scholarly journals Support vector machine assisted morphological characterisation of retinal microglia in mice modelled with multiple sclerosis and age‐matched controls

2022 ◽  
Vol 100 (S267) ◽  
Author(s):  
Soyoung Choi ◽  
Daniel Hill ◽  
Vy Luong ◽  
Li Guo ◽  
Maria Francesca Cordeiro
Author(s):  
S HosseiniPanah ◽  
A Zamani ◽  
F Emadi ◽  
F HamtaeiPour

Background: Multiple Sclerosis (MS) syndrome is a type of Immune-Mediated disorder in the central nervous system (CNS) which destroys myelin sheaths, and results in plaque (lesion) formation in the brain. From the clinical point of view, investigating and monitoring information such as position, volume, number, and changes of these plaques are integral parts of the controlling process this disease over a period. Visualizing MS lesions in vivo with Magnetic Resonance Imaging (MRI) has a key role in observing the course of the disease.Material and Methods: Two different processing methods were present in this study in order to make an effort to detect and localize lesions in the patients’ FLAIR (Fluid-attenuated inversion recovery) images. Segmentation was performed using Ensemble Support Vector Machine (SVM) classification. The trained data was randomly divided into five equal sections, and each section was fed into the computer as an input to one of the SVM classifiers that led to five different SVM structures.Results: To evaluate results of segmentation, some criteria have been investigated such as Dice, Jaccard, sensitivity, specificity, PPV and accuracy. Both modes of ESVM, including first and second ones have similar results. Dice criterion was satisfied much better with specialist’s work and it is observed that Dice average has 0.57±.15 and 0.6±.12 values in the first and second approach, respectively.Conclusion: An acceptable overlap between those results reported by the neurologist and the ones obtained from the automatic segmentation algorithm was reached using an appropriate pre-processing in the proposed algorithm. Post-processing analysis further reduced false positives using morphological operations and also improved the evaluation criteria, including sensitivity and positive predictive value.


Sensors ◽  
2019 ◽  
Vol 19 (23) ◽  
pp. 5323 ◽  
Author(s):  
Carlo Cavaliere ◽  
Elisa Vilades ◽  
Mª Alonso-Rodríguez ◽  
María Rodrigo ◽  
Luis Pablo ◽  
...  

The purpose of this paper is to evaluate the feasibility of diagnosing multiple sclerosis (MS) using optical coherence tomography (OCT) data and a support vector machine (SVM) as an automatic classifier. Forty-eight MS patients without symptoms of optic neuritis and forty-eight healthy control subjects were selected. Swept-source optical coherence tomography (SS-OCT) was performed using a DRI (deep-range imaging) Triton OCT device (Topcon Corp., Tokyo, Japan). Mean values (right and left eye) for macular thickness (retinal and choroidal layers) and peripapillary area (retinal nerve fibre layer, retinal, ganglion cell layer—GCL, and choroidal layers) were compared between both groups. Based on the analysis of the area under the receiver operator characteristic curve (AUC), the 3 variables with the greatest discriminant capacity were selected to form the feature vector. A SVM was used as an automatic classifier, obtaining the confusion matrix using leave-one-out cross-validation. Classification performance was assessed with Matthew’s correlation coefficient (MCC) and the AUCCLASSIFIER. The most discriminant variables were found to be the total GCL++ thickness (between inner limiting membrane to inner nuclear layer boundaries), evaluated in the peripapillary area and macular retina thickness in the nasal quadrant of the outer and inner rings. Using the SVM classifier, we obtained the following values: MCC = 0.81, sensitivity = 0.89, specificity = 0.92, accuracy = 0.91, and AUCCLASSIFIER = 0.97. Our findings suggest that it is possible to classify control subjects and MS patients without previous optic neuritis by applying machine-learning techniques to study the structural neurodegeneration in the retina.


2021 ◽  
Vol 13 (1) ◽  
pp. 68-74
Author(s):  
Mohammad Moghadasi ◽  
Gabor Fazekas

Multiple sclerosis (MS) is an inflammatory, chronic, persistent, and destructive disease of the central nervous system whose cause is not yet known but can most likely be the result of a series of unknown environmental factors reacting with sensitive genes. MRI is a method of neuroimaging studies that results in better image contrast in soft tissue. Due to the unknown cause of MS and the lack of definitive treatment, early diagnosis of this disease is important. MRI image segmentation is used to identify MS plaques. MRI images have an image error that is often called non-uniform light intensity. There are several ways to correct non-uniform images. One of these methods is Nonparametric Non-uniform intensity Normalization (N3). This method sharpens the histogram. The aim of this study is to reduce the effect of bias field on the MRI image using N3 algorithm and pixels of MRI images clustered by k-means algorithm. The dimensionality of the data is reduced by Principal Component Analysis (PCA) algorithm and then the segmentation is done by Support Vector Machine (SVM) algorithm. Results show that using the proposed system could diagnose multiple sclerosis with an average accuracy of 93.28%.


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