scholarly journals Differential propagation of ripples along the proximo-distal and septo-temporal axes of dorsal CA1 of rats

2019 ◽  
Author(s):  
Mekhala Kumar ◽  
Sachin S. Deshmukh
Keyword(s):  
Neural Network ◽  
Functional Connectivity ◽  
Spatial Scale ◽  
Entorhinal Cortex ◽  
Spatial Resolution ◽  
Cortical Input ◽  
Area Ca1 ◽  
Spatial Range

AbstractThe functional connectivity of the hippocampus with its primary cortical input, the entorhinal cortex, is organized topographically. In area CA1 of the hippocampus, this leads to different functional gradients along the proximo-distal and septo-temporal axes of spatial/sensory responsivity and spatial resolution respectively. CA1 ripples, a network phenomenon, allows us to test whether the hippocampal neural network shows corresponding gradients in functional connectivity along the two axes. We studied the occurrence and propagation of ripples across the entire proximo-distal axis along with a comparable spatial range of the septo-temporal axis of dorsal CA1. We observed that ripples could occur at any location, but their probability of co-occurrence and amplitude decreased with increasing distance from the reference tetrode. This reduction was greater along the proximo-distal axis than the septo-temporal axis. Furthermore, we found that ripples propagate primarily along the proximo-distal axis. Thus, over a spatial scale of ~1.5 mm, the network is anisotropic along the two axes, complementing the topographically organized cortico-hippocampal connections.

scholarly journals Early stages of tau pathology and its associations with functional connectivity, atrophy and memory

Brain ◽  
2021 ◽  
Author(s):  
David Berron ◽  
Jacob W Vogel ◽  
Philip S Insel ◽  
Joana B Pereira ◽  
Long Xie ◽  
...  
Keyword(s):  
Functional Connectivity ◽  
Entorhinal Cortex ◽  
Temporal Lobe ◽  
Medial Temporal Lobe ◽  
Memory Impairment ◽  
Memory Performance ◽  
Hippocampal Atrophy ◽  
Tau Pathology ◽  
Β Amyloid ◽  
With Memory

Abstract In Alzheimer’s disease, postmortem studies have shown that the first cortical site where neurofibrillary tangles appear is the transentorhinal region, a subregion within the medial temporal lobe that largely overlaps with area 35, and the entorhinal cortex. Here we used tau-PET imaging to investigate the sequence of tau pathology progression within the human medial temporal lobe and across regions in the posterior-medial system. Our objective was to study how medial temporal tau is related to functional connectivity, regional atrophy, and memory performance. We included 215 β-amyloid negative cognitively unimpaired, 81 β-amyloid positive cognitively unimpaired and 87 β-amyloid positive individuals with mild cognitive impairment, who each underwent [18]F-RO948 tau and [18]F-flutemetamol amyloid PET imaging, structural T1-MRI and memory assessments as part of the Swedish BioFINDER-2 study. First, event-based modelling revealed that the entorhinal cortex and area 35 show the earliest signs of tau accumulation followed by the anterior and posterior hippocampus, area 36 and the parahippocampal cortex. In later stages, tau accumulation became abnormal in neocortical temporal and finally parietal brain regions. Second, in cognitively unimpaired individuals, increased tau load was related to local atrophy in the entorhinal cortex, area 35 and the anterior hippocampus and tau load in several anterior medial temporal lobe subregions was associated with distant atrophy of the posterior hippocampus. Tau load, but not atrophy, in these regions was associated with lower memory performance. Further, tau-related reductions in functional connectivity in critical networks between the medial temporal lobe and regions in the posterior-medial system were associated with this early memory impairment. Finally, in patients with mild cognitive impairment, the association of tau load in the hippocampus with memory performance was partially mediated by posterior hippocampal atrophy. In summary, our findings highlight the progression of tau pathology across medial temporal lobe subregions and its disease-stage specific association with memory performance. While tau pathology might affect memory performance in cognitively unimpaired individuals via reduced functional connectivity in critical medial temporal lobe-cortical networks, memory impairment in mild cognitively impaired patients is associated with posterior hippocampal atrophy.

scholarly journals Deriving VIIRS High-Spatial Resolution Water Property Data over Coastal and Inland Waters Using Deep Convolutional Neural Network

2021 ◽  
Vol 13 (10) ◽  
pp. 1944
Author(s):  
Xiaoming Liu ◽  
Menghua Wang
Keyword(s):  
Neural Network ◽  
High Resolution ◽  
Spatial Resolution ◽  
High Spatial Resolution ◽  
Ocean Color ◽  
Super Resolution ◽  
Inland Waters ◽  
Coastal Oceans ◽  
Chl A ◽  
Color Data

