Apomixis in Tripsacum: Comparative mapping of a multigene phenomenon

Genome ◽  
2001 ◽  
Vol 44 (2) ◽  
pp. 222-230 ◽  
Author(s):  
C A Blakey ◽  
S L Goldman ◽  
C L Dewald
Keyword(s):  
Comparative Mapping ◽  
Seed Set ◽  
Fragment Length Polymorphism ◽  
Grass Species ◽  
Rflp Markers ◽  
Tripsacum Dactyloides ◽  
Maize Chromosome ◽  
Mother Cells ◽  
The Relationship ◽  
Group D

A relationship has been established between the expression of apomixis in natural polyploids of Tripsacum dactyloides and fertility as measured by percent seed set. Thus, fertility may be reliably used as a defining phenotype for apomixis when scoring the progeny from diploid (2n = 2x = 36) × tetraploid (2n = 4x = 72) crosses in Tripsacum. By exploiting the relationship between apomixis and fertility, as defined by seed set, analyses were performed on a set of related second-generation triploid populations segregating for apomixis. These populations were derived from sexual (diploid) × apomictic (tetraploid) crosses. Six out of 25 genome-dispersed restriction fragment length polymorphism (RFLP) markers co-segregate with fertility. Five of these markers were previously reported and include: php20855, tda48, tda53, umc62, and umc83, and are linked to Tripsacum genetic linkage groups F, I, H, L, and A, respectively. Significantly, we report here the syntenic relationships of the maize chromosome intervals to Tripsacum that segregate for numerous meiosis-specific and fertility-associated genes. Utilizing RFLP locus comparative mapping based on conservation of chromosome (genic) regions between related species, it may be concluded that the genes controlling fertility have been preserved in both Tripsacum and maize. A sixth marker, umc166, has also been shown to co-segregate with fertility and is conserved in both grass species. Specifically, umc166 is linked to Tripsacum linkage group D and, by syntenic comparison, to the short arm of maize chromosome 5. Encoded within this marked interval is the gene Ameiotic1 (Am1) whose function is required for the initiation of meiosis in both micro- and megaspore mother cells and whose absence of expression in the female is, in all likelihood, a prerequisite for the expression of apomixis.Key words: Tripsacum, apomixis, diplospory, comparative mapping, Zea.

Comparative Mapping of the Barley Ppd-H1 Photoperiod Response Gene Region, Which Lies Close to a Junction Between Two Rice Linkage Segments

Genetics ◽  
2002 ◽  
Vol 161 (2) ◽  
pp. 825-834
Author(s):  
Roy P Dunford ◽  
Masahiro Yano ◽  
Nori Kurata ◽  
Takuji Sasaki ◽  
Gordon Huestis ◽  
...  
Keyword(s):  
Comparative Mapping ◽  
Distal Part ◽  
Heading Date ◽  
Rice Chromosome ◽  
Photoperiod Response ◽  
Rflp Markers ◽  
Response Gene ◽  
The Relationship ◽  
Equivalent Region ◽  
Search For Homologs

Abstract Comparative mapping of cereals has shown that chromosomes of barley, wheat, and maize can be described in terms of rice “linkage segments.” However, little is known about marker order in the junctions between linkage blocks or whether this will impair comparative analysis of major genes that lie in such regions. We used genetic and physical mapping to investigate the relationship between the distal part of rice chromosome 7L, which contains the Hd2 heading date gene, and the region of barley chromosome 2HS containing the Ppd-H1 photoperiod response gene, which lies near the junction between rice 7 and rice 4 linkage segments. RFLP markers were mapped in maize to identify regions that might contain Hd2 or Ppd-H1 orthologs. Rice provided useful markers for the Ppd-H1 region but comparative mapping was complicated by loss of colinearity and sequence duplications that predated the divergence of rice, maize, and barley. The sequences of cDNA markers were used to search for homologs in the Arabidopsis genome. Homologous sequences were found for 13 out of 16 markers but they were dispersed in Arabidopsis and did not identify any candidate equivalent region. The implications of the results for comparative trait mapping in junction regions are discussed.

scholarly journals A Genetic Map of Gibberella fujikuroi Mating Population A (Fusarium moniliforme)

Genetics ◽  
1996 ◽  
Vol 143 (1) ◽  
pp. 175-189 ◽  
Author(s):  
Jin-rong Xu ◽  
John F Leslie
Keyword(s):  
Fusarium Moniliforme ◽  
Fragment Length Polymorphism ◽  
Fumonisin B1 ◽  
Gibberella Fujikuroi ◽  
Female Sterility ◽  
Rflp Markers ◽  
Linkage Groups ◽  
Mating Population ◽  
Spore Killer ◽  
Chiasma Interference

