scholarly journals Draft Genome Sequence of a Multidrug- and Colistin-Resistant mcr-1 -Producing Escherichia coli Isolate from a Swine Farm in Mexico

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Ulises Garza-Ramos ◽  
Elsa Tamayo-Legorreta ◽  
Doris María Arellano-Quintanilla ◽  
Nadia Rodriguez-Medina ◽  
Jesús Silva-Sanchez ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Swine Farm ◽  
Content Type ◽  
Coli Isolate ◽  
E Coli

ABSTRACT A colistin-resistant mcr-1 -carrying Escherichia coli strain, RC2-007, was isolated from a swine farm in Mexico. This extraintestinal and uropathogenic strain of E. coli belongs to serotype O89:H9 and sequence type 744. Assembly and annotation resulted in a 4.9-Mb draft genome that revealed the presence of plasmid-mediated mcr-1 -IS ApI1 genes as part of a prophage.

scholarly journals Draft Genome Sequence of a Multidrug-Resistant Escherichia coli Sequence Type 1193 Pandemic Clone Isolated from Wastewater in Austria

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
Adriana Cabal ◽  
Nadine Peischl ◽  
Gerhard Rab ◽  
Anna Stöger ◽  
Burkhard Springer ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Treatment Plant ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Content Type ◽  
E Coli

Extraintestinal Escherichia coli sequence type 1193 (ST1193) is an important source of fluoroquinolone resistance, which has emerged in recent years. We report the first draft genome sequence and annotation of a multidrug-resistant E. coli ST1193 strain obtained from a wastewater treatment plant in Austria.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 155 Strain Isolated from Sewage in Kerala, India

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Amrita Salim ◽  
Pradeesh Babu ◽  
Keerthi Mohan ◽  
Manju Moorthy ◽  
Devika Raj ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Comparative Genomic Analysis ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Comparative Genomic ◽  
Content Type ◽  
E Coli

ABSTRACT We report the draft genome sequence of Escherichia coli ASBT-1, a representative of E. coli sequence type 155 (ST155), obtained from India. Considering the known wide variety of pathogenic and antibiotic resistance potentials, this strain should be of great interest for detailed comparative genomic analysis.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 410 Isolate Harboring blaNDM-5 Genes with gyrA and parE Mutations, Isolated from Urine Culture in China

2019 ◽  
Vol 8 (50) ◽  
Author(s):  
Junwei Huang ◽  
Shanshan Ma ◽  
Qian Yu ◽  
Miao Fu ◽  
Lingli Shao
Keyword(s):  
Escherichia Coli ◽  
High Risk ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Urine Culture ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Content Type

Escherichia coli sequence type 410 (ST410) is now an international high-risk clone and is responsible for a large number of clinical infections. Here, we report the draft genome sequence of an ST410 clinical isolate harboring multiple bla NDM-5 genes that was obtained from urine culture in China.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 420 Isolate from a Patient with Urinary Tract Infection in Northern California

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Yusuke Matsui ◽  
Yuan Hu ◽  
Nicole J. Tarlton ◽  
Lee W. Riley
Keyword(s):  
Escherichia Coli ◽  
Urinary Tract Infection ◽  
Urinary Tract ◽  
Tract Infection ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Northern California ◽  
Content Type

ABSTRACT The genome sequence of a uropathogenic Escherichia coli sequence type 420 strain isolated from a patient with urinary tract infection in northern California is described here. The draft genome sequence includes a 4.8-Mb chromosome, accompanied by a 114-kb plasmid containing IncFIB/IncFII/Col156 and a 35-kb plasmid containing IncN3.

scholarly journals Draft Genome Sequence of Escherichia coli W26, an Enteric Strain Isolated from Cow Feces

2012 ◽  
Vol 194 (18) ◽  
pp. 5149-5150 ◽  
Author(s):  
Mincheol Kim ◽  
Hana Yi ◽  
Yong-Joon Cho ◽  
Jeonghwan Jang ◽  
Hor-Gil Hur ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
South Korea ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Enteric Bacterium ◽  
Content Type ◽  
E Coli

ABSTRACTAn enteric bacterium,Escherichia coliW26 (KACC 16630), was isolated from feces from a healthy cow in South Korea. Here, we report the draft genome sequence of the isolate, which is closely affiliated with commensal strains belonging toE. coliphylogroup B1.

scholarly journals Draft Genome Sequence of the First New Delhi Metallo-β-Lactamase (NDM-1)-Producing Escherichia coli Strain Isolated in Peru

2018 ◽  
Vol 6 (13) ◽  
Author(s):  
Jesus Tamariz ◽  
Carlos Llanos ◽  
Carlos Seas ◽  
Paola Montenegro ◽  
Jose Lagos ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
New Delhi ◽  
Content Type ◽  
Clinically Significant

ABSTRACT We present here the draft genome sequence of the first New Delhi metallo-β-lactamase (NDM-1)-producing Escherichia coli strain, belonging to sequence type 155 (ST155), isolated in Peru. Assembly of this draft genome resulted in 5,061,184 bp, revealing a clinically significant resistome for β-lactams, aminoglycosides, tetracyclines, phenicols, sulfonamides, trimethoprim, and fluoroquinolones.

scholarly journals Complete Draft Genome Sequence of Escherichia coli K802

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Gabriele R. M. Kleiner-Grote ◽  
Daniel Wibberg ◽  
Anika Winkler ◽  
Jörn Kalinowski ◽  
Karl Friehs
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Recombinant Proteins ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
E Coli

ABSTRACT Escherichia coli K802 is an old strain used for cloning experiments, as well as for the production of recombinant proteins. To understand the genomic background of E. coli K802 better, we present here its complete draft genome sequence.

scholarly journals Draft Genome Sequence of Escherichia coli Strain Tj, Isolated from the Varzob River in Tajikistan

2020 ◽  
Vol 9 (41) ◽  
Author(s):  
Munavvara Dzhuraeva ◽  
Mehrangez Shokirova ◽  
Ani Azaryan ◽  
Hovik Panosyan ◽  
Khursheda Bobodzhanova ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
Gene Encoding ◽  
Content Type ◽  
E Coli ◽  
Lambdoid Phage ◽  
Specific Phage

ABSTRACT The 4.6-Mbp draft genome sequence of Escherichia coli strain Tj, isolated from the Varzob River in Tajikistan, is presented. This strain possesses four prophage elements related to Shigella phage SfV, E. coli O157:H7-specific phage ϕV10, lambdoid phage HK225, and coliphage Ayreon. It contains a gene encoding a hemolysin E toxin.

scholarly journals Draft Genome Sequence of Escherichia coli AI27, a Porcine Isolate Belonging to Phylogenetic Group B1

2012 ◽  
Vol 194 (23) ◽  
pp. 6640-6641 ◽  
Author(s):  
Kihyun Lee ◽  
Hana Yi ◽  
Yong-Joon Cho ◽  
Jeonghwan Jang ◽  
Hor-Gil Hur ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Phylogenetic Group ◽  
Draft Genome Sequence ◽  
Porcine Strain ◽  
Content Type ◽  
E Coli ◽  
Commensal Strain

ABSTRACTEscherichia coliAI27 is a putatively commensal strain isolated from feces of a pig. Here we report the draft genome sequence ofE. coliAI27. This is the first porcine strain in the phylogenetic group B1 whose genome sequence has been determined.

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