scholarly journals Complete Genome Sequences of 14 Salmonella enterica Serovar Enteritidis Strains Recovered from Human Clinical Cases between 1949 and 1995 in the United States

2018 ◽  
Vol 6 (1) ◽  
Author(s):  
Daniel A. Tadesse ◽  
Maria Hoffmann ◽  
Saul Sarria ◽  
Claudia Lam ◽  
Eric Brown ◽  
...  
Keyword(s):  
United States ◽  
Foodborne Pathogens ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Salmonella Enterica Serovar Enteritidis ◽  
Poultry Products ◽  
Clinical Cases

ABSTRACT Salmonella enterica serovar Enteritidis is one of the most commonly isolated foodborne pathogens and is transmitted primarily to humans through consumption of contaminated poultry and poultry products. We are reporting completely closed genome and plasmid sequences of historical S. Enteritidis isolates recovered from humans between 1949 and 1995 in the United States.

scholarly journals Complete Genome Sequences of Four Salmonella enterica subsp. enterica Serovar Senftenberg and Montevideo Isolates Associated with a 2016 Multistate Outbreak in the United States

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Julie Haendiges ◽  
Tyann Blessington ◽  
Jie Zheng ◽  
Gordon Davidson ◽  
Jesse D. Miller ◽  
...  
Keyword(s):  
United States ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Content Type ◽  
Pistachio Nuts

A multistate outbreak of 11 Salmonella infections linked to pistachio nuts occurred in 2016. In this announcement, we report the complete genome sequences of four Salmonella enterica subsp.

scholarly journals Complete Genome Sequences of Three Salmonella enterica subsp. enterica Serovar Saintpaul Isolates Associated with a 2013 Multistate Outbreak in the United States

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Kuan Yao ◽  
Tim Muruvanda ◽  
Marc W. Allard ◽  
Maria Hoffmann
Keyword(s):  
United States ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Content Type

ABSTRACT In 2013, a multistate outbreak of Salmonella enterica subsp. enterica serovar Saintpaul from cucumber caused 84 cases of salmonellosis in the United States. In this announcement, we report the complete genome sequences of three clinical Salmonella Saintpaul isolates associated with the 2013 outbreak.

scholarly journals Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Rebecca L. Lindsey ◽  
Kristen Knipe ◽  
Lori Rowe ◽  
Lisley Garcia-Toledo ◽  
Vladimir Loparev ◽  
...  
Keyword(s):  
United States ◽  
Escherichia Coli ◽  
Shiga Toxin ◽  
Complete Genome ◽  
Foodborne Pathogen ◽  
The United States ◽  
Whole Genome ◽  
Genome Sequences ◽  
Clinical Cases

Shiga toxin-producing Escherichia coli (STEC) is an important foodborne pathogen. Here, we report complete whole-genome sequences for two STEC strains of serotypes O119:H4 and O165:H25 isolated from clinical cases in the United States.

scholarly journals Complete Genome Sequences of Mycobacteriophages OKaNui and DroogsArmy

2020 ◽  
Vol 9 (33) ◽  
Author(s):  
Kayla M. Fast ◽  
Kadaisha G. Johnson ◽  
Kaitlyn N. Mayfield ◽  
Leah A. Stephens ◽  
T. Hunter Reid ◽  
...  
Keyword(s):  
United States ◽  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Bacterial Host ◽  
Content Type

ABSTRACT Mycobacteriophages OKaNui and DroogsArmy were isolated from soil using the bacterial host Mycobacterium smegmatis mc2155, which belongs to the phylum Actinobacteria. OKaNui was discovered in east Mississippi and DroogsArmy in west Alabama in the United States. The genomes of OKaNui and DroogsArmy were 51,424 bp and 53,254 bp long, respectively.

scholarly journals Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes

2018 ◽  
Vol 6 (6) ◽  
pp. e00007-18 ◽  
Author(s):  
Preeti Chhabra ◽  
Kshama Aswath ◽  
Nikail Collins ◽  
Tahmeed Ahmed ◽  
Maribel Paredes Olórtegui ◽  
...  
Keyword(s):  
United States ◽  
Acute Gastroenteritis ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Stool Samples ◽  
Genotype Ii