Abstract We constructed a recombination-based map of the fungal plant pathogen Gibberella fujikuroi mating population A (asexual stage Fusarium moniliforme). The map is based on the segregation of 142 restriction fragment length polymorphism (RFLP) markers, two auxotrophic genes (arg1, nic1), mating type (matA+ / matA−), female sterility (ste1), spore-killer (Sk), and a gene governing the production of the mycotoxin fumonisin B1 (fum1) among 121 random ascospore progeny from a single cross. We identified 12 linkage groups corresponding to the 12 chromosome-sized DNAs previously observed in contour-clamped homogeneous electric field (CHEF) gels. Linkage groups and chromosomes were correlated via Southern blots between appropriate RFLP markers and the CHEF gels. Eleven of the 12 chromosomes are meiotically stable, but the 12th (and smallest) is subject to deletions in 3% (4/121) of the progeny. Positive chiasma interference occurred on five of the 12 chromosomes, and nine of the 12 chromosomes averaged more than one crossover per chromosome. The average kb/cM ratio in this cross is ~32.

CYTOLOGY OF 2n POLLEN FORMATION IN DIPLOID ALFALFA, MEDICAGO SATIVA

1979 ◽  
Vol 21 (4) ◽  
pp. 525-530 ◽  
Author(s):  
Nicholi Vorsa ◽  
E. T. Bingham
Keyword(s):  
Medicago Sativa ◽  
Seed Set ◽  
Pollen Grains ◽  
Genetic Constitution ◽  
2N Pollen ◽  
Diploid Parent ◽  
2N Gamete ◽  
Medicago Sativa L ◽  
Pollen Formation ◽  
Mother Cells

Four diploid (2x) clones of alfalfa, Medicago sativa L., which produced good seed set when used as male parents in 4x-2x crosses were selected for study. The 2x clones descended from 2x haploids of cultivated 4x alfalfa. Fertility in the 4x-2x cross was due to the production of pollen with the unreduced chromosome number (2n pollen) from the 2x parent. The cytological mechanism of 2n pollen formation was found to be disorientation of spindles at metaphase II in up to 38% of the pollen mother cells. Thus, both n and 2n pollen were produced by all four diploids examined. Normal spindles at metaphase II were oriented such that they defined the poles of a tetrahedron and resulted in normal tetrads in a tetrahedral arrangement. Disoriented spindles were basically parallel to each other and resulted in formation of dyads and occasionally a triad. Dyads developed into two 2n pollen grains; triads developed into one 2n and two n pollen grains. Since both n and 2n pollen grains are produced by the diploids, they can be maintained as diploids or they can be used as male parents in crosses to tetraploids. The genetic constitution of 2n pollen resulting from parallel spindles is similar to that expected after first division restitution of meiosis and much of the heterozygosity of the diploid parent is conserved in the gametes. The 2n gamete mechanism has potential application in germplasm transfer and in maximizing heterozygosity in tetraploid hybrids.

Relationship between portal venous and hepatic arterial blood flows: spectrum of response

1990 ◽  
Vol 259 (6) ◽  
pp. G1010-G1018 ◽  
Author(s):  
T. Kawasaki ◽  
F. J. Carmichael ◽  
V. Saldivia ◽  
L. Roldan ◽  
H. Orrego
Keyword(s):  
Blood Flow ◽  
Arterial Blood Flow ◽  
Portal Vein Ligation ◽  
Artery Ligation ◽  
Blood Flows ◽  
Arterial Blood ◽  
Group A ◽  
Group B ◽  
The Relationship ◽  
Group D

The relationship between portal tributary blood flow (PBF) and hepatic arterial blood flow (HAF) was studied in awake, unrestrained rats with the radiolabeled microsphere technique. Six distinct patterns of response emerged. In group A (PBF+, HAF 0), ethanol, acetate, glucagon, prostacyclin, and a mixed diet increased PBF without a change in HAF; in group B (PBF+, HAF+), adenosine and histamine increased both PBF and HAF; in group C (PBF 0, HAF+), isoflurane and triiodothyronine did not change PBF but increased HAF; and in group D (PBF-, HAF+), halothane and vasopressin decreased PBF and increased HAF. Acute partial portal vein ligation decreased PBF (56%) and increased HAF (436%). Hypoxia (7.5% O2) decreased PBF (28%) and increased HAF (110%). In group E (PBF+, HAF-), acute hepatic artery ligation increased PBF (35%) and reduced HAF (74%), while in group F (PBF-, HAF-), thyroidectomy reduced PBF and HAF (36 and 47%, respectively). All blood flow responses were accompanied by the expected changes in both portal tributary and hepatic arterial vascular resistances. The data suggest that the portal and hepatic arterial vascular territories have regulatory mechanisms that allow for independent changes.

