scholarly journals Genomic signatures of evolutionary rescue in bats surviving white-nose syndrome

2018 ◽  
Author(s):  
Sarah A. Gignoux-Wolfsohn ◽  
Malin L. Pinsky ◽  
Kathleen Kerwin ◽  
Carl Herzog ◽  
MacKenzie Hall ◽  
...  

AbstractRapid evolution of advantageous traits following abrupt environmental change can help populations grow and avoid extinction through evolutionary rescue. Here, we provide the first genetic evidence for rapid evolution in bat populations affected by white-nose syndrome (WNS). By comparing genetic samples from before and after little brown bat populations were decimated by WNS, we identified signatures of soft selection on standing genetic variation. This selection occurred at multiple loci in genes linked to hibernation behavior rather than immune function, suggesting that differences in hibernation strategy have allowed these bats to survive infection with WNS. Through these findings, we suggest that evolutionary rescue can be a conservationrelevant process even in slowly reproducing taxa threatened with extinction.

Science ◽  
2019 ◽  
Vol 364 (6439) ◽  
pp. 455-457 ◽  
Author(s):  
Elias M. Oziolor ◽  
Noah M. Reid ◽  
Sivan Yair ◽  
Kristin M. Lee ◽  
Sarah Guberman VerPloeg ◽  
...  

Radical environmental change that provokes population decline can impose constraints on the sources of genetic variation that may enable evolutionary rescue. Adaptive toxicant resistance has rapidly evolved in Gulf killifish (Fundulus grandis) that occupy polluted habitats. We show that resistance scales with pollution level and negatively correlates with inducibility of aryl hydrocarbon receptor (AHR) signaling. Loci with the strongest signatures of recent selection harbor genes regulating AHR signaling. Two of these loci introgressed recently (18 to 34 generations ago) from Atlantic killifish (F. heteroclitus). One introgressed locus contains a deletion in AHR that confers a large adaptive advantage [selection coefficient (s) = 0.8]. Given the limited migration of killifish, recent adaptive introgression was likely mediated by human-assisted transport. We suggest that interspecies connectivity may be an important source of adaptive variation during extreme environmental change.


Author(s):  
Anna Vanselow ◽  
Lukas Halekotte ◽  
Ulrike Feudel

AbstractThe transformation of ecosystems proceeds at unprecedented rates. Recent studies suggest that high rates of environmental change can cause rate-induced tipping. In ecological models, the associated rate-induced critical transition manifests during transient dynamics in which populations drop to dangerously low densities. In this work, we study how indirect evolutionary rescue—due to the rapid evolution of a predator’s trait—can save a prey population from the rate-induced collapse. Therefore, we explicitly include the time-dependent dynamics of environmental change and evolutionary adaptation in an eco-evolutionary system. We then examine how fast the evolutionary adaptation needs to be to counteract the response to environmental degradation and express this relationship by means of a critical rate. Based on this critical rate, we conclude that indirect evolutionary rescue is more probable if the predator population possesses a high genetic variation and, simultaneously, the environmental change is slow. Hence, our results strongly emphasize that the maintenance of biodiversity requires a deceleration of the anthropogenic degradation of natural habitats.


2016 ◽  
Author(s):  
Hildegard Uecker

AbstractSevere environmental change can drive a population extinct unless the population adapts in time to the new conditions (“evolutionary rescue”). How does bi-parental sexual reproduction influence the chances of population persistence compared to clonal reproduction or selfing? In this paper, we set up a one-locus two-allele model for adaptation in diploid species, where rescue is contingent on the establishment of the mutant homozygote. Reproduction can occur by random mating, selfing, or clonally. Random mating generates and destroys the rescue mutant; selfing is efficient at generating it but at the same time depletes the heterozygote, which can lead to a low mutant frequency in the standing genetic variation and also affects the establishment probability of the mutation. Due to these antagonistic effects, we find a non-trivial dependence of population survival on the rate of sex/selfing, which is strongly affected by the dominance coefficient of the mutation before and after the environmental change. Importantly, since mating with the wildtype breaks the mutant homozygote up, a slow decay of the wildtype population size can impede rescue in randomly mating populations.