ABSTRACTWe report here the near-complete genome sequences of 13 norovirus strains detected in stool samples from patients with acute gastroenteritis from Bangladesh, Ecuador, Guatemala, Peru, Nicaragua, and the United States that are classified into one existing (genotype II.22 [GII.22]), 3 novel (GII.23, GII.24 and GII.25), and 3 tentative novel (GII.NA1, GII.NA2, and GII.NA3) genotypes.

scholarly journals Draft Genome Sequences of Two Salmonella enterica Strains Isolated from Sprouted Chia and Flax Seed Powders

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Jennifer Ronholm ◽  
Nicholas Petronella ◽  
Sandeep Tamber
Keyword(s):  
United States ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
The United States ◽  
Whole Genome ◽  
Flax Seed ◽  
Genome Sequences ◽  
Chia Seed ◽  
First Time

A 2014 foodborne salmonellosis outbreak in Canada and the United States implicated, for the first time, sprouted chia seed powder as the vehicle of transmission. Here, we report the draft whole genome sequences of two Salmonella enterica strains isolated from sprouted powders related to the aforementioned outbreak.

scholarly journals Coding-Complete Genome Sequences of Emerging Rabbit Hemorrhagic Disease Virus Type 2 Isolates Detected in 2020 in the United States

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
V. K. O’Donnell ◽  
L. Xu ◽  
K. Moran ◽  
F. Mohamed ◽  
T. Boston ◽  
...  
Keyword(s):  
United States ◽  
Disease Virus ◽  
Complete Genome ◽  
The United States ◽  
Rabbit Hemorrhagic Disease Virus ◽  
Hemorrhagic Disease ◽  
Genome Sequences ◽  
Rabbit Hemorrhagic Disease ◽  
Disease Virus Type

ABSTRACT Five rabbit hemorrhagic disease virus type 2 (RHDV2) coding-complete genome sequences were obtained from the livers of domestic and wild rabbits during the 2020 outbreak in the United States. These represent the first available RHDV2 sequences from the United States.

scholarly journals Near-Complete Genome Sequences of Vesicular Stomatitis Virus Isolates from the 2020 Outbreak in Kansas

2021 ◽  
Vol 10 (7) ◽  
Author(s):  
Tyler Doerksen ◽  
Edward Bird ◽  
Jamie Henningson ◽  
Rachel Palinski
Keyword(s):  
United States ◽  
Vesicular Stomatitis Virus ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Vesicular Stomatitis ◽  
Virus Isolates

ABSTRACT Here, we report the near-complete genome sequences of vesicular stomatitis virus (VSV) serotype Indiana isolates from the 2020 U.S. outbreak. The sequences were obtained from swabs collected from Kansas horses in July and August. The four genome sequences help improve our understanding of VSV outbreak dynamics in the United States.

scholarly journals Complete Genome Sequences of Monongahela Hantavirus from Pennsylvania, USA

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
César G. Albariño ◽  
Lisa Wiggleton Guerrero ◽  
Ayan K. Chakrabarti ◽  
Pierre E. Rollin ◽  
Stuart T. Nichol
Keyword(s):  
United States ◽  
West Virginia ◽  
Complete Genome ◽  
Clinical Case ◽  
The United States ◽  
Hantavirus Pulmonary Syndrome ◽  
Deer Mice ◽  
Genome Sequences ◽  
Complete Sequences

Monongahela hantavirus was first identified in deer mice and was later found responsible for hantavirus pulmonary syndrome cases in Pennsylvania and West Virginia in the United States. Here, we report the complete sequences of Monongahela virus S, M, and L genomic segments obtained from a fatal clinical case reported in 1997.

scholarly journals Complete Genome Sequences of Two Avilamycin-Resistant Enterococcus faecium Strains Isolated from Chicken in the United States

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
S. Zhao ◽  
C. Li ◽  
S. Mukherjee ◽  
C. H. Hsu ◽  
R. Singh ◽  
...  
Keyword(s):  
United States ◽  
Enterococcus Faecium ◽  
Complete Genome ◽  
The United States ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Content Type ◽  
Young Chicken

Avilamycin-resistant Enterococcus spp. have never been reported in the United States. Here, we report the complete genome sequences of two avilamycin-resistant (Avir) Enterococcus faecium strains isolated from a retail chicken and a cecal sample from a young chicken. Both isolates are multidrug resistant (MDR) and carry emtA on MDR plasmids.

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