Physical mapping of restriction fragment length polymorphism (RFLP) markers in homoeologous groups 1 and 3 chromosomes of wheat by in situ hybridization

Genome ◽  
2001 ◽  
Vol 44 (3) ◽  
pp. 401-412 ◽  
Author(s):  
X -F. Ma ◽  
K Ross ◽  
J P Gustafson
Keyword(s):  
In Situ Hybridization ◽  
Restriction Fragment Length Polymorphism ◽  
Restriction Fragment ◽  
Physical Mapping ◽  
Length Polymorphism ◽  
Fragment Length ◽  
Fragment Length Polymorphism ◽  
Rflp Markers ◽  
Restriction Fragment Length

Using wheat ditelosomic lines and in situ hybridization of biotin-labelled DNA probes, 18 restriction fragment length polymorphism (RFLP) markers were physically located on homoeologous groups 1 and 3 chromosomes of wheat. Most of the markers hybridized to chromosome arms in a physical order concordant with the genetic maps. A majority of the markers studied were clustered in non-C-banded, distal euchromatic areas, indicating the presence of recombination hot spots and cold spots in those regions. However, on 1BS the markers were well dispersed, which could be due to the abundance of heterochromatin throughout the arm. An inversion between Xpsr653 and Xpsr953 was observed on 1AL. One new Xpsr688 locus, approximately 20–26% from the centromere, was found on 1AS and 1BS. The physical location of Xpsr170 on group 3 chromosomes probably represents an alternative to the loci on the genetic map. Finally, Xpsr313 was mapped to two physical loci on 1DL. Five markers were located to bins consistent with the deletion-based physical maps.Key words: wheat, physical mapping, in situ hybridization.

scholarly journals Meiotic Chromosome Behavior and Capsule Setting in Doritaenopsis Hybrids

2008 ◽  
Vol 133 (1) ◽  
pp. 107-116 ◽  
Author(s):  
Pablo Bolaños-Villegas ◽  
Shih-Wen Chin ◽  
Fure-Chyi Chen
Keyword(s):  
Cell Division ◽  
Pollen Mother Cell ◽  
Chromosome Pairing ◽  
Chromosomal Aberrations ◽  
High Frequency ◽  
Mother Cell ◽  
Seed Set ◽  
Pollen Viability ◽  
High Pollen ◽  
Mother Cells

The development of new cultivars in Doritaenopsis Guillaum. & Lami orchids is often hindered by factors such as low seed count in hybrids. Cytological study may offer the ability to develop new hybrids by revealing cultivars with good chromosome pairing and high pollen viability, which are somewhat difficult to obtain under current breeding programs. Cross pollination, pollen viability, and chromosomal behavior during meiosis were analyzed to reveal the relation between seed fertility and capsule set in Doritaenopsis hybrids. The number of mature capsules harvested and their relative seed content were used as indices of crossing availability. The results of meiosis were evaluated according to pollen viability detected by fluorescein diacetate and quantification of sporad types by acid fuchsin staining. Chromosome number and pairing at meiosis were observed in root tips or in samples of pollen mother cells. A positive relation was found among high seed set, high frequency of viable tetrads, high degree of chromosome pairing, and low frequency of chromosomal aberrations such as inversions and translocations. On the basis of these factors, three types of hybrids could be distinguished. In type one hybrids, chromosomes paired as bivalents, pollen mother cells divided into tetrads, and capsule setting occurred after pollination of pollen acceptors. In type two hybrids, chromosomes remained mainly as univalents that developed into micromeiocytes, pollen mother cell division was disrupted, and seed recovery was low after pollination. Type three hybrids showed chromosomes paired mostly as multivalents, chromosome bridges, pollen mother cell division with massive failure, and little fertility. In Doritaenopsis orchids, high pollen viability and high fertility depends on a high frequency of normal tetrads, and low seed set in cross-pollination is predicted with micronuclei in the end products of meiosis. The occurrence of chromosomal aberrations may suggest a process of genome differentiation that could compromise breeding efforts if not taken into consideration.

scholarly journals Inoculation and N Fertilization Affect the Dry Matter, N Fixation, and Bioactive Compounds in Sulla Leaves

