scholarly journals Rapid, ultra-local adaptation facilitated by phenotypic plasticity

2019 ◽  
Author(s):  
Syuan-Jyun Sun ◽  
Andrew M. Catherall ◽  
Sonia Pascoal ◽  
Benjamin J. M. Jarrett ◽  
Sara E. Miller ◽  
...  
Keyword(s):  
Gene Flow ◽  
Rapid Evolution ◽  
Reaction Norm ◽  
Ancestral Population ◽  
Adaptive Divergence ◽  
Wild Populations ◽  
Rapid Adaptation ◽  
Burying Beetles ◽  
Genetic Accommodation ◽  
Nicrophorus Vespilloides

AbstractModels of ‘plasticity-first’ evolution are attractive because they explain the rapid evolution of new complex adaptations. Nevertheless, it is unclear whether plasticity can still facilitate rapid evolution when diverging populations are connected by gene flow. Here we show how plasticity has generated adaptive divergence in fecundity in wild populations of burying beetlesNicrophorus vespilloides, which are still connected by gene flow, which occupy distinct Cambridgeshire woodlands that are just 2.5km apart and which diverged from a common ancestral population c. 1000-4000 years ago. We show that adaptive divergence is duetothe coupling of an evolved increase in the elevation of the reaction norm linking clutch size to carrion size (i.e. genetic accommodation) with plastic secondary elimination of surplus offspring. Working in combination, these two processes have facilitated rapid adaptation to fine-scale environmental differences, despite ongoing gene flow.

scholarly journals Rapid adaptation with gene flow via a reservoir of chromosomal inversion variation?

2017 ◽  
Author(s):  
Qixin He ◽  
L. Lacey Knowles
Keyword(s):  
Gene Flow ◽  
Environmental Changes ◽  
Point Mutations ◽  
Secondary Contact ◽  
Adaptive Divergence ◽  
Clear Understanding ◽  
Rapid Adaptation ◽  
Chromosomal Inversions ◽  
Divergence With Gene Flow ◽  
New Mutations

AbstractThe increased recognition of frequent divergence with gene flow has renewed interest in chromosomal inversions as a source for promoting adaptive divergence. Inversions can suppress recombination between heterokaryotypes so that local adapted inversions will be protected from introgression with the migrants. However, we do not have a clear understanding of the conditions for which adaptive divergence is more or less likely to be promoted by inversions when the availability of inversion variation is considered. Standing genetic variation, as opposed to new mutations, could offer a quick way to respond to sudden environmental changes, making it a likely avenue for rapid adaptation. For a scenario of secondary contact between locally-adapted populations, we might intuit that standing inversion variation would predominate over new inversion mutations in maintaining local divergence. Our results show that this is not always the case. Maladaptive gene flow, as both a demographic parameter and the cause for selection that favors locally-adapted inversions, differentiates the dynamics of standing inversion variation from that of segregating point mutations. Counterintuitively, in general, standing inversion variation will be less important to the adaptation than new inversions under the demographic and genetic conditions that are more conducive to adaptive divergence via inversions.

scholarly journals Adaptive Divergence under Gene Flow along an Environmental Gradient in Two Coexisting Stickleback Species

Genes ◽  
2021 ◽  
Vol 12 (3) ◽  
pp. 435
Author(s):  
Thijs M. P. Bal ◽  
Alejandro Llanos-Garrido ◽  
Anurag Chaturvedi ◽  
Io Verdonck ◽  
Bart Hellemans ◽  
...  
Keyword(s):  
Gene Flow ◽  
Brackish Water ◽  
Environmental Gradient ◽  
Spatial Scales ◽  
Morphological Differentiation ◽  
Genotyping By Sequencing ◽  
Adaptive Divergence ◽  
Linkage Groups ◽  
Closely Related Species ◽  
Genomic Patterns

There is a general and solid theoretical framework to explain how the interplay between natural selection and gene flow affects local adaptation. Yet, to what extent coexisting closely related species evolve collectively or show distinctive evolutionary responses remains a fundamental question. To address this, we studied the population genetic structure and morphological differentiation of sympatric three-spined and nine-spined stickleback. We conducted genotyping-by-sequencing and morphological trait characterisation using 24 individuals of each species from four lowland brackish water (LBW), four lowland freshwater (LFW) and three upland freshwater (UFW) sites in Belgium and the Netherlands. This combination of sites allowed us to contrast populations from isolated but environmentally similar locations (LFW vs. UFW), isolated but environmentally heterogeneous locations (LBW vs. UFW), and well-connected but environmentally heterogenous locations (LBW vs. LFW). Overall, both species showed comparable levels of genetic diversity and neutral genetic differentiation. However, for all three spatial scales, signatures of morphological and genomic adaptive divergence were substantially stronger among populations of the three-spined stickleback than among populations of the nine-spined stickleback. Furthermore, most outlier SNPs in the two species were associated with local freshwater sites. The few outlier SNPs that were associated with the split between brackish water and freshwater populations were located on one linkage group in three-spined stickleback and two linkage groups in nine-spined stickleback. We conclude that while both species show congruent evolutionary and genomic patterns of divergent selection, both species differ in the magnitude of their response to selection regardless of the geographical and environmental context.

