scholarly journals Taxonomic identification bias does not drive patterns of abundance and diversity in theropod dinosaurs

2021 ◽  
Vol 17 (7) ◽  
pp. 20210168
Author(s):  
Daniel D. Cashmore ◽  
Richard J. Butler ◽  
Susannah C. R. Maidment
Keyword(s):  
Fossil Record ◽  
Species Abundance ◽  
Morphological Data ◽  
Taxonomic Identification ◽  
Fossil Species ◽  
Theropod Dinosaurs ◽  
Bone Preservation ◽  
Abundance And Diversity ◽  
Fossil Preservation ◽  
Vertebrate Skeleton

The ability of palaeontologists to correctly diagnose and classify new fossil species from incomplete morphological data is fundamental to our understanding of evolution. Different parts of the vertebrate skeleton have different likelihoods of fossil preservation and varying amounts of taxonomic information, which could bias our interpretations of fossil material. Substantial previous research has focused on the diversity and macroevolution of non-avian theropod dinosaurs. Theropods provide a rich dataset for analysis of the interactions between taxonomic diagnosability and fossil preservation. We use specimen data and formal taxonomic diagnoses to create a new metric, the Likelihood of Diagnosis, which quantifies the diagnostic likelihood of fossil species in relation to bone preservation potential. We use this to assess whether a taxonomic identification bias impacts the non-avian theropod fossil record. We find that the patterns of differential species abundance and clade diversity are not a consequence of their relative diagnosability. Although there are other factors that bias the theropod fossil record that are not investigated here, our results suggest that patterns of relative abundance and diversity for theropods might be more representative of Mesozoic ecology than often considered.

Paleometry as a key tool to deal with paleobiological and astrobiological issues: some contributions and reflections on the Brazilian fossil record

2019 ◽  
Vol 18 (6) ◽  
pp. 575-589 ◽  
Author(s):  
Amanda L. S. Gomes ◽  
Bruno Becker-Kerber ◽  
Gabriel L. Osés ◽  
Gustavo Prado ◽  
Pedro Becker Kerber ◽  
...  
Keyword(s):  
Fossil Record ◽  
Microbial Mats ◽  
Fish Bone ◽  
Common Interest ◽  
Cross Point ◽  
Origin And Evolution ◽  
Evolution Of Life ◽  
Bone Preservation ◽  
Fossil Preservation ◽  
Non Destructive

AbstractInvestigations into the existence of life in other parts of the cosmos find strong parallels with studies of the origin and evolution of life on our own planet. In this way, astrobiology and paleobiology are married by their common interest in disentangling the interconnections between life and the surrounding environment. In this way, a cross-point of both sciences is paleometry, which involves a myriad of imaging and geochemical techniques, usually non-destructive, applied to the investigation of the fossil record. In the last decades, paleometry has benefited from an unprecedented technological improvement, thus solving old questions and raising new ones. This advance has been paralleled by conceptual approaches and discoveries fuelled by technological evolution in astrobiological research. In this context, we present some new data and review recent advances on the employment of paleometry to investigations on paleobiology and astrobiology in Brazil in areas such biosignatures in Ediacaran microbial mats, biogenicity tests on enigmatic Ediacaran structures, research on Ediacaran metazoan biomineralization, fossil preservation in Cretaceous insects and fish, and finally the experimental study on the decay of fish to test the effect of distinct types of sediment on soft-tissue preservation, as well as the effects of early diagenesis on fish bone preservation.

Patterns in diversity and composition of the microbenthos of subarctic intertidal beaches with different morphodynamics

2020 ◽  
Vol 648 ◽  
pp. 19-38
Author(s):  
AI Azovsky ◽  
YA Mazei ◽  
MA Saburova ◽  
PV Sapozhnikov
Keyword(s):  
Species Abundance ◽  
Abundance Ratio ◽  
Wave Action ◽  
Coarse Grained ◽  
Sediment Properties ◽  
Β Diversity ◽  
Α Diversity ◽  
Wide Range ◽  
Similar Mode ◽  
Abundance And Diversity

