ruling out importation into the Netherlands from recent outbreaks in Brazil or Angola. We emphasise the need for increased public awareness of YFV vaccination before travelling to endemic countries.

scholarly journals Complete Genome Sequence of Bacillus subtilis Strain DKU_NT_02, Isolated from Traditional Korean Food Using Soybean (Chung-gook-jang) for High-Quality Poly-γ-Glutamic Acid Activity

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-jin Lee ◽  
Su Ji Lee ◽  
Sang-Cheol Lee ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Glutamic Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Factors ◽  
Subtilis Strain ◽  
High Quality ◽  
Content Type ◽  
Korean Food

The complete genome sequence of Bacillus subtilis strain DKU_NT_02, isolated from traditional Korean food using soybeans (chung-gook-jang), is presented here. This strain was chosen to help identify genetic factors with high-quality poly-γ-glutamic acid (γPGA) activity.

scholarly journals Complete Genome Sequence of Clinical Isolate Pantoea ananatis LMG 5342

2012 ◽  
Vol 194 (6) ◽  
pp. 1615-1616 ◽  
Author(s):  
P. De Maayer ◽  
W. Y. Chan ◽  
F. Rezzonico ◽  
A. Buhlmann ◽  
S. N. Venter ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pantoea Ananatis

scholarly journals The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential

2011 ◽  
Vol 93 (1) ◽  
pp. 331-341 ◽  
Author(s):  
Yoshihiko Hara ◽  
Naoki Kadotani ◽  
Hiroshi Izui ◽  
Joanna I. Katashkina ◽  
Tatiana M. Kuvaeva ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pantoea Ananatis ◽  
Biotechnological Potential
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