Agronomy ◽  
2019 ◽  
Vol 9 (6) ◽  
pp. 289 ◽  
Author(s):  
Leonardo Sulas ◽  
Giuseppe Campesi ◽  
Giovanna Piluzza ◽  
Giovanni A. Re ◽  
Paola A. Deligios ◽  
...  
Keyword(s):  
Bioactive Compounds ◽  
Dry Matter ◽  
Seed Set ◽  
Natural Habitat ◽  
N Fertilization ◽  
N Fixation ◽  
N Application ◽  
Uninoculated Control ◽  
The Relationship ◽  
Leaf N

Sulla (Sulla coronaria [L.] Medik), a Mediterranean short-lived legume with tolerance to drought-prone environments, requires inoculation outside its natural habitat. Its leaves are appreciated for the bromatological composition and content of bioactive compounds. However, no information is available regarding the distinct effects of inoculation and nitrogen (N) applications on leaf dry matter (DM), fixed N, and bioactive compounds. Sulla leaves were sampled from the vegetative stage to seed set in Sardinia (Italy) during 2013–2014 and leaf DM, N content, and fixed N were determined. Compared to the best performing inoculated treatments, DM yield and fixed N values of the control only represented 8% to 20% and 2% to 9%, respectively. A significant relationship between fixed N and leaf DM yield was established, reaching 30 kg fixed N t–1 at seed set. Significant variations in leaf atom% 15N excess and %Ndfa quantified decreases in leaf N fixation coupled with N application. Moreover, the petiole content of phenolic compounds markedly increased in the uninoculated control, suggesting deeper investigations on the relationship between bioactive compounds and inoculation treatments. Results highlighted substantial variation in DM, N yields, N-fixation ability, and content of bioactive compounds of sulla leaves caused by inoculation and N fertilization.

Restriction Fragment Length Polymorphism Assessment of the Heterogeneous Nature of Maize Population GT-MAS:gk and Field Evaluation of Resistance to Aflatoxin Production by Aspergillus flavus

2002 ◽  
Vol 65 (1) ◽  
pp. 167-171 ◽  
Author(s):  
B. Z. GUO ◽  
A. BUTRON ◽  
H. LI ◽  
N. W. WIDSTROM ◽  
R. E. LYNCH
Keyword(s):  
Cluster Analysis ◽  
Restriction Fragment Length Polymorphism ◽  
Length Polymorphism ◽  
Fragment Length Polymorphism ◽  
Field Evaluation ◽  
Aflatoxin Production ◽  
Inbred Lines ◽  
Rflp Markers ◽  
Maize Population ◽  
Restriction Fragment Length

Aflatoxin, produced by Aspergillus flavus, is one of the most toxic and carcinogenic substances known and contaminates many agricultural commodities such as corn, peanuts, cottonseed, and tree nuts. The challenge to breeders/plant pathologists is to identify lines that have resistance to aflatoxin production. Maize population GT-MAS:gk has been identified and released as a germplasm with resistance to aflatoxin contamination. In the present study, we assessed genetic divergence in the GT-MAS:gk population using restriction fragment length polymorphism (RFLP) DNA markers to survey 11 selfed inbred lines and conducted field evaluations for the dissimilarities in aflatoxin production among these inbred lines in comparison with a sister population, GT-MAS:pw,nf. The 11 selfed inbred lines were assayed for DNA polymorphism using 113 RFLP markers in 10 linkage groups covering 1,518.2 centimorgans (cM; unit of gene or chromosome size). Considerable variation among the inbreds was detected with RFLP markers, of which 42 probe-enzyme combinations gave 102 polymorphic bands. Cluster analysis based on genetic similarities revealed associations and variations among the tested lines. Three polymorphic groups were distinguished by cluster analysis. Two years of field evaluation data showed that aflatoxin concentrations among the lines were significantly different in both years (P < 0.001). Maturity data were also different. Thus, this study demonstrates that the maize population GT-MAS:gk is heterogeneous and that individuals may be different in resistance to A. flavus infection and aflatoxin production. Therefore, the most resistant lines should be inbred to increase homogeneity, and resistance should be confirmed through progeny testing.

SELECTION FOR SEED SET IN NONINBRED AND PARTLY INBRED POPULATIONS OF ALFALFA

1977 ◽  
Vol 57 (3) ◽  
pp. 873-881 ◽  
Author(s):  
R. MICHAUD ◽  
T. H. BUSBICE
Keyword(s):  
Medicago Sativa ◽  
Seed Set ◽  
Exponential Model ◽  
Seed Setting ◽  
Medicago Sativa L ◽  
Selection For ◽  
Inbred Populations ◽  
The Relationship ◽  
Advanced Generation ◽  
Coefficient Of Inbreeding

Alfalfa (Medicago sativa L.) is a highly heterozygous cross-pollinating species, and most breeding efforts have been conducted on noninbred populations. The purpose of this study was to determine whether greater breeding progress could be made by selecting within partly inbred populations rather than within noninbred ones. One hundred and twenty F1 (noninbred) and 120 S1 (partly inbred) plants that were issued from crossing and selfing four alfalfa clones were evaluated for self-fertility. The most self-fertile 10% of the plants from each family were selected in each population. The selected plants within each level of inbreeding were intercrossed to produce an advanced generation in which the effectiveness of the selection was evaluated. Selection increased both self- and cross-fertility in the advanced generation. Selection was more effective at the F1 level than at the S1 level. Fertility was reduced drastically by inbreeding. The average self-fertility of the S1’s was only about 7% of the cross-fertility of their parental clones. An exponential model was proposed to describe the relationship between seed setting and the coefficient of inbreeding in the developing zygote. This model explained 95% of the variation among 11 unselected populations having differing levels of inbreeding.

A molecular linkage map of tomato displaying chromosomal locations of resistance gene analogs based on a Lycopersicon esculentum × Lycopersicon hirsutum cross

Genome ◽  
2002 ◽  
Vol 45 (1) ◽  
pp. 133-146 ◽  
Author(s):  
L P Zhang ◽  
A Khan ◽  
D Niño-Liu ◽  
M R Foolad
Keyword(s):  
Disease Resistance ◽  
Restriction Fragment Length Polymorphism ◽  
Fragment Length Polymorphism ◽  
Rflp Markers ◽  
Resistance Gene Analogs ◽  
Lycopersicon Hirsutum ◽  
R Genes ◽  
Molecular Linkage Map ◽  
Tomato Diseases ◽  
Restriction Fragment Length

A molecular linkage map of tomato was constructed based on a BC1 population (N = 145) of a cross between Lycopersicon esculentum Mill. line NC84173 (maternal and recurrent parent) and Lycopersicon hirsutum Humb. and Bonpl. accession PI126445. NC84173 is an advanced breeding line that is resistant to several tomato diseases, not including early blight (EB) and late blight (LB). PI126445 is a self-incompatible accession that is resistant to many tomato diseases, including EB and LB. The map included 142 restriction fragment length polymorphism (RFLP) markers and 29 resistance gene analogs (RGAs). RGA loci were identified by PCR amplification of genomic DNA from the BC1 population, using ten pairs of degenerate oligonucleotide primers designed based on conserved leucine-rich repeat (LRR), nucleotide binding site (NBS), and serine (threonine) protein kinase (PtoKin) domains of known resistance genes (R genes). The PCR-amplified DNAs were separated by denaturing polyacrylamide gel electrophoresis (PAGE), which allowed separation of heterogeneous products and identification and mapping of individual RGA loci. The map spanned 1469 cM of the 12 tomato chromosomes with an average marker distance of 8.6 cM. The RGA loci were mapped to 9 of the 12 tomato chromosomes. Locations of some RGAs coincided with locations of several known tomato R genes or quantitative resistance loci (QRLs), including Cf-1, Cf-4, Cf-9, Cf-ECP2, rx-1, and Cm1.1 (chromosome 1); Tm-1 (chromosome 2); Asc (chrromosme 3); Pto, Fen, and Prf (chromosome 5); OI-1, Mi, Ty-1, Cm6.1, Cf-2, CF-5, Bw-5, and Bw-1 (chromosome 6); I-1, I-3, and Ph-1 (chromosome 7); Tm-2a and Fr1 (chromosome 9); and Lv (chromosome 12). These co-localizations indicate that the RGA loci were either linked to or part of the known R genes. Furthermore, similar to that for many R gene families, several RGA loci were found in clusters, suggesting their potential evolutionary relationship with R genes. Comparisons of the present map with other molecular linkage maps of tomato, including the high density L. esculentum × Lycopersicon pennellii map, indicated that the lengths of the maps and linear order of RFLP markers were in good agreement, though certain chromosomal regions were less consistent than others in terms of the frequency of recombination. The present map provides a basis for identification and mapping of genes and QTLs for disease resistance and other desirable traits in PI126445 and other L. hirsutum accessions, and will be useful for marker-assisted selection and map-based gene cloning in tomato.Key words: disease resistance, genetic marker, molecular map, quantitative trait locus (QTL), restriction fragment length polymorphism (RFLP), RGAs.

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