Intended and unintended receivers of the male pheromones of the burying beetles Nicrophorus humator and Nicrophorus vespilloides

2011 ◽  
Vol 140 (2) ◽  
pp. 122-126 ◽  
Author(s):  
Wolf Haberer ◽  
Thomas Schmitt ◽  
Peter Schreier ◽  
Josef K. Müller
Keyword(s):  
Burying Beetles ◽  
Male Pheromones ◽  
Nicrophorus Vespilloides

scholarly journals Evolutionary change in the construction of the nursery environment when parents are prevented from caring for their young directly

2021 ◽  
Vol 118 (48) ◽  
pp. e2102450118
Author(s):  
Ana Duarte ◽  
Darren Rebar ◽  
Allysa C. Hallett ◽  
Benjamin J. M. Jarrett ◽  
Rebecca M. Kilner
Keyword(s):  
Parental Care ◽  
Experimental Evolution ◽  
Evolutionary Change ◽  
Direct Care ◽  
Dead Body ◽  
Extended Phenotype ◽  
Burying Beetle ◽  
Burying Beetles ◽  
Nicrophorus Vespilloides ◽  
Cross Fostering

Parental care can be partitioned into traits that involve direct engagement with offspring and traits that are expressed as an extended phenotype and influence the developmental environment, such as constructing a nursery. Here, we use experimental evolution to test whether parents can evolve modifications in nursery construction when they are experimentally prevented from supplying care directly to offspring. We exposed replicate experimental populations of burying beetles (Nicrophorus vespilloides) to different regimes of posthatching care by allowing larvae to develop in the presence (Full Care) or absence of parents (No Care). After only 13 generations of experimental evolution, we found an adaptive evolutionary increase in the pace at which parents in the No Care populations converted a dead body into a carrion nest for larvae. Cross-fostering experiments further revealed that No Care larvae performed better on a carrion nest prepared by No Care parents than did Full Care larvae. We conclude that parents construct the nursery environment in relation to their effectiveness at supplying care directly, after offspring are born. When direct care is prevented entirely, they evolve to make compensatory adjustments to the nursery in which their young will develop. The rapid evolutionary change observed in our experiments suggests there is considerable standing genetic variation for parental care traits in natural burying beetle populations—for reasons that remain unclear.

scholarly journals Efficient Maximum-Likelihood Inference For The Isolation-With-Initial-Migration Model With Potentially Asymmetric Gene Flow

2016 ◽  
Author(s):  
Rui J. Costa ◽  
Hilde Wilkinson-Herbots
Keyword(s):  
Gene Flow ◽  
Maximum Likelihood ◽  
Dna Sequences ◽  
Computing Time ◽  
Likelihood Method ◽  
Ancestral Population ◽  
Parameter Estimates ◽  
Fast Method ◽  
Data Set ◽  
Im Model

AbstractThe isolation-with-migration (IM) model is commonly used to make inferences about gene flow during speciation, using polymorphism data. However, Becquet and Przeworski (2009) report that the parameter estimates obtained by fitting the IM model are very sensitive to the model's assumptions (including the assumption of constant gene flow until the present). This paper is concerned with the isolation-with-initial-migration (IIM) model of Wilkinson-Herbots (2012), which drops precisely this assumption. In the IIM model, one ancestral population divides into two descendant subpopulations, between which there is an initial period of gene flow and a subsequent period of isolation. We derive a very fast method of fitting an extended version of the IIM model, which also allows for asymmetric gene flow and unequal population sizes. This is a maximum-likelihood method, applicable to data on the number of segregating sites between pairs of DNA sequences from a large number of independent loci. In addition to obtaining parameter estimates, our method can also be used to distinguish between alternative models representing different evolutionary scenarios, by means of likelihood ratio tests. We illustrate the procedure on pairs of Drosophila sequences from approximately 30,000 loci. The computing time needed to fit the most complex version of the model to this data set is only a couple of minutes. The R code to fit the IIM model can be found in the supplementary files of this paper.

scholarly journals The effect of size and sex ratio experiences on reproductive competition in Nicrophorus vespilloides burying beetles in the wild

2016 ◽  
Vol 29 (3) ◽  
pp. 541-550 ◽  
Author(s):  
P. E. Hopwood ◽  
A. J. Moore ◽  
T. Tregenza ◽  
N. J. Royle
Keyword(s):  
Sex Ratio ◽  
Reproductive Competition ◽  
Burying Beetles ◽  
Nicrophorus Vespilloides ◽  
In The Wild

scholarly journals Targeted gene flow and rapid adaptation in an endangered marsupial

