scholarly journals Whole-Genome Sequence of an Isogenic Haploid Strain, Saccharomyces cerevisiae IR-2idA30(MATa), Established from the Industrial Diploid Strain IR-2

2019 ◽  
Vol 8 (17) ◽  
Author(s):  
Kazuhiro E. Fujimori ◽  
Yosuke Kobayashi ◽  
Taisuke Seike ◽  
Takehiko Sahara ◽  
Satoru Ohgiya ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Diploid Strain ◽  
Haploid Strain ◽  
Content Type ◽  
Sequencing Errors ◽  
Long Reads

We present the draft genome sequence of an isogenic haploid strain, IR-2idA30(MAT a), established from Saccharomyces cerevisiae IR-2. Assembly of long reads and previously obtained contigs from the genome of diploid IR-2 resulted in 50 contigs, and the variations and sequencing errors were corrected by short reads.

scholarly journals Whole-Genome Sequence of Monascus purpureus GB-01, an Industrial Strain for Food Colorant Production

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Toshitaka Kumagai ◽  
Masatoshi Tsukahara ◽  
Naoya Katayama ◽  
Katsuro Yaoi ◽  
Sachiyo Aburatani ◽  
...  
Keyword(s):  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Monascus Purpureus ◽  
Whole Genome Sequence ◽  
Industrial Strain ◽  
Content Type ◽  
Sequencing Errors ◽  
Food Colorant ◽  
Long Reads

We report the draft genome sequence of Monascus purpureus GB-01, an industrial strain used as a food colorant. De novo assembly of long reads resulted in 121 chromosomal contigs and 1 mitochondrial contig, and sequencing errors were corrected by paired-end short reads. This genome sequence will provide useful information for azaphilone pigments and mycotoxin citrinin biosynthesis.

scholarly journals Draft Genome Sequence of Acholeplasma laidlawii Isolated from the Conjunctiva of a Heifer with Infectious Bovine Keratoconjunctivitis

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Gloria Gioia ◽  
Maria F. Addis ◽  
Laura B. Goodman ◽  
Patrick K. Mitchell ◽  
Belinda Thompson ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Infectious Bovine Keratoconjunctivitis ◽  
Acholeplasma Laidlawii

ABSTRACT Acholeplasma laidlawii can be isolated from cattle environments and different body sites of bovines. It is still under evaluation if A. laidlawii acts as a primary pathogen. Here, we present the whole-genome sequence of A. laidlawii isolated from the conjunctiva of a heifer with infectious bovine keratoconjunctivitis.

scholarly journals Draft Genome Sequence of the Green Alga Scenedesmus acuminatus SAG 38.81

2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Yekaterina Astafyeva ◽  
Malik Alawi ◽  
Daniela Indenbirken ◽  
Dominik Danso ◽  
Adam Grundhoff ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Genome Sequence ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Green Microalga ◽  
Scenedesmus Acuminatus ◽  
Valuable Compounds ◽  
Β Carotene

ABSTRACT Scenedesmus acuminatus, also known as Tetradesmus acuminatus, is a promising green microalga for sustainable production of microalga products, including valuable compounds such as astaxanthin, β-carotene, and lutein, polysaccharides such as β-glucan, and polyunsaturated fatty acids. Here, we report the draft whole-genome sequence of Scenedesmus acuminatus SAG 38.81.

scholarly journals Draft Genome Sequence of Streptococcus suis S10, a Virulent Strain Used in Experimental Pig Infections

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Rogier A. Gaiser ◽  
Aldert L. Zomer ◽  
Jerry M. Wells ◽  
Peter van Baarlen
Keyword(s):  
Infectious Diseases ◽  
Genome Sequence ◽  
Virulent Strain ◽  
Draft Genome ◽  
Streptococcus Suis ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Highly Virulent

Here, we report the draft whole-genome sequence of Streptococcus suis strain S10, isolated from the tonsils of a healthy pig. S. suis S10 belongs to the highly virulent serotype 2, which includes isolates that cause infectious diseases, including meningitis, in pigs and human.

scholarly journals Whole-Genome Sequence of Pseudomonas aeruginosa Strain 4014, Isolated from Soil in France