Diversity and composition of benthic diatom algae and ciliates were studied at several beaches along the White and Barents seas: from highly exposed, reflective beaches with coarse-grained sands to sheltered, dissipative silty-sandy flats. For diatoms, the epipelic to epipsammic species abundance ratio was significantly correlated with the beach index and mean particle size, while neither α-diversity measures nor mean cell length were related to beach properties. In contrast, most of the characteristics of ciliate assemblages (diversity, total abundance and biomass, mean individual weight and percentage of karyorelictids) demonstrated a strong correlation to beach properties, remaining low at exposed beaches but increasing sharply in more sheltered conditions. β-diversity did not correlate with beach properties for either diatoms or ciliates. We suggest that wave action and sediment properties are the main drivers controlling the diversity and composition of the intertidal microbenthos. Diatoms and ciliates, however, demonstrated divergent response to these factors. Epipelic and epipsammic diatoms exhibited 2 different strategies to adapt to their environments and therefore were complementarily distributed along the environmental gradient and compensated for each other in diversity. Most ciliates demonstrated a similar mode of habitat selection but differed in their degree of tolerance. Euryporal (including mesoporal) species were relatively tolerant to wave action and therefore occurred under a wide range of beach conditions, though their abundance and diversity were highest in fine, relatively stable sediments on sheltered beaches, whereas the specific interstitial (i.e. genuine microporal) species were mostly restricted to only these habitats.

The wing venation of a new fossil species, reconstructed using geometric morphometrics, adds to the rare fossil record of Triassic Gondwanian Odonata

2021 ◽  
Vol 63 ◽  
pp. 101056
Author(s):  
Isabelle Deregnaucourt ◽  
Jérémie Bardin ◽  
John M. Anderson ◽  
Olivier Béthoux
Keyword(s):  
Geometric Morphometrics ◽  
Fossil Record ◽  
Wing Venation ◽  
Fossil Species

Three new cribrimorph bryozoans (order Cheilostomatida) from the early Miocene of Argentina, with a discussion on spinocystal shield morphologies

2021 ◽  
pp. 1-15
Author(s):  
Juan López-Gappa ◽  
Leandro M. Pérez ◽  
Ana C.S. Almeida ◽  
Débora Iturra ◽  
Dennis P. Gordon ◽  
...  
Keyword(s):  
Type Species ◽  
Systematic Position ◽  
Early Miocene ◽  
Morphological Data ◽  
Fossil Species ◽  
Extant Species ◽  
The Family ◽  
Subjective Synonym

Abstract Bryozoans with calcified frontal shields formed by the fusion of costae, collectively constituting a spinocyst, are traditionally assigned to the family Cribrilinidae. Today, this family is regarded as nonmonophyletic. In the Argentine Cenozoic, cribrilinids were until recently represented by only two fossil species from the Paleocene of Patagonia. This study describes the first fossil representatives of Jolietina and Parafigularia: J. victoria n. sp. and P. pigafettai n. sp., respectively. A fossil species of Figularia, F. elcanoi n. sp., is also described. The material comes from the early Miocene of the Monte León and Chenque formations (Patagonia, Argentina). For comparison, we also provide redescriptions of the remaining extant species of Jolietina: J. latimarginata (Busk, 1884) and J. pulchra Canu and Bassler, 1928a. The systematic position of some species previously assigned to Figularia is here discussed. Costafigularia n. gen. is erected, with Figularia pulcherrima Tilbrook, Hayward, and Gordon, 2001 as type species. Two species previously assigned to Figularia are here transferred to Costafigularia, resulting in C. jucunda n. comb. and C. tahitiensis n. comb. One species of Figularia is reassigned to Vitrimurella, resulting in V. ampla n. comb. The family Vitrimurellidae is here reassigned to the superfamily Cribrilinoidea. The subgenus Juxtacribrilina is elevated to genus rank. Inferusia is regarded as a subjective synonym of Parafigularia. Parafigularia darwini Moyano, 2011 is synonymized with I. taylori Kuklinski and Barnes, 2009, resulting in Parafigularia taylori n. comb. Morphological data suggest that these genera comprise different lineages, and a discussion on the disparities among cribrilinid (sensu lato) spinocysts is provided. UUID: http://zoobank.org/215957d3-064b-47e2-9090-d0309f6c9cd8

scholarly journals Two new long-rostrum cranefly species from the Cretaceous Iberian amber (Diptera, Limoniidae, Helius)

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Iwona Kania-Kłosok ◽  
Wiesław Krzemiński ◽  
Antonio Arillo
Keyword(s):  
Environmental Conditions ◽  
Lower Cretaceous ◽  
Fossil Record ◽  
First Record ◽  
Northern Spain ◽  
Fossil Species ◽  
Body Morphology ◽  
Cretaceous Period ◽  
Basque Cantabrian Basin