2018 ◽  
Vol 33 (1) ◽  
pp. 112-121 ◽  
Author(s):  
Ella Kelly ◽  
Ben L. Phillips
Keyword(s):  
Gene Flow ◽  
Rapid Adaptation

scholarly journals Analysis of genetic population structure and diversity in Mallotus oblongifolius using ISSR and SRAP markers

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7173 ◽  
Author(s):  
Wuping Yan ◽  
Juanling Li ◽  
Daojun Zheng ◽  
Cynthia Friedman ◽  
Huafeng Wang
Keyword(s):  
Genetic Diversity ◽  
Gene Flow ◽  
Hainan Island ◽  
Issr Markers ◽  
Adaptive Divergence ◽  
Group Method ◽  
Market Demand ◽  
Srap Markers ◽  
Clustering Model ◽  
Geographical Regions

Background Mallotus oblongifolius, an evergreen shrub endemic to Hainan Island, China, is important both medicinally and economically. Due to its special medicinal significance and the continuing rise of market demand, its populations in the wild have been subject to long-term illegal and unrestrained collection. Hence, an evaluation of genetic variability is essential for the conservation and genetic reserve development of this species. Methods Sequence-related amplified polymorphism (SRAP) and inter-simple sequence repeat (ISSR) markers were employed to assess the genetic diversity and genetic structure of 20 natural populations of M. oblongifolius growing in different eco-geographical regions of Hainan Island, China. Results We revealed a considerable genetic diversity (h = 0.336, I = 0.5057, SRAP markers; h = 0.3068, I = 0.4657, ISSR markers) and weak genetic differentiation (Gst = 0.2764 for SRAP, Gst = 0.2709 for ISSR) with the same gene flow (Nm = 1.3092 for SRAP, Nm = 1.346 for ISSR) among the M. oblongifolius populations. The Mantel Test showed that the distribution of genetic variation among populations could not be explained by the pronounced geographical distances (r = 0.01255, p = 0.5538). All results of the Unweighted Pair Group Method with Arithmetic Mean (UPGMA), Neighbor-joining (NJ), Principal Coordinate Analysis (PCoA) and Bayesian analyses supported a habitat-specific genetic clustering model for M. oblongifolius, indicating a local adaptive divergence for the studied populations. Discussion We suggested that the habitat fragmentation and specificity for M. oblongifolius populations weakened the natural gene flow and promoted an adaptation to special habitats, which was the main reason for local adaptive divergence among M. oblongifolius.

The ‘Widow Effect’ and its Consequences for Reproduction in Burying Beetles, Nicrophorus vespilloides (Coleoptera: Silphidae)

Ethology ◽  
2010 ◽  
Vol 104 (7) ◽  
pp. 553-564 ◽  
Author(s):  
Scott K. Sakaluk ◽  
Anne-Katrin Eggert ◽  
Josef K. Müller
Keyword(s):  
Burying Beetles ◽  
Nicrophorus Vespilloides

scholarly journals Rapid evolution of cold tolerance in stickleback

2010 ◽  
Vol 278 (1703) ◽  
pp. 233-238 ◽  
Author(s):  
Rowan D. H. Barrett ◽  
Antoine Paccard ◽  
Timothy M. Healy ◽  
Sara Bergek ◽  
Patricia M. Schulte ◽  
...  
Keyword(s):  
Cold Tolerance ◽  
Gasterosteus Aculeatus ◽  
Field Experiments ◽  
Rapid Evolution ◽  
Natural Populations ◽  
Temperature Tolerance ◽  
Ancestral Population ◽  
Biological Communities ◽  
Evolutionary Consequences ◽  
Short Time

Climate change is predicted to lead to increased average temperatures and greater intensity and frequency of high and low temperature extremes, but the evolutionary consequences for biological communities are not well understood. Studies of adaptive evolution of temperature tolerance have typically involved correlative analyses of natural populations or artificial selection experiments in the laboratory. Field experiments are required to provide estimates of the timing and strength of natural selection, enhance understanding of the genetics of adaptation and yield insights into the mechanisms driving evolutionary change. Here, we report the experimental evolution of cold tolerance in natural populations of threespine stickleback fish ( Gasterosteus aculeatus ). We show that freshwater sticklebacks are able to tolerate lower minimum temperatures than marine sticklebacks and that this difference is heritable. We transplanted marine sticklebacks to freshwater ponds and measured the rate of evolution after three generations in this environment. Cold tolerance evolved at a rate of 0.63 haldanes to a value 2.5°C lower than that of the ancestral population, matching values found in wild freshwater populations. Our results suggest that cold tolerance is under strong selection and that marine sticklebacks carry sufficient genetic variation to adapt to changes in temperature over remarkably short time scales.

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