2013 ◽  
Vol 3 (6) ◽  
pp. 20130036 ◽  
Author(s):  
Gregor F. Fussmann ◽  
Andrew Gonzalez

The persistence of ecological communities is challenged by widespread and rapid environmental change. In many cases, persistence may not be assured via physiological acclimation or migration and so species must adapt rapidly in situ . This process of evolutionary rescue (ER) occurs when genetic adaptation allows a population to recover from decline initiated by environmental change that would otherwise cause extirpation. Community evolutionary rescue (CER) occurs when one or more species undergo a rapid evolutionary response to environmental change, resulting in the recovery of the ancestral community. Here, we study the dynamics of CER within a three-species community coexisting by virtue of resource oscillations brought about by nonlinear interactions between two species competing for a live resource. We allowed gradual environmental change to affect the traits that determine the strength and symmetry of the interaction among species. By allowing the component species to evolve rapidly, we found that: (i) trait evolution can allow CER and ensure the community persists by preventing competitive exclusion during environmental change, (ii) CER brings about a change in the character of the oscillations (period, amplitude) governing coexistence before and after environmental change, and (iii) CER may depend on evolutionary change that occurs simultaneously with or subsequently to environmental change. We were able to show that a change in the character of community oscillations may be a signature that a community is undergoing ER. Our study extends the theory on ER to a world of nonlinear community dynamics where—despite high-frequency changes of population abundances—adaptive evolutionary trait change can be gradual and directional, and therefore contribute to community rescue. ER may happen in real, complex communities that fluctuate owing to a mix of external and internal forces. Experiments testing this theory are now required to validate our predictions.


2020 ◽  
Author(s):  
Anna Vanselow ◽  
Lukas Halekotte ◽  
Ulrike Feudel

Today, the transformation of ecosystems proceeds at unprecedented rates. Recent studies suggest that high rates of environmental change can cause rate-induced tipping. In ecological models, the associated rate-induced critical transition manifests during transient dynamics in which populations drop to dangerously low densities. In this work, we study how \indirect evolutionary rescue - due to the rapid evolution of a predator's trait - can save a prey population from the rate-induced collapse. Therefore, we explicitly include the time-dependent dynamics of environmental change and evolutionary adaptation in an eco-evolutionary system. We then examine how fast the evolutionary adaptation needs to be to counteract the response to environmental degradation and express this relationship by means of a critical rate. Based on this critical rate, we conclude that indirect evolutionary rescue is more probable if the predator population possesses a high genetic variation and, simultaneously, the environmental change is slow. Hence, our results strongly emphasize that the maintenance of biodiversity requires a deceleration of the anthropogenic degradation of natural habitats.


2021 ◽  
Author(s):  
Ulrike Feudel ◽  
Anna Vanselow ◽  
Lukas Halekotte

<p>Nowadays, populations are faced with unprecedented rates of global climate change, habitat fragmentation and destruction causing an accelerating conversion of their living conditions. Critical transitions in ecosystems, often called regime shifts, lead to sudden shifts in the dominance of species or even to species’ extinction and decline of biodiversity. Many regime shifts are explained as transitions between alternative stable states caused by (i) certain bifurcations when certain parameters or external forcing cross critical thresholds, (ii) fluctuations or (iii) extreme events. We address a fourth mechanism which does not require alternative states but instead, the system performs a large excursion away from its usual behaviour when environmental  conditions change too fast. During this excursion, the system can embrace dangerously, unexpected states. We demonstrate that predator-prey systems can exhibit a population collapse if the rate of environmental change crosses a certain critical rate. In reference to this critical rate of change which has to be surpassed, this transition is called rate-induced tipping (R-tipping). A further difference to the other three tipping mechanisms is that R-tipping mainly manifests during the transient dynamics – the dynamics before the long-term dynamics are reached.  Whether a system will track its usual state or will tip with the consequence of a possible extinction of a species depends crucially on the time scale relations between the ecological timescale and the time scale of environmental change as well as the initial condition. However, populations have the ability to respond to environmental change due to rapid evolution. Employing an eco-evolutionary model we show how such kind of adaptation can prevent rate-induced tipping in predator-prey systems. The corresponding mechanism, called evolutionary rescue, introduces a third timescale which needs to be taken into account. Only a large genetic variation within a population reflecting rapid evolution would be able to successfully counteract an overcritically fast environmental change.</p><p> </p>


