Abstract 4425: Extracellular matrix segmentation combined with cell classification as a novel method for detailed tumor tissue mapping

Author(s):  
GEORGII VASIUKOV ◽  
Tatiana Novitskaya ◽  
Sergey Gutor ◽  
Anna Menshikh ◽  
Andries Zijlstra ◽  
...  
2014 ◽  
Vol 19 (8) ◽  
pp. 087005 ◽  
Author(s):  
Vidita Urboniene ◽  
Milda Pucetaite ◽  
Feliksas Jankevicius ◽  
Arunas Zelvys ◽  
Valdas Sablinskas ◽  
...  

2021 ◽  
Vol 8 ◽  
Author(s):  
Jun Kumai ◽  
Satoru Sasagawa ◽  
Masanobu Horie ◽  
Yoshihiro Yui

Mechanical stimulation by the extracellular matrix (ECM) controls physiological and pathological cellular responses, such as stem cell differentiation, organogenesis, and tumor progression. Polyacrylamide (PA) gels have been widely used to study cell-ECM mechanical interactions. Typically, sulfosuccinimidyl 6-(4′-azido-2′-nitrophenylamino)hexanoate (sulfo-SANPAH) is used as a protein crosslinker in these gels. However, its low solubility, unstable binding with proteins, and high cost are barriers to its application. The objective of this study was to improve and simplify the preparation of PA gels using an economical crosslinker, N-hydroxysuccinimide-acrylamide (NHS-AA) ester, to enable increased stability in protein coating. By exposing excess NHS to the gel surface, we found an optimal ratio of NHS-AA ester:AA to obtain NHS-AA ester-containing PA gels with a uniform ECM protein coating and stiffness similar to that of sulfo-SANPAH-containing PA gels. The biological behavior of MCF7 and MCF10A cells were similar on NHS-AA ester and sulfo-SANPAH gels. Acini formation in Matrigel overlay culture were also consistent on NHS-AA ester and sulfo-SANPAH gels. This novel PA gel preparation method using NHS-AA ester can effectively replace the sulfo-SANPAH method and will be immensely useful in the evaluation of cell-ECM mechanical interactions.


Cells ◽  
2019 ◽  
Vol 8 (2) ◽  
pp. 81 ◽  
Author(s):  
Marta Giussani ◽  
Tiziana Triulzi ◽  
Gabriella Sozzi ◽  
Elda Tagliabue

: In recent years, it has become increasingly evident that cancer cells and the local microenvironment are crucial in the development and progression of tumors. One of the major components of the tumor microenvironment is the extracellular matrix (ECM), which comprises a complex mixture of components, including proteins, glycoproteins, proteoglycans, and polysaccharides. In addition to providing structural and biochemical support to tumor tissue, the ECM undergoes remodeling that alters the biochemical and mechanical properties of the tumor microenvironment and contributes to tumor progression and resistance to therapy. A novel concept has emerged, in which tumor-driven ECM remodeling affects the release of ECM components into peripheral blood, the levels of which are potential diagnostic or prognostic markers for tumors. This review discusses the most recent evidence on ECM remodeling-derived signals that are detectable in the bloodstream, as new early diagnostic and risk prediction tools for the most frequent solid cancers.


2019 ◽  
Author(s):  
B. Kessel ◽  
M. Lee ◽  
A. Bonato ◽  
Y. Tinguely ◽  
E. Tosoratti ◽  
...  

AbstractHydrogels are an excellent biomimetic of the extracellular matrix and have found great use in tissue engineering. Nanoporous monolithic hydrogels have limited mass transport, restricting diffusion of key biomolecules. Structured microbead-hydrogels overcome some of these limitations, but suffer from lack of controlled anisotropy. Here we introduce a novel method for producing architected hydrogels based on entanglement of microstrands. The microstrands are mouldable and form a porous structure which is stable in water. Entangled microstrands are useable as bioinks for 3D bioprinting, where they align during the extrusion process. Cells co-printed with the microstrands show excellent viability and augmented matrix deposition resulting in a modulus increase from 2.7 kPa to 780.2 kPa after 6 weeks of culture. Entangled microstands are a new class of bioinks with unprecedented advantages in terms of scalability, material versatility, mass transport, showing foremost outstanding properties as a bioink for 3D printed tissue grafts.


2012 ◽  
Vol 2012 ◽  
pp. 1-11 ◽  
Author(s):  
Alina Toma ◽  
Andreas Mang ◽  
Tina A. Schuetz ◽  
Stefan Becker ◽  
Thorsten M. Buzug

A novel hybrid continuum-discrete model to simulate tumour growth on a cellular scale is proposed. The lattice-based spatiotemporal model consists of reaction-diffusion equations that describe interactions between cancer cells and their microenvironment. The fundamental ingredients that are typically considered are the nutrient concentration, the extracellular matrix (ECM), and matrix degrading enzymes (MDEs). The in vivo processes are very complex and occur on different levels. This in turn leads to huge computational costs. The main contribution of the present work is therefore to describe the processes on the basis of simplified mathematical approaches, which, at the same time, depict realistic results to understand the biological processes. In this work, we discuss if we have to simulate the MDE or if the degraded matrix can be estimated directly with respect to the cancer cell distribution. Additionally, we compare the results for modelling tumour growth using the common and our simplified approach, thereby demonstrating the advantages of the proposed method. Therefore, we introduce variations of the positioning of the nutrient delivering blood vessels and use different initializations of the ECM. We conclude that the novel method, which does not explicitly model the matrix degrading enzymes, provides means for a straightforward and fast implementation for modelling tumour growth.


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