2018 ◽  
Vol 7 (10) ◽  
Author(s):  
Julien Crovadore ◽  
Damien Grizard ◽  
Romain Chablais ◽  
Bastien Cochard ◽  
Philippe Blanc ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Human Pathogen ◽  
Content Type ◽  
Multiple Antibiotics

We report here the draft genome sequence of strain 4014 of Pseudomonas aeruginosa, a common human pathogen, isolated from soil in France. This sequence predicts resistance to multiple antibiotics, including vancomycin.

scholarly journals Insights from the Genome Sequence of Quorum-Quenching Staphylococcus sp. Strain AL1, Isolated from Traditional Chinese Soy Sauce Brine Fermentation

2012 ◽  
Vol 194 (23) ◽  
pp. 6611-6612 ◽  
Author(s):  
Teik-Min Chong ◽  
Hun-Jiat Tung ◽  
Wai-Fong Yin ◽  
Kok-Gan Chan
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Quorum Quenching ◽  
Soy Sauce ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Homoserine Lactones ◽  
Acyl Homoserine Lactones

ABSTRACTWe report the draft genome sequence ofStaphylococcussp. strain AL1, which degrades quorum-sensing molecules (namely,N-acyl homoserine lactones). To the best of our knowledge, this is the first documentation that reports the whole genome sequence and quorum-quenching activity ofStaphylococcussp. strain AL1.

scholarly journals Whole-Genome Sequence of a Megasphaera elsdenii Strain Isolated from the Gut of a Healthy Indian Adult Subject

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Satyabrata Bag ◽  
Tarini Shankar Ghosh ◽  
Bhabatosh Das
Keyword(s):  
Stool Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Adult Subject ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Indian Subject ◽  
Content Type ◽  
Megasphaera Elsdenii

ABSTRACT Megasphaera elsdenii has been previously reported in the gut of ruminating animals. Its role as an animal probiotic is being investigated, specifically from the perspective of enhancing animal productivity. Herein, we report the draft genome sequence of M. elsdenii strain indica isolated from the stool sample of a healthy Indian subject.

scholarly journals Draft Genome Sequence of Lactiplantibacillus pentosus AWA1501, Isolated from Awa-bancha

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
F. Ito ◽  
R. Niwa ◽  
Y. Syaputri ◽  
Y. Ikagawa ◽  
T. Mizuno ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Dna Sequences ◽  
Fermentation Process ◽  
Anaerobic Fermentation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

Lactiplantibacillus pentosus AWA1501 was isolated from the traditional Japanese tea Awa-bancha. Previous studies have reported that this species becomes predominant after the anaerobic fermentation process. In this study, we report the whole-genome sequence of this strain. The draft genome sequence comprises 3,714,221 nucleotides and 3,374 coding DNA sequences, with an average G+C content of 46.02%.

scholarly journals Draft Genome Sequence of the Histamine-Producing Bacterium Enterobacter kobei Strain 42-12

2019 ◽  
Vol 8 (33) ◽  
Author(s):  
Chihiro Ohshima ◽  
Fumina Sato ◽  
Hajime Takahashi ◽  
Takashi Kuda ◽  
Bon Kimura ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Food Poisoning ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Edible Portion ◽  
Dried Fish

Bacterially produced histamine in food can be a cause of food poisoning. The whole-genome sequence is described for one histamine-producing Enterobacter kobei 42-12 isolate from the edible portion of salted, dried fish.

scholarly journals Whole-Genome Sequence of Brevibacillus borstelensis SDM, Isolated from a Sorghum-Adapted Microbial Community

2020 ◽  
Vol 9 (48) ◽  
Author(s):  
Martina Aulitto ◽  
Lauren M. Tom ◽  
Javier A. Ceja-Navarro ◽  
Blake A. Simmons ◽  
Steven W. Singer
Keyword(s):  
Microbial Community ◽  
Genome Sequence ◽  
Environmental Samples ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Compost Sample

ABSTRACT The isolation of novel microbes from environmental samples continues to be a key strategy for the discovery of new metabolic capacities for the degradation and transformation of lignocellulose. We report the draft genome sequence of a new strain of Brevibacillus borstelensis isolated from a sorghum-adapted microbial community derived from a compost sample.

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