scholarly journals Complete Genome Sequence of Escherichia coli Podophage Peacock

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Erin Ruhlman ◽  
Ryan Bockoven ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Intestinal Tract ◽  
Commensal Bacterium ◽  
Content Type ◽  
E Coli

Escherichia coli is typically a commensal bacterium of the mammalian intestinal tract. Here, the isolation and annotation of the 39,233-bp T7-like E. coli podophage Peacock genome are described.

scholarly journals Complete Genome Sequence of Escherichia coli Siphophage Snoke

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
James E. Corban ◽  
Jacob Gramer ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Negative Bacterium ◽  
Protein Coding ◽  
Gram Negative ◽  
Content Type ◽  
E Coli ◽  
Protein Coding Genes

Escherichia coli is a Gram-negative bacterium often found in animal intestinal tracts. Here, we present the genome of the Guernseyvirinae-like E. coli 4s siphophage Snoke. The 44.4-kb genome contains 81 protein-coding genes, for which 33 functions were predicted. The capsid morphogenesis gene in Snoke contains a large intein.

scholarly journals Complete Genome Sequence of Escherichia-Infecting Phage CEC_KAZ_2018, Isolated from Soil

2019 ◽  
Vol 8 (36) ◽  
Author(s):  
Yergali S. Moldakhanov ◽  
Madina S. Alexyuk ◽  
Andrey P. Bogoyavlenskiy ◽  
Pavel G. Alexyuk ◽  
Aizhan S. Turmagambetova ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Poultry Industry ◽  
Content Type ◽  
E Coli ◽  
Phage Preparation

Avian pathogenic Escherichia coli (APEC) bacteria are one of the main problems of the poultry industry. An effective way to combat colibacillosis is to use a phage preparation that lyses the bacteria. Here, we report the isolation of an E. coli-infecting phage, CEC_KAZ_2018, isolated from soil.

scholarly journals Complete Genome Sequence of a Carbapenem-Resistant Escherichia coli Isolate with blaNDM-5 from a Dog in the United States

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Gregory H. Tyson ◽  
Cong Li ◽  
Olgica Ceric ◽  
Renate Reimschuessel ◽  
Stephen Cole ◽  
...  
Keyword(s):  
United States ◽  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Carbapenem Resistance ◽  
The United States ◽  
Multidrug Resistant ◽  
Content Type ◽  
E Coli

The carbapenem resistance gene bla NDM-5 was identified in an Escherichia coli strain isolated from a dog. We report here the complete genome sequence of this E. coli strain; the bla NDM-5 gene was present on a large IncFII multidrug-resistant plasmid. This is the first bla NDM-5-carrying E. coli strain from an animal in the United States.

scholarly journals Complete Genome Sequence of Escherichia coli J53, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Yasufumi Matsumura ◽  
Gisele Peirano ◽  
Johann D. D. Pitout
Keyword(s):  
Escherichia Coli ◽  
Genetic Analysis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Laboratory Strain ◽  
Content Type ◽  
E Coli ◽  
K 12

ABSTRACT We report here the complete genome sequence of Escherichia coli J53, which is used as a recipient in conjugation experiments and is a laboratory strain derived from E. coli K-12. This genome sequence will help in the development of a comprehensive genetic analysis of conjugative elements.

scholarly journals Complete Genome Sequence of Escherichia coli ME8067, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Yasufumi Matsumura ◽  
Masaki Yamamoto ◽  
Satoshi Nakano ◽  
Miki Nagao
Keyword(s):  
Escherichia Coli ◽  
Genetic Analysis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Laboratory Strain ◽  
Content Type ◽  
E Coli ◽  
K 12

ABSTRACT We report here the complete genome sequence of Escherichia coli ME8067, an azide-resistant laboratory strain used for conjugation experiments. The ME8067 genome was closely related to E. coli strain K-12 substrain W3110. This genome sequence will support further genetic analysis of conjugative elements.

scholarly journals Complete Genome Sequence of Escherichia coli Phage vB_EcoM_Alf5