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Juan Lu ◽  
Chun-lei Chen ◽  
Jian-di Jin ◽  
Jun Chen ◽  
Cheng-bo Yu

Abstract Background Serum levels of procalcitonin (PCT) are considered a useful biomarker for the diagnosis of bacterial infection or inflammation. There are few reports of high PCT levels in end-stage liver disease regardless of bacterial infection. Here, we present a case of extremely high PCT levels (> 100 ng/mL) in a patient with severe cirrhosis combined with hepatic carcinoma. Case presentation A 65-year-old man developed end-stage cirrhosis with hepatic carcinoma. Radiographic imaging showed a massive hepatocellular carcinoma with multiple loci lack of indications of resection. Hence, transcatheter hepatic arterial chemoembolization was performed three times over a period of 4 months. Before and after interventional therapies, the biochemistry laboratory results were only slightly abnormal except for persistently high PCT concentrations (> 100 ng/mL), irrespective of the evidence for bacterial infection or sepsis. Conclusions This case suggests that continuously high levels of PCT (> 100 ng/mL) may be present in advanced liver disease, particularly in complex situations such as decompensated cirrhosis and liver cancer, in the absence of severe infection or sepsis. This knowledge could expand the significance of PCT in liver disease.


PLoS Genetics ◽  
2018 ◽  
Vol 14 (11) ◽  
pp. e1007731 ◽  
Author(s):  
Thiago S. Guzella ◽  
Snigdhadip Dey ◽  
Ivo M. Chelo ◽  
Ania Pino-Querido ◽  
Veronica F. Pereira ◽  
...  

2016 ◽  
Author(s):  
Eleanor K. O’Brien ◽  
Megan Higgie ◽  
Alan Reynolds ◽  
Ary A. Hoffmann ◽  
Jon R. Bridle

ABSTRACTPredicting how species will respond to the rapid climatic changes predicted this century is an urgent task. Species Distribution Models (SDMs) use the current relationship between environmental variation and species’ abundances to predict the effect of future environmental change on their distributions. However, two common assumptions of SDMs are likely to be violated in many cases: (1) that the relationship of environment with abundance or fitness is constant throughout a species’ range and will remain so in future, and (2) that abiotic factors (e.g. temperature, humidity) determine species’ distributions. We test these assumptions by relating field abundance of the rainforest fruit fly Drosophila birchii to ecological change across gradients that include its low and high altitudinal limits. We then test how such ecological variation affects the fitness of 35 D. birchii families transplanted in 591 cages to sites along two altitudinal gradients, to determine whether genetic variation in fitness responses could facilitate future adaptation to environmental change. Overall, field abundance was highest at cooler, high altitude sites, and declined towards warmer, low altitude sites. By contrast, cage fitness (productivity) increased towards warmer, lower altitude sites, suggesting that biotic interactions (absent from cages) drive ecological limits at warmer margins. In addition, the relationship between environmental variation and abundance varied significantly among gradients, indicating divergence in ecological niche across the species’ range. However, there was no evidence for local adaptation within gradients, despite greater productivity of high altitude than low altitude populations when families were reared under laboratory conditions. Families also responded similarly to transplantation along gradients, providing no evidence for fitness trade-offs that would favour local adaptation. These findings highlight the importance of (1) measuring genetic variation of key traits under ecologically relevant conditions, and (2) considering the effect of biotic interactions when predicting species’ responses to environmental change.


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