AbstractFirst record of the genus Helius—long-rostrum cranefly from Maestrazgo Basin (eastern Spain, Iberian Penisula) is documented. Two new fossil species of the genus Helius are described from Cretaceous Spanish amber and compared with other species of the genus known from fossil record with particular references to these known from Cretaceous period. Helius turolensis sp. nov. is described from San Just amber (Lower Cretaceous, upper Albian) Maestrazgo Basin, eastern Spain, and Helius hispanicus sp. nov. is described from Álava amber (Lower Cretaceous, upper Albian), Basque-Cantabrian Basin, northern Spain. The specific body morphology of representatives of the genus Helius preserved in Spanish amber was discussed in relation to the environmental conditions of the Maestrazgo Basin and Basque-Cantabrian Basin in Cretaceous.

Influence of phylogeny on the estimation of diet from dental morphology in the Carnivora

Paleobiology ◽  
2021 ◽  
pp. 1-16
Author(s):  
Samantha S. B. Hopkins ◽  
Samantha A. Price ◽  
Alec J. Chiono
Keyword(s):  
Evolutionary History ◽  
Morphological Data ◽  
Evolutionary Constraints ◽  
Dental Morphology ◽  
Tooth Shape ◽  
Fossil Mammals ◽  
Phylogenetic Constraints ◽  
Substantial Error ◽  
Evolutionary Tempo And Mode ◽  
Vertebrate Skeleton

Abstract Because teeth are the most easily preserved part of the vertebrate skeleton and are particularly morphologically variable in mammals, studies of fossil mammals rely heavily on dental morphology. Dental morphology is used both for systematics and phylogeny as well as for inferences about paleoecology, diet in particular. We analyze the influence of evolutionary history on our ability to reconstruct diet from dental morphology in the mammalian order Carnivora, and we find that much of our understanding of diet in carnivorans is dependent on the phylogenetic constraints on diet in this clade. Substantial error in estimating diet from dental morphology is present regardless of the morphological data used to make the inference, although more extensive morphological datasets are more accurate in predicting diet than more limited character sets. Unfortunately, including phylogeny in making dietary inferences actually decreases the accuracy of these predictions, showing that dietary predictions from morphology are substantially dependent on the evolutionary constraints on carnivore diet and tooth shape. The “evolutionary ratchet” that drives lineages of carnivorans to evolve greater degrees of hypercarnivory through time actually plays a role in allowing dietary inference from tooth shape, but consequently requires caution in interpreting dietary inference from the teeth fossil carnivores. These difficulties are another reminder of the differences in evolutionary tempo and mode between morphology and ecology.

New Zealand sub-Antarctic phytoliths and their potential for past vegetation reconstruction

2007 ◽  
Vol 20 (1) ◽  
pp. 21-32 ◽  
Author(s):  
Vanessa C. Thorn
Keyword(s):  
New Zealand ◽  
Organic Material ◽  
Fossil Record ◽  
Ecosystem Development ◽  
Grassland Ecosystem ◽  
Vegetation Reconstruction ◽  
Geological Past ◽  
Abundance And Diversity ◽  
Study Sites ◽  
Campbell Island

AbstractPhytoliths in the modern vegetation of sub-Antarctic Campbell Island are compared with those in the soil beneath to assess the accuracy of vegetation reconstructions made from dispersed phytolith assemblages. The soil phytoliths alone suggest the source vegetation is a grassland association for all study sites, which reflects none of the herb, fern or shrub component of the overlying vegetation. It is concluded that at this locality dispersed phytoliths on their own are not reliable indicators of source vegetation and should be used with caution in this context for palaeoecological studies. However, they can provide useful botanical information where all other organic material is absent. With further research, based on the abundance and diversity of Poaceae phytoliths observed in this and other studies, dispersed phytoliths from the fossil record have the potential to contribute significantly to the understanding of grassland ecosystem development in the geological past.

