scholarly journals Corrigendum to “Genetic Diversity in Drug Transporters: Impact in African Populations”

Cytokine ◽  
2021 ◽  
pp. 155489
Author(s):  
Maria Paximadis ◽  
Anabela C.P. Picton ◽  
Dhriti Sengupta ◽  
Michele Ramsay ◽  
Adrian Puren ◽  
...  

2016 ◽  
Vol 9 (1) ◽  
Author(s):  
Hisham Y. Hassan ◽  
Anke van Erp ◽  
Martin Jaeger ◽  
Hanan Tahir ◽  
Marije Oosting ◽  
...  

2009 ◽  
Vol 30 (4) ◽  
pp. 483-492 ◽  
Author(s):  
Said Larbes ◽  
D. James Harris ◽  
Catarina Pinho ◽  
Alexandra Lima ◽  
José Carlos Brito ◽  
...  

AbstractRecent molecular studies indicate that Podarcis wall lizards occurring in the southern region of the Iberian Peninsula and in North Africa, from south Morocco to eastern Tunisia, constitute a monophyletic group composed of several highly differentiated forms that appear to be incipient species. However, Algerian populations, which are geographically intermediate, have not been investigated so far. In this study we determine the levels of genetic variability between Algerian populations and other North African populations, using a more extensive sampling scheme covering most of the distribution range in this area. Our results show that North African Podarcis present high genetic diversity, comprising at least five highly divergent lineages. Two of these lineages were only detected in Algeria, which harbours most of the genetic diversity found within Podarcis from North Africa.


2021 ◽  
Author(s):  
Elizabeth G. Atkinson ◽  
Shareefa Dalvie ◽  
Yakov Pichkar ◽  
Allan Kalungi ◽  
Lerato Majara ◽  
...  

African populations are the most diverse in the world yet are sorely underrepresented in medical genetics research. Here, we examine the structure of African populations using genetic and comprehensive multigenerational ethnolinguistic data from the Neuropsychiatric Genetics of African Populations-Psychosis study (NeuroGAP-Psychosis) consisting of 900 individuals from Ethiopia, Kenya, South Africa, and Uganda. We find that self-reported language classifications meaningfully tag underlying genetic variation that would be missed with consideration of geography alone, highlighting the importance of culture in shaping genetic diversity. Leveraging our uniquely rich multi-generational ethnolinguistic metadata, we track language transmission through the pedigree, observing the disappearance of several languages in our cohort as well as notable shifts in frequency over three generations. We further find significantly higher language transmission rates for matrilineal groups as compared to patrilineal. We highlight both the diversity of variation within the African continent, as well as how within-Africa variation can be informative for broader variant interpretation; many variants appearing rare elsewhere are common in parts of Africa. The work presented here improves the understanding of the spectrum of genetic variation in African populations and highlights the enormous and complex genetic and ethnolinguistic diversity within Africa.


Human Biology ◽  
2005 ◽  
Vol 77 (5) ◽  
pp. 675-704 ◽  
Author(s):  
Maria C. Terreros ◽  
Laisel Martinez ◽  
Rene J. Herrera

BMC Genetics ◽  
2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Lucy Crooks ◽  
Johnathan Cooper-Knock ◽  
Paul R. Heath ◽  
Ahmed Bouhouche ◽  
Mostafa Elfahime ◽  
...  

Abstract Background Large-scale human sequencing projects have described around a hundred-million single nucleotide variants (SNVs). These studies have predominately involved individuals with European ancestry despite the fact that genetic diversity is expected to be highest in Africa where Homo sapiens evolved and has maintained a large population for the longest time. The African Genome Variation Project examined several African populations but these were all located south of the Sahara. Morocco is on the northwest coast of Africa and mostly lies north of the Sahara, which makes it very attractive for studying genetic diversity. The ancestry of present-day Moroccans is unknown and may be substantially different from Africans found South of the Sahara desert, Recent genomic data of Taforalt individuals in Eastern Morocco revealed 15,000-year-old modern humans and suggested that North African individuals may be genetically distinct from previously studied African populations. Results We present SNVs discovered by whole genome sequencing (WGS) of three Moroccans. From a total of 5.9 million SNVs detected, over 200,000 were not identified by 1000G and were not in the extensive gnomAD database. We summarise the SNVs by genomic position, type of sequence gene context and effect on proteins encoded by the sequence. Analysis of the overall genomic information of the Moroccan individuals to individuals from 1000G supports the Moroccan population being distinct from both sub-Saharan African and European populations. Conclusions We conclude that Moroccan samples are genetically distinct and lie in the middle of the previously observed cline between populations of European and African ancestry. WGS of Moroccan individuals can identify a large number of novel SNVs and aid in functional characterisation of the genome.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Melanie Streicher ◽  
Sonja Krüger ◽  
Franziska Loercher ◽  
Sandi Willows-Munro

AbstractBackgroundThe bearded vulture is sparsely distributed across a wide geographic range that extends over three continents (Africa, Europe and Asia). Restriction to high-altitude mountainous habitats, low breeding rates, lack of food and a heightened level of persecution have left many local populations severely diminished or extinct. Understanding the genetic connectivity and population structure of this threatened vulture species is critical for accurately assessing their conservation status, and for appropriately managing local populations through captive breeding programmes or translocations. Previous genetic assessments of the species were mainly focused on the European and Asian populations and included limited representation of the geographically isolated southern African population. A single mitochondrial study, which focused on the African populations of the bearded vulture, detected limited genetic differentiation between populations in Ethiopia and southern Africa, with reduced haplotype diversity in the southern Africa population. In this study, we extend the previous genetic assessments of the species by examining the phylogeography and genetic connectivity of globalG. barbatuspopulations using a panel of 14 microsatellite loci.ResultsAnalyses revealed spatially correlated genetic differentiation between regional populations and low levels of gene flow between these population fragments. In contrast to the mitochondrial data, the microsatellite data support the management of genetically different populations as separate entities.ConclusionsLow genetic diversity and geographic isolation are known to adversely affect the evolutionary potential of a species in the long-term. The high inbreeding found in the southern AfricanG. barbatusand, to a lesser extent, the northern African populations highlights the need for conservation programmes to effectively manage populations of this species and maintain extant genetic diversity.


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