Isotopically labeled peptides provide site-resolved structural data with infrared spectra. Probing the structural limit of optical spectroscopy

Author(s):  
Timothy A. Keiderling ◽  
Rong Huang ◽  
Jan Kubelka ◽  
Petr Bouř ◽  
Vladimír Setnička ◽  
...  
1990 ◽  
Vol 68 (2) ◽  
pp. 267-271 ◽  
Author(s):  
Thomas Eggimann ◽  
Tracy L. Smithson ◽  
Hal Wieser ◽  
Primož Lorenčak ◽  
Pamela Bergquist ◽  
...  

The structure of 8-oxabicyclo[3.2.1]octane was calculated by abinitio means at the STO-3G level, and the structural data used to assign the microwave spectrum of the title compound in the range of 26.5 to 40 GHz fitting 144 lines up to J = 48 by adjusting the rotational and three centrifugal distortion constants in the Watson A reduction. Structural parameters were deduced from the rotational constants by allowing all bond lengths and angles to vary in a least-squares manner. These parameters were in good agreement with those calculated at the STO-3G and 3-21G levels. Of many satellite lines observed, only the most intense could be utilized for locating the two lowest fundamental vibrations, estimated to occur at 190 and 240 cm−1. The far-infrared spectrum is reported in the region of 80 to 300 cm−1, exhibiting only one distinct sequence of Q branches at 264 cm−1. On the basis of unsealed abinitio force fields at both levels of the theory the corresponding fundamentals are assigned, respectively, to a twisting (A″) and a bending (A′) of the cycloheptane ring. Keywords: 8-oxabicyclo[3.2.1]octane, microwave and far-infrared spectra, abinitio STO-3G and 3-21G geometries.


2012 ◽  
Vol 8 (S290) ◽  
pp. 267-268
Author(s):  
Yuan Liu ◽  
Jin Zhang ◽  
Shuang-Nan Zhang

AbstractSome abnormal AGNs are discovered in the SDSS data recently. The usual UV/optical emission lines are exceptionally weak in their UV/optical spectroscopy, though the shapes and luminosities of their continua are comparable with that of the normal AGNs. We investigated the optical variations and the near-infrared spectra of these weak emission-line AGNs. We propose that these AGNs can be interpreted as the early stage of an active cycle of AGNs.


Author(s):  
K. H. Downing ◽  
S. G. Wolf ◽  
E. Nogales

Microtubules are involved in a host of critical cell activities, many of which involve transport of organelles through the cell. Different sets of microtubules appear to form during the cell cycle for different functions. Knowledge of the structure of tubulin will be necessary in order to understand the various functional mechanisms of microtubule assemble, disassembly, and interaction with other molecules, but tubulin has so far resisted crystallization for x-ray diffraction studies. Fortuitously, in the presence of zinc ions, tubulin also forms two-dimensional, crystalline sheets that are ideally suited for study by electron microscopy. We have refined procedures for forming the sheets and preparing them for EM, and have been able to obtain high-resolution structural data that sheds light on the formation and stabilization of microtubules, and even the interaction with a therapeutic drug.Tubulin sheets had been extensively studied in negative stain, demonstrating that the same protofilament structure was formed in the sheets and microtubules. For high resolution studies, we have found that the sheets embedded in either glucose or tannin diffract to around 3 Å.


Author(s):  
S. Wang ◽  
P. R. Buseck

Valleriite is an unusual mineral, consisting of intergrowths of sulfide layers (corresponding in structure to the mineral smythite - Fe9S11) and hydroxide layers (corresponding to brucite - Mg(OH2)). It has a composition of approximately 1.526[Mg.68Al.32(OH)2].[Fe1.07Cu.93S2] and consists of two interpenetrating lattices, each of which retains its individual structural and diffraction characteristics parallel to the layering. The valleriite structure is related to that of tochilinite, an unusual iron-rich mineral that is of considerable interest for the origin of certain carbonaceous chondrite meteorites and to those of franckeite and cylindrite, two minerals that are of interest because of their unique morphological and crystallographic properties, e.g., the distinctive curved form of cylindrite and the perfect mica-like cleavage with unusual striations and the long-period wavy structure of franckeite.Our selected-area electron diffraction (SAED) patterns and high-resolution transmission electron microscope (HRTEM) images of valleriite provide new structural data. A basic structure and a new superstructure have been observed.


2002 ◽  
Vol 69 ◽  
pp. 117-134 ◽  
Author(s):  
Stuart M. Haslam ◽  
David Gems ◽  
Howard R. Morris ◽  
Anne Dell

There is no doubt that the immense amount of information that is being generated by the initial sequencing and secondary interrogation of various genomes will change the face of glycobiological research. However, a major area of concern is that detailed structural knowledge of the ultimate products of genes that are identified as being involved in glycoconjugate biosynthesis is still limited. This is illustrated clearly by the nematode worm Caenorhabditis elegans, which was the first multicellular organism to have its entire genome sequenced. To date, only limited structural data on the glycosylated molecules of this organism have been reported. Our laboratory is addressing this problem by performing detailed MS structural characterization of the N-linked glycans of C. elegans; high-mannose structures dominate, with only minor amounts of complex-type structures. Novel, highly fucosylated truncated structures are also present which are difucosylated on the proximal N-acetylglucosamine of the chitobiose core as well as containing unusual Fucα1–2Gal1–2Man as peripheral structures. The implications of these results in terms of the identification of ligands for genomically predicted lectins and potential glycosyltransferases are discussed in this chapter. Current knowledge on the glycomes of other model organisms such as Dictyostelium discoideum, Saccharomyces cerevisiae and Drosophila melanogaster is also discussed briefly.


1962 ◽  
Vol 18 (4) ◽  
pp. 1455-1461 ◽  
Author(s):  
M BALDWIN
Keyword(s):  

1981 ◽  
Vol 78 ◽  
pp. 927-932 ◽  
Author(s):  
F.J.C.M. Toolenaar ◽  
G.J. van der Poort ◽  
F. Stoop ◽  
V. Ponec

Author(s):  
Daniel Tabor ◽  
Timothy Zwier ◽  
Joseph Korn ◽  
Daniel Hewett ◽  
Edwin Sibert
Keyword(s):  

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