A new fossil species of the genus Limodromus Motschulsky, 1850 (Coleoptera: Carabidae: Platynini) from Baltic amber with remarks on its death process

2018 ◽  
Vol 49 (4) ◽  
pp. 399-408
Author(s):  
Sara Gamboa ◽  
Vicente M. Ortuño
Keyword(s):  
New Species ◽  
Fossil Record ◽  
Species Group ◽  
Morphological Features ◽  
Baltic Amber ◽  
Sister Taxon ◽  
Death Process ◽  
Fossil Species

Limodromus emetikos sp. n. (Coleoptera: Carabidae) is described and illustrated from Baltic amber (Eocene). Based on its morphological features, the new species is considered a sister taxon of the extant Holarctic assimilis species group. Furthermore, the specimen described here could represent a case of stress-triggered regurgitation, which would represent the first fossil record of such a process in beetles.

scholarly journals How, when, and where relic DNA biases estimates of microbial diversity

2017 ◽  
Author(s):  
JT Lennon ◽  
ME Muscarella ◽  
SA Muscarella ◽  
BK Lehmkuhl
Keyword(s):  
Microbial Diversity ◽  
Dna Sequences ◽  
Species Abundance ◽  
Rrna Gene ◽  
Bacterial Dna ◽  
Soil Sediment ◽  
Species Abundance Distributions ◽  
Abundance And Diversity ◽  
Dna Pool ◽  
Biased Estimates

Extracellular or “relic” DNA is one of the largest pools of nucleic acids in the mbiosphere1,2. Relic DNA can influence a number of important ecological and evolutionary processes, but it may also bias estimates of microbial abundance and diversity, which has implications for understanding environmental, engineered, and host-associated ecosystems. We developed models capturing the fundamental processes that regulate the size and composition of the relic DNA pools to identify scenarios leading to biased estimates of biodiversity. Our models predict that bias increases with relic DNA pool size, but only when the species abundance distributions (SAD) of relic and intact DNA are distinct from one another. We evaluated our model predictions by quantifying relic DNA and assessing its contribution to bacterial diversity using 16S rRNA gene sequences collected from different ecosystem types, including soil, sediment, water, and the mammalian gut. On average, relic DNA made up 33 % of the total bacterial DNA pool, but exceeded 80 % in some samples. Despite its abundance, relic DNA had no effect on estimates of taxonomic and phylogenetic diversity, even in ecosystems where processes such as the physical protection of relic DNA are common and predicted by our models to generate bias. Rather, our findings are consistent with the expectation that relic DNA sequences degrade in proportion to their abundance and therefore may contribute minimally to estimates of microbial diversity.

scholarly journals Spider crabs of the Western Atlantic with special reference to fossil and some modern Mithracidae

PeerJ ◽  
2015 ◽  
Vol 3 ◽  
pp. e1301 ◽  
Author(s):  
Adiël A. Klompmaker ◽  
Roger W. Portell ◽  
Aaron T. Klier ◽  
Vanessa Prueter ◽  
Alyssa L. Tucker
Keyword(s):  
Fossil Record ◽  
Early Pleistocene ◽  
Caribbean Region ◽  
Deep Time ◽  
Western Atlantic ◽  
Extant Species ◽  
Length Width ◽  
The Caribbean ◽  
Abundance And Diversity ◽  
First Time

Spider crabs (Majoidea) are well-known from modern oceans and are also common in the western part of the Atlantic Ocean. When spider crabs appeared in the Western Atlantic in deep time, and when they became diverse, hinges on their fossil record. By reviewing their fossil record, we show that (1) spider crabs first appeared in the Western Atlantic in the Late Cretaceous, (2) they became common since the Miocene, and (3) most species and genera are found in the Caribbean region from the Miocene onwards. Furthermore, taxonomic work on some modern and fossil Mithracidae, a family that might have originated in the Western Atlantic, was conducted. Specifically,Maguimithraxgen. nov. is erected to accommodate the extant speciesDamithrax spinosissimus, whileDamithraxcf.pleuracanthusis recognized for the first time from the fossil record (late Pliocene–early Pleistocene, Florida, USA). Furthermore, two new species are described from the lower Miocene coral-associated limestones of Jamaica (Mithrax arawakumsp. nov. andNemausa windsoraesp. nov.). Spurred by a recent revision of the subfamily, two known species from the same deposits are refigured and transferred to new genera:Mithrax donovanitoNemausa, andMithrax unguistoDamithrax. The diverse assemblage of decapods from these coral-associated limestones underlines the importance of reefs for the abundance and diversity of decapods in deep time. Finally, we quantitatively show that these crabs possess allometric growth in that length/width ratios drop as specimens grow, a factor that is not always taken into account while describing and comparing among taxa.

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