Temporal Forcing Induced Pattern Transitions Near the Turing–Hopf Bifurcation in a Plankton System

2020 ◽  
Vol 30 (09) ◽  
pp. 2050136
Author(s):  
Wen Wang ◽  
Shutang Liu ◽  
Zhibin Liu ◽  
Da Wang
Keyword(s):  
Hopf Bifurcation ◽  
Periodic Oscillation ◽  
Reaction Diffusion ◽  
Periodic Forcing ◽  
Diffusion Type ◽  
Weakly Nonlinear ◽  
Form Analysis ◽  
The Impact ◽  
Time Periodic ◽  
Theoretical Results

We explore the impact of time-periodic forcing on pattern transitions in a plankton system of reaction–diffusion type. Here, we mainly focus on the forced states near the Turing–Hopf bifurcation. A normal form analysis leads to the finding that weak forcing exhibits a destabilizing effect on the dynamics by exciting the transitions from a spatially homogeneous stationary state to a periodic oscillation in time. The results are obtained by studying the amplitude equations derived using weakly nonlinear analysis in the presence of forcing, which enables us to calculate the changes of states. Examples are given to confirm the theoretical results.

Bifurcations in Twinkling Patterns for the Lengyel–Epstein Reaction–Diffusion Model

2021 ◽  
Vol 31 (11) ◽  
pp. 2150164
Author(s):  
J. Sarría-González ◽  
Ivonne Sgura ◽  
M. R. Ricard
Keyword(s):  
Steady State ◽  
Hopf Bifurcation ◽  
Diffusion Model ◽  
Reaction System ◽  
Reaction Diffusion ◽  
Spatially Inhomogeneous ◽  
Reaction Diffusion Model ◽  
Spatially Homogeneous ◽  
Time Periodic ◽  
Theoretical Results

Conditions for the emergence of strong Turing–Hopf instabilities in the Lengyel–Epstein CIMA reaction–diffusion model are found. Under these conditions, time periodic spatially inhomogeneous solutions can be induced by diffusive instability of the spatially homogeneous limit cycle emerging at a supercritical Bautin–Hopf bifurcation about the unstable steady state of the reaction system. We report numerical simulations by an Alternating Directions Implicit (ADI) method that show the formation of twinkling patterns for a chosen parameter value, thus confirming our theoretical results.

Pattern Formation and Oscillations in Reaction–Diffusion Model with p53-Mdm2 Feedback Loop

2019 ◽  
Vol 29 (14) ◽  
pp. 1930040 ◽  
Author(s):  
Qianqian Zheng ◽  
Jianwei Shen ◽  
Zhijie Wang
Keyword(s):  
Pattern Formation ◽  
Feedback Loop ◽  
Reaction Diffusion ◽  
Vital Role ◽  
Reaction Diffusion Equation ◽  
Biological Mechanism ◽  
Reaction Diffusion Model ◽  
The Impact ◽  
Theoretical Results ◽  
Diffusive System

P53 plays a vital role in DNA repair, and several mathematical models of the p53-Mdm2 feedback loop were used to explain the biological mechanism. In this paper, a p53-Mdm2 model described by a delay reaction–diffusion equation is studied both analytically and numerically. This research aims to provide an understanding of the impact of delay and sustained pressure on the p53-Mdm2 dynamics and tries to explain some biological mechanism. It is found that the type of pattern formation is affected by Hopf bifurcation. Also, the amplitude equation in delay diffusive system is derived and it is shown that sustained stress plays an essential role in the function of p53. Finally, simulation is used to verify the theoretical results.

Persistence, Turing Instability and Hopf Bifurcation in a Diffusive Plankton System with Delay and Quadratic Closure

2016 ◽  
Vol 26 (03) ◽  
pp. 1650047 ◽  
Author(s):  
Jiantao Zhao ◽  
Junjie Wei
Keyword(s):  
Hopf Bifurcation ◽  
Center Manifold ◽  
Sufficient Conditions ◽  
Reaction Diffusion ◽  
Turing Instability ◽  
Positive Equilibrium ◽  
Hopf Bifurcations ◽  
System With Delay ◽  
The Stability ◽  
Theoretical Results

A reaction–diffusion plankton system with delay and quadratic closure term is investigated to study the interactions between phytoplankton and zooplankton. Sufficient conditions independent of diffusion and delay are obtained for the persistence of the system. Our conclusions show that diffusion can induce Turing instability, delay can influence the stability of the positive equilibrium and induce Hopf bifurcations to occur. The computational formulas which determine the properties of bifurcating periodic solutions are given by calculating the normal form on the center manifold, and some numerical simulations are carried out for illustrating the theoretical results.

scholarly journals Pattern formation on a growing oblate spheroid. an application to adult sea urchin development