The Visible Infrared Imaging Radiometer Suite (VIIRS) onboard the Suomi National Polar-orbiting Partnership (SNPP) satellite has been a reliable source of ocean color data products, including five moderate (M) bands and one imagery (I) band normalized water-leaving radiance spectra nLw(λ). The spatial resolutions of the M-band and I-band nLw(λ) are 750 m and 375 m, respectively. With the technique of convolutional neural network (CNN), the M-band nLw(λ) imagery can be super-resolved from 750 m to 375 m spatial resolution by leveraging the high spatial resolution features of I1-band nLw(λ) data. However, it is also important to enhance the spatial resolution of VIIRS-derived chlorophyll-a (Chl-a) concentration and the water diffuse attenuation coefficient at the wavelength of 490 nm (Kd(490)), as well as other biological and biogeochemical products. In this study, we describe our effort to derive high-resolution Kd(490) and Chl-a data based on super-resolved nLw(λ) images at the VIIRS five M-bands. To improve the network performance over extremely turbid coastal oceans and inland waters, the networks are retrained with a training dataset including ocean color data from the Bohai Sea, Baltic Sea, and La Plata River Estuary, covering water types from clear open oceans to moderately turbid and highly turbid waters. The evaluation results show that the super-resolved Kd(490) image is much sharper than the original one, and has more detailed fine spatial structures. A similar enhancement of finer structures is also found in the super-resolved Chl-a images. Chl-a filaments are much sharper and thinner in the super-resolved image, and some of the very fine spatial features that are not shown in the original images appear in the super-resolved Chl-a imageries. The networks are also applied to four other coastal and inland water regions. The results show that super-resolution occurs mainly on pixels of Chl-a and Kd(490) features, especially on the feature edges and locations with a large spatial gradient. The biases between the original M-band images and super-resolved high-resolution images are small for both Chl-a and Kd(490) in moderately to extremely turbid coastal oceans and inland waters, indicating that the super-resolution process does not change the mean values of the original images.

Feed-forward artificial neural network provides data-driven inference of functional connectivity

2019 ◽  
Vol 29 (9) ◽  
pp. 091101 ◽  
Author(s):  
Nikita Frolov ◽  
Vladimir Maksimenko ◽  
Annika Lüttjohann ◽  
Alexey Koronovskii ◽  
Alexander Hramov
Keyword(s):  
Neural Network ◽  
Artificial Neural Network ◽  
Functional Connectivity ◽  
Data Driven ◽  
Feed Forward ◽  
Artificial Neural

scholarly journals Global high-resolution monthly <i>p</i>CO<sub>2</sub> climatology for the coastal ocean derived from neural network interpolation

2017 ◽  
Vol 14 (19) ◽  
pp. 4545-4561 ◽  
Author(s):  
Goulven G. Laruelle ◽  
Peter Landschützer ◽  
Nicolas Gruber ◽  
Jean-Louis Tison ◽  
Bruno Delille ◽  
...  
Keyword(s):  
Neural Network ◽  
Spatial Resolution ◽  
Seasonal Variations ◽  
Open Ocean ◽  
Global Perspective ◽  
Strong Increase ◽  
Spatial And Temporal Variability ◽  
Surface Ocean ◽  
Shelf Seas ◽  
Artificial Neural Network Method

Abstract. In spite of the recent strong increase in the number of measurements of the partial pressure of CO2 in the surface ocean (pCO2), the air–sea CO2 balance of the continental shelf seas remains poorly quantified. This is a consequence of these regions remaining strongly under-sampled in both time and space and of surface pCO2 exhibiting much higher temporal and spatial variability in these regions compared to the open ocean. Here, we use a modified version of a two-step artificial neural network method (SOM-FFN; Landschützer et al., 2013) to interpolate the pCO2 data along the continental margins with a spatial resolution of 0.25° and with monthly resolution from 1998 to 2015. The most important modifications compared to the original SOM-FFN method are (i) the much higher spatial resolution and (ii) the inclusion of sea ice and wind speed as predictors of pCO2. The SOM-FFN is first trained with pCO2 measurements extracted from the SOCATv4 database. Then, the validity of our interpolation, in both space and time, is assessed by comparing the generated pCO2 field with independent data extracted from the LDVEO2015 database. The new coastal pCO2 product confirms a previously suggested general meridional trend of the annual mean pCO2 in all the continental shelves with high values in the tropics and dropping to values beneath those of the atmosphere at higher latitudes. The monthly resolution of our data product permits us to reveal significant differences in the seasonality of pCO2 across the ocean basins. The shelves of the western and northern Pacific, as well as the shelves in the temperate northern Atlantic, display particularly pronounced seasonal variations in pCO2,  while the shelves in the southeastern Atlantic and in the southern Pacific reveal a much smaller seasonality. The calculation of temperature normalized pCO2 for several latitudes in different oceanic basins confirms that the seasonality in shelf pCO2 cannot solely be explained by temperature-induced changes in solubility but are also the result of seasonal changes in circulation, mixing and biological productivity. Our results also reveal that the amplitudes of both thermal and nonthermal seasonal variations in pCO2 are significantly larger at high latitudes. Finally, because this product's spatial extent includes parts of the open ocean as well, it can be readily merged with existing global open-ocean products to produce a true global perspective of the spatial and temporal variability of surface ocean pCO2.

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