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Laurynas Alijošius ◽  
Eugenijus Šimoliūnas ◽  
Laura Kaliniene ◽  
Rolandas Meškys ◽  
Lidija Truncaitė
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Molecular Level ◽  
Content Type ◽  
E Coli ◽  
Functional Studies ◽  
K 12 ◽  
Escherichia Coli Phage

ABSTRACT Here, we announce the complete genome sequence of the Escherichia coli myophage vB_EcoM_Alf5 belonging to the genus Felixo1virus, whose members have not been comprehensively studied at the molecular level. Phage vB_EcoM_Alf5 infects E. coli K-12-derived laboratory strains and therefore is well suited for functional studies.

scholarly journals Complete Genome Sequence of the Wild-Type Commensal Escherichia coli Strain SE15, Belonging to Phylogenetic Group B2

2009 ◽  
Vol 192 (4) ◽  
pp. 1165-1166 ◽  
Author(s):  
Hidehiro Toh ◽  
Kenshiro Oshima ◽  
Atsushi Toyoda ◽  
Yoshitoshi Ogura ◽  
Tadasuke Ooka ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Healthy Adult ◽  
Coli Strain ◽  
Phylogenetic Group ◽  
Wild Type ◽  
Commensal Bacterium ◽  
E Coli

ABSTRACT Escherichia coli SE15 (O150:H5) is a human commensal bacterium recently isolated from feces of a healthy adult and classified into E. coli phylogenetic group B2, which includes the majority of extraintestinal pathogenic E. coli. Here, we report the finished and annotated genome sequence of this organism.

scholarly journals Complete Genome Sequence of the Neonatal Meningitis Escherichia coli Serotype O18:K1 Strain NMEC15

2021 ◽  
Vol 10 (38) ◽  
Author(s):  
Aline L. de Oliveira ◽  
Timothy J. Johnson ◽  
Nicolle L. Barbieri ◽  
Lisa K. Nolan ◽  
Catherine M. Logue
Keyword(s):  
Escherichia Coli ◽  
Cerebrospinal Fluid ◽  
The Netherlands ◽  
Bacterial Meningitis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Neonatal Meningitis ◽  
Content Type ◽  
E Coli

Neonatal meningitis E. coli (NMEC) is the second leading cause of sepsis and meningitis in neonates worldwide. Here, we report the genome sequence of NMEC15, belonging to serotype O18:K1, isolated from the cerebrospinal fluid (CSF) of an infant with neonatal bacterial meningitis (NBM) in the Netherlands.

scholarly journals Complete Genome Sequence of blaCTX-M-27-Encoding Escherichia coli Strain H105 of Sequence Type 131 Lineage C1/H30R

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Hiren Ghosh ◽  
Boyke Bunk ◽  
Swapnil Doijad ◽  
Judith Schmiedel ◽  
Linda Falgenhauer ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Coli Strain ◽  
Sequence Type ◽  
Content Type ◽  
E Coli ◽  
Extended Spectrum ◽  
Rate Of Increase

ABSTRACT Escherichia coli sequence type 131 (ST131) is the most frequent antimicrobial-resistant lineage of E. coli, propagating extended-spectrum β-lactamases (ESBL) worldwide. Recently, an alarming rate of increase in isolates of the sublineage C1/H30R-bla CTX-M-27 of ST131 in geographically distant countries was reported. Here, we present the complete genome sequence of the ST131 sublineage C1/H30R E. coli isolate harboring bla CTX-M-27 from Germany.

scholarly journals Complete Genome Sequence of Escherichia Phage OSYSP

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Mustafa Yesil ◽  
En Huang ◽  
Xu Yang ◽  
Ahmed E. Yousef
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Municipal Wastewater ◽  
Biocontrol Agent ◽  
Content Type ◽  
E Coli ◽  
Therapeutic Applications ◽  
Genetic Features

ABSTRACT Bacteriophage OSYSP is a new anti-Escherichia coli O157:H7 phage isolated from municipal wastewater in Ohio. OSYSP is potent against enterohemorrhagic E. coli and is a candidate biocontrol agent for food and therapeutic applications. In this paper, we present the important genetic features of this phage based on its complete genome sequence.

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