2021 ◽  
Vol 0 (0) ◽  
pp. 0
Author(s):  
Deborah Lacitignola ◽  
Massimo Frittelli ◽  
Valerio Cusimano ◽  
Andrea De Gaetano
Keyword(s):  
Sea Urchin ◽  
Adult Stage ◽  
Reaction Diffusion ◽  
Oblate Spheroid ◽  
Gene Control ◽  
Control Networks ◽  
Model Driven ◽  
Reaction Diffusion Model ◽  
The Impact ◽  
Theoretical Results

<p style='text-indent:20px;'>In this study, the formation of the adult sea urchin shape is rationalized within the Turing's theory paradigm. The emergence of protrusions from the expanding underlying surface is described through a reaction-diffusion model with Gray-Scott kinetics on a growing oblate spheroid. The case of slow exponential isotropic growth is considered. The model is first studied in terms of the spatially homogenous equilibria and of the bifurcations involved. Turing diffusion-driven instability is shown to occur and the impact of the slow exponential growth on the resulting Turing regions adequately discussed. Numerical investigations validate the theoretical results showing that the combination between an inhibitor and an activator can result in a distribution of spot concentrations that underlies the development of ambulacral tentacles in the sea urchin's adult stage. Our findings pave the way for a model-driven experimentation that could improve the current biological understanding of the gene control networks involved in patterning.</p>

scholarly journals Bifurcating Solutions to the Monodomain Model Equipped with FitzHugh-Nagumo Kinetics

2009 ◽  
Vol 2009 ◽  
pp. 1-17 ◽  
Author(s):  
Robert Artebrant
Keyword(s):  
Hopf Bifurcation ◽  
Numerical Experiments ◽  
Cell Model ◽  
Analytical Techniques ◽  
Reaction Diffusion ◽  
Cell Dynamics ◽  
Hopf Bifurcation Point ◽  
Monodomain Model ◽  
Model Features ◽  
Time Periodic

We study Hopf bifurcation solutions to the Monodomain model equipped with FitzHugh-Nagumo cell dynamics. This reaction-diffusion system plays an important role in the field of electrocardiology as a tractable mathematical model of the electrical activity in the human heart. In our setting the (bounded) spatial domain consists of two subdomains: a collection of automatic cells surrounded by collections of normal cells. Thus, the cell model features a discontinuous coefficient. Analytical techniques are applied to approximate the time-periodic solution that arises at the Hopf bifurcation point. Accurate numerical experiments are employed to complement our findings.

Oscillations Induced by Quiescent Adult Female in a Reaction–Diffusion Model of Wild Aedes Aegypti Mosquitoes

2019 ◽  
Vol 29 (13) ◽  
pp. 1950189 ◽  
Author(s):  
A. Aghriche ◽  
R. Yafia ◽  
M. A. Aziz Alaoui ◽  
A. Tridane ◽  
F. A. Rihan
Keyword(s):  
Hopf Bifurcation ◽  
Time Delay ◽  
Aedes Aegypti ◽  
Center Manifold ◽  
Reaction Diffusion ◽  
Positive Equilibrium ◽  
Reaction Diffusion Model ◽  
The Stability ◽  
Manifold Theory ◽  
Theoretical Results

This paper takes the reaction–diffusion approach to deal with the quiescent females phase, so as to describe the dynamics of invasion of aedes aegypti mosquitoes, which are divided into three subpopulations: eggs, pupae and female. We mainly investigate whether the time of quiescence (delay) in the females phase can induce Hopf bifurcation. By means of analyzing the eigenvalue spectrum, we show that the persistent positive equilibrium is asymptotically stable in the absence of time delay, but loses its stability via Hopf bifurcation when time delay crosses some critical value. Using normal form and center manifold theory, we investigate the stability of the bifurcating branches of periodic solutions and the direction of the Hopf bifurcation. Numerical simulations are carried out to support our theoretical results.

Conditions for the local and global asymptotic stability of the time–fractional Degn–Harrison system

2020 ◽  
Vol 21 (7-8) ◽  
pp. 749-759
Author(s):  
Rachida Mezhoud ◽  
Khaled Saoudi ◽  
Abderrahmane Zaraï ◽  
Salem Abdelmalek
Keyword(s):  
Asymptotic Stability ◽  
Global Asymptotic Stability ◽  
Lyapunov Method ◽  
Sufficient Conditions ◽  
Reaction Diffusion ◽  
Linearization Method ◽  
Direct Lyapunov Method ◽  
Fractional Systems ◽  
Reaction Diffusion Model ◽  
Theoretical Results

AbstractFractional calculus has been shown to improve the dynamics of differential system models and provide a better understanding of their dynamics. This paper considers the time–fractional version of the Degn–Harrison reaction–diffusion model. Sufficient conditions are established for the local and global asymptotic stability of the model by means of invariant rectangles, the fundamental stability theory of fractional systems, the linearization method, and the direct Lyapunov method. Numerical simulation results are used to illustrate